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MALDI IMS-Derived Molecular Contour Maps: Augmenting Histology Whole-Slide Images

https://doi.org/10.1021/jasms.2c00370
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/mas.21602openalex-snapshot
Unsupervised machine learning for exploratory data analysis in imaging mass spectrometry
inferredcites →https://doi.org/10.1002/mas.21795openalex-snapshot
Next‐generation pathology practices with mass spectrometry imaging
inferredcites →https://doi.org/10.1002/prca.201500140openalex-snapshot
MALDI mass spectrometry imaging: A cutting‐edge tool for fundamental and clinical histopathology
inferredcites →https://doi.org/10.1007/s13361-015-1147-5openalex-snapshot
MALDI FTICR IMS of Intact Proteins: Using Mass Accuracy to Link Protein Images with Proteomics Data
inferredcites →https://doi.org/10.1016/j.aca.2021.338522openalex-snapshot
Automated biomarker candidate discovery in imaging mass spectrometry data through spatially localized Shapley additive explanations
inferