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Escherichia coli Class Ib Ribonucleotide Reductase Contains a Dimanganese(III)-Tyrosyl Radical Cofactor in Vivo
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Tracking Flavin Conformations in Protein Crystal Structures with Raman Spectroscopy and QM/MM Calculations
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A rapid assay for CDP reductase activity in mammalian cell extracts
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The state of copper in stellacyanin and laccase from the lacquer tree Rhus vernicifera
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[20] Use of rapid kinetics methods to study the assembly of the diferric-tyrosyl radical cofactor of E. coli ribonucleotide reductase
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Generation of the R2 Subunit of Ribonucleotide Reductase by Intein Chemistry: Insertion of 3-Nitrotyrosine at Residue 356 as a Probe of the Radical Initiation Process
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Mn(II) Binding by the Anthracis Repressor from Bacillus anthracis
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Metal Binding Studies and EPR Spectroscopy of the Manganese Transport Regulator MntR
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Importance of the Maintenance Pathway in the Regulation of the Activity of Escherichia coli Ribonucleotide Reductase
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An Active Dimanganese(III)−Tyrosyl Radical Cofactor in Escherichia coli Class Ib Ribonucleotide Reductase
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Microscopic pKa Values of Escherichia coli Thioredoxin
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The Oxidized (3,3) State of Manganese Catalase. Comparison of Enzymes from Thermus thermophilus and Lactobacillus plantarum
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Site-Specific Insertion of 3-Aminotyrosine into Subunit α2 of E. coli Ribonucleotide Reductase: Direct Evidence for Involvement of Y 730 and Y 731 in Radical Propagation
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A Tyrosyl−Dimanganese Coupled Spin System is the Native Metalloradical Cofactor of the R2F Subunit of the Ribonucleotide Reductase of Corynebacterium ammoniagenes
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Manganous Phosphate Acts as a Superoxide Dismutase
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Construction of Escherichia coli K‐12 in‐frame, single‐gene knockout mutants: the Keio collection
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Promoter identification and expression analysis of Salmonella typhimurium and Escherichia coli nrdEF operons encoding one of two class I ribonucleotide reductases present in both bacteria
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Efficient growth inhibition of Bacillus anthracis by knocking out the ribonucleotide reductase tyrosyl radical
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NrdI, a flavodoxin involved in maintenance of the diferric-tyrosyl radical cofactor in Escherichia coli class Ib ribonucleotide reductase
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Probing in vivo Mn 2+ speciation and oxidative stress resistance in yeast cells with electron-nuclear double resonance spectroscopy
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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
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Host–pathogen interactions: Host resistance factor Nramp1 up-regulates the expression of Salmonella pathogenicity island-2 virulence genes
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A second class I ribonucleotide reductase in Enterobacteriaceae: characterization of the Salmonella typhimurium enzyme.
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Superoxide accelerates DNA damage by elevating free-iron levels
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The Manganese-containing Ribonucleotide Reductase ofCorynebacterium ammoniagenes Is a Class Ib Enzyme
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The Active Form of the R2F Protein of Class Ib Ribonucleotide Reductase from Corynebacterium ammoniagenesIs a Diferric Protein
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Expression Analysis of the nrdHIEF Operon fromEscherichia coli
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The Interaction of Mitochondrial Iron with Manganese Superoxide Dismutase
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Global Iron-dependent Gene Regulation in Escherichia coli
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In Vivo Requirement for Glutaredoxins and Thioredoxins in the Reduction of the Ribonucleotide Reductases of Escherichia coli
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A method for direct cloning of Fur-regulated genes: identification of seven new Fur-regulated loci in Escherichia coli
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Submicromolar hydrogen peroxide disrupts the ability of Fur protein to control free‐iron levels in Escherichia coli
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Manganese import is a key element of the OxyR response to hydrogen peroxide in Escherichia coli
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Ribonucleotide reductase of Brevibacterium ammoniagenes is a manganese enzyme
inferredcites →https://doi.org/10.1111/j.1742-4658.2010.07815.xopenalex-snapshot
High‐resolution crystal structures of the flavoprotein NrdI in oxidized and reduced states – an unusual flavodoxin
inferredcites →https://doi.org/10.1111/j.1742-4658.2010.07885.xopenalex-snapshot
Homologous expression of the nrdF gene of Corynebacterium ammoniagenes strain ATCC 6872 generates a manganese‐metallocofactor (R2F) and a stable tyrosyl radical (Y•) involved in ribonucleotide reduction
inferredcites →https://doi.org/10.1126/science.1060331openalex-snapshot
Femtomolar Sensitivity of Metalloregulatory Proteins Controlling Zinc Homeostasis
inferredcites →https://doi.org/10.1126/science.1103185openalex-snapshot
Accumulation of Mn(II) in Deinococcus radiodurans Facilitates Gamma-Radiation Resistance
inferredcites →https://doi.org/10.1126/science.1152449openalex-snapshot
Metal Chelation and Inhibition of Bacterial Growth in Tissue Abscesses
inferredcites →https://doi.org/10.1126/science.1190187openalex-snapshot
Structural Basis for Activation of Class Ib Ribonucleotide Reductase
inferredcites →https://doi.org/10.1126/science.287.5458.1655openalex-snapshot
Salmonella Pathogenicity Island 2-Dependent Evasion of the Phagocyte NADPH Oxidase
inferredcites →https://doi.org/10.1128/jb.00185-08openalex-snapshot
NrdI Essentiality for Class Ib Ribonucleotide Reduction in Streptococcus pyogenes
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Manganese and Defenses against Oxygen Toxicity in Lactobacillus plantarum
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Direct cloning of the trxB gene that encodes thioredoxin reductase
inferredcites →https://doi.org/10.1128/jb.187.5.1604-1611.2005openalex-snapshot
The Metal Permease ZupT from Escherichia coli Is a Transporter with a Broad Substrate Spectrum
inferredcites →https://doi.org/10.1146/annurev.biochem.75.103004.142443openalex-snapshot
Ribonucleotide Reductases
inferredcites →https://doi.org/10.1146/annurev.micro.60.080805.142149openalex-snapshot
Manganese Transport and the Role of Manganese in Virulence
inferredcites →https://doi.org/10.1186/1471-2164-10-589openalex-snapshot
RNRdb, a curated database of the universal enzyme family ribonucleotide reductase, reveals a high level of misannotation in sequences deposited to Genbank
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Ribonucleotide Reductases of Salmonella Typhimurium: Transcriptional Regulation and Differential Role in Pathogenesis
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Structural Insights into the Initiation of Free Radical Formation in the Class Ib Ribonucleotide Reductases in Mycobacteria
inferred← citeshttps://doi.org/10.2139/ssrn.4808936openalex-extracted
Structural Insights into the Initiation of Free Radical Formation in the Class Ib Ribonucleotide Reductases in Mycobacteria
inferred← citeshttps://doi.org/10.1002/1873-3468.14500openalex-snapshot
Protein metalation in a nutshell
inferred← citeshttps://doi.org/10.1002/9781119951438.eibc2480openalex-snapshot
Assembly of Dimanganese and Heterometallic Manganese Proteins
inferred← citeshttps://doi.org/10.1002/ange.202217076openalex-snapshot
Ein neuer Thiolat‐gebundener Dimangan‐Cluster als strukturelles und funktionales Modell der Class Ib Ribonukleotidreduktasen
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A New Thiolate‐Bound Dimanganese Cluster as a Structural and Functional Model for Class Ib Ribonucleotide Reductases
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High-frequency and high-field electron paramagnetic resonance (HFEPR): a new spectroscopic tool for bioinorganic chemistry
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The class Ib ribonucleotide reductase from Mycobacterium tuberculosis has two active R2F subunits
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Assembly of nonheme Mn/Fe active sites in heterodinuclear metalloproteins
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Ether cross-link formation in the R2-like ligand-binding oxidase
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Assembly of a heterodinuclear Mn/Fe cofactor is coupled to tyrosine–valine ether cross-link formation in the R2-like ligand-binding oxidase
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Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access
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The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron
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Host-imposed manganese starvation of invading pathogens: two routes to the same destination
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Structure-Function Relationships in Assembly of the Radical-Initiating Cofactors of Class Ia–e Ribonucleotide Reductases
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Paramagnetic resonance investigation of mono- and di-manganese-containing systems in biochemistry
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Overview of structurally homologous flavoprotein oxidoreductases containing the low Mr thioredoxin reductase-like fold – A functionally diverse group
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A conserved π-helix plays a key role in thermoadaptation of catalysis in the glycoside hydrolase family 4
inferred← citeshttps://doi.org/10.1016/j.cbpa.2010.12.001openalex-snapshot
Control of metallation and active cofactor assembly in the class Ia and Ib ribonucleotide reductases: diiron or dimanganese?
inferred← citeshttps://doi.org/10.1016/j.crstbi.2024.100157openalex-snapshot
Structural insights into the initiation of free radical formation in the Class Ib ribonucleotide reductases in Mycobacteria
inferred← citeshttps://doi.org/10.1016/j.ica.2019.03.029openalex-snapshot
Synthesis and properties of a heterobimetallic iron-manganese complex and its comparison with homobimetallic analogues
inferred← citeshttps://doi.org/10.1016/j.jbc.2021.101137openalex-snapshot
The periodic table of ribonucleotide reductases
inferred← citeshttps://doi.org/10.1016/j.jbc.2021.101374openalex-snapshot
Interchangeable utilization of metals: New perspectives on the impacts of metal ions employed in ancient and extant biomolecules
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Development of in-line anoxic small-angle X-ray scattering and structural characterization of an oxygen-sensing transcriptional regulator
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Symerythrin Structures at Atomic Resolution and the Origins of Rubrerythrins and the Ferritin-Like Superfamily
inferred← citeshttps://doi.org/10.1016/j.molcel.2011.09.021openalex-snapshot
Regulation of Ribonucleotide Reductase in Response to Iron Deficiency
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Formation of Hexacoordinate Mn(III) in Bacillus subtilis Oxalate Decarboxylase Requires Catalytic Turnover
inferred← citeshttps://doi.org/10.1021/acs.biochem.5c00316openalex-snapshot
A Structurally Divergent Class Ia Ribonucleotide Reductase from a Tick-Borne Pathogen
inferred← citeshttps://doi.org/10.1021/acs.biochem.6b00699openalex-snapshot
Activation of the Class Ib Ribonucleotide Reductase by a Flavodoxin Reductase in Bacillus cereus
inferred← citeshttps://doi.org/10.1021/acs.biochem.6c00369openalex-snapshot
Kinetically Divergent Dimanganese–Tyrosyl Radical Cofactor Assembly in Listeria monocytogenes Class I Ribonucleotide Reductase
inferred← citeshttps://doi.org/10.1021/acs.biochem.8b00247openalex-snapshot
Structural Basis for Superoxide Activation of Flavobacterium johnsoniae Class I Ribonucleotide Reductase and for Radical Initiation by Its Dimanganese Cofactor
inferred← citeshttps://doi.org/10.1021/acs.inorgchem.3c04163openalex-snapshot
Class Ib Ribonucleotide Reductases: Activation of a Peroxido-MnIIMnIII to Generate a Reactive Oxo-MnIIIMnIV Oxidant
inferred← citeshttps://doi.org/10.1021/acs.inorgchem.5b00699openalex-snapshot
X-ray Absorption and Emission Study of Dioxygen Activation by a Small-Molecule Manganese Complex
inferred← citeshttps://doi.org/10.1021/acs.jpcb.5b04067openalex-snapshot
Direct Measurement of the Radical Translocation Distance in the Class I Ribonucleotide Reductase from Chlamydia trachomatis
inferred← citeshttps://doi.org/10.1021/bi200348qopenalex-snapshot
Bacillus subtilis Class Ib Ribonucleotide Reductase Is a Dimanganese(III)-Tyrosyl Radical Enzyme
inferred← citeshttps://doi.org/10.1021/bi201925topenalex-snapshot
The Dimanganese(II) Site of Bacillus subtilis Class Ib Ribonucleotide Reductase
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A Radical Transfer Pathway in Spore Photoproduct Lyase
inferred← citeshttps://doi.org/10.1021/bi401056eopenalex-snapshot
Bacillus subtilis Class Ib Ribonucleotide Reductase: High Activity and Dynamic Subunit Interactions
inferred← citeshttps://doi.org/10.1021/cb400757hopenalex-snapshot
Crystal Structure of Bacillus cereus Class Ib Ribonucleotide Reductase Di-iron NrdF in Complex with NrdI
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Manganese and Microbial Pathogenesis: Sequestration by the Mammalian Immune System and Utilization by Microorganisms
inferred← citeshttps://doi.org/10.1021/ic3008427openalex-snapshot
Activation of Dimanganese Class Ib Ribonucleotide Reductase by Hydrogen Peroxide: Mechanistic Insights from Density Functional Theory
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Mechanism of Assembly of the Dimanganese-Tyrosyl Radical Cofactor of Class Ib Ribonucleotide Reductase: Enzymatic Generation of Superoxide Is Required for Tyrosine Oxidation via a Mn(III)Mn(IV) Intermediate
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Substrate-Triggered Addition of Dioxygen to the Diferrous Cofactor of Aldehyde-Deformylating Oxygenase to Form a Diferric-Peroxide Intermediate
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Evidence for a Di-μ-oxo Diamond Core in the Mn(IV)/Fe(IV) Activation Intermediate of Ribonucleotide Reductase from Chlamydia trachomatis
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Hydrogen Donation but not Abstraction by a Tyrosine (Y68) during Endoperoxide Installation by Verruculogen Synthase (FtmOx1)
inferred← citeshttps://doi.org/10.1039/c2mt20142aopenalex-snapshot
Metallation and mismetallation of iron and manganese proteins in vitro and in vivo: the class I ribonucleotide reductases as a case study
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Reaction landscape of a mononuclear Mn III –hydroxo complex with hydrogen peroxide
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Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical
inferred← citeshttps://doi.org/10.1074/jbc.m111.278119openalex-snapshot
NrdH-Redoxin Protein Mediates High Enzyme Activity in Manganese-reconstituted Ribonucleotide Reductase from Bacillus anthracis
inferred← citeshttps://doi.org/10.1074/jbc.m111.330365openalex-snapshot
Mononuclear Iron Enzymes Are Primary Targets of Hydrogen Peroxide Stress
inferred← citeshttps://doi.org/10.1074/jbc.m112.413427openalex-snapshot
Bacillus anthracis Thioredoxin Systems, Characterization and Role as Electron Donors for Ribonucleotide Reductase
inferred← citeshttps://doi.org/10.1074/jbc.m113.533554openalex-snapshot
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inferred← citeshttps://doi.org/10.1074/jbc.m113.533620openalex-snapshot
Genetic Characterization and Role in Virulence of the Ribonucleotide Reductases of Streptococcus sanguinis
inferred← citeshttps://doi.org/10.1074/jbc.m114.592535openalex-snapshot
Semiquinone-induced Maturation of Bacillus anthracis Ribonucleotide Reductase by a Superoxide Intermediate
inferred← citeshttps://doi.org/10.1074/jbc.m115.675223openalex-snapshot
Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor
inferred← citeshttps://doi.org/10.1074/jbc.r114.573675openalex-snapshot
Spore Photoproduct Lyase: The Known, the Controversial, and the Unknown
inferred← citeshttps://doi.org/10.1074/jbc.r114.596684openalex-snapshot
Choosing the Right Metal: Case Studies of Class I Ribonucleotide Reductases
inferred← citeshttps://doi.org/10.1074/jbc.ra119.010570openalex-snapshot
Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins
inferred← citeshttps://doi.org/10.1093/mtomcs/mfab062openalex-snapshot
Mechanistic studies of the cofactor assembly in class Ib ribonucleotide reductases and protein affinity for MnII and FeII
inferred← citeshttps://doi.org/10.1093/mtomcs/mfac058openalex-snapshot
Metalation calculators for E. coli strain JM109 (DE3): aerobic, anaerobic, and hydrogen peroxide exposed cells cultured in LB media
inferred← citeshttps://doi.org/10.1093/nar/gkz524openalex-snapshot
Metal sensing and regulation of adaptive responses to manganese limitation by MtsR is critical for group A streptococcus virulence
inferred← citeshttps://doi.org/10.1099/acmi.0.001204.v3openalex-snapshot
The metal-uptake-deficient Escherichia coli strain GR536 contains the ϕ80 prophage
inferred← citeshttps://doi.org/10.1111/j.1365-2958.2011.07593.xopenalex-snapshot
The alternative aerobic ribonucleotide reductase of Escherichia coli , NrdEF, is a manganese‐dependent enzyme that enables cell replication during periods of iron starvation
inferred← citeshttps://doi.org/10.1111/mmi.12364openalex-snapshot
Cooperative and allosterically controlled nucleotide binding regulates the DNA binding activity of NrdR
inferred← citeshttps://doi.org/10.1111/mmi.13034openalex-snapshot
Manganese homeostasis and utilization in pathogenic bacteria
inferred← citeshttps://doi.org/10.1128/iai.00762-19openalex-snapshot
The Manganese-Responsive Transcriptional Regulator MumR Protects Acinetobacter baumannii from Oxidative Stress
inferred← citeshttps://doi.org/10.1128/jb.05872-11openalex-snapshot
The Escherichia coli MntR Miniregulon Includes Genes Encoding a Small Protein and an Efflux Pump Required for Manganese Homeostasis
inferred← citeshttps://doi.org/10.1146/annurev-biochem-061408-095817openalex-snapshot
Class I Ribonucleotide Reductases: Metallocofactor Assembly and Repair In Vitro and In Vivo
inferred← citeshttps://doi.org/10.1371/journal.pgen.1004977openalex-snapshot
The Escherichia coli Small Protein MntS and Exporter MntP Optimize the Intracellular Concentration of Manganese
inferred← citeshttps://doi.org/10.1371/journal.pgen.1007462openalex-snapshot
The Hsp70 co-chaperone Ydj1/HDJ2 regulates ribonucleotide reductase activity
inferred← citeshttps://doi.org/10.1371/journal.pone.0046350openalex-snapshot
Biofilm Modifies Expression of Ribonucleotide Reductase Genes in Escherichia coli
inferred← citeshttps://doi.org/10.2210/pdb6oxj/pdbopenalex-snapshot
X-ray crystal structure of Y140F FtmOx1 bound to Fe(II)
inferred← citeshttps://doi.org/10.3109/10409238.2011.630372openalex-snapshot
DNA building blocks: keeping control of manufacture
inferred← citeshttps://doi.org/10.3389/fcimb.2023.943390openalex-snapshot
Why is manganese so valuable to bacterial pathogens?
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Functional Diversity of Homologous Oxidoreductases—Tuning of Substrate Specificity by a FAD-Stacking Residue for Iron Acquisition and Flavodoxin Reduction
inferred← citeshttps://doi.org/10.3390/ijms140713137openalex-snapshot
The Enzyme-Mediated Direct Reversal of a Dithymine Photoproduct in Germinating Endospores
inferred← citeshttps://doi.org/10.3390/molecules24132462openalex-snapshot
Formation of Unstable and very Reactive Chemical Species Catalyzed by Metalloenzymes: A Mechanistic Overview
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Faculty Opinions recommendation of A radical transfer pathway in spore photoproduct lyase.
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Characterisation of an Escherichia coli line that completely lacks ribonucleotide reduction yields insights into the evolution of parasitism and endosymbiosis
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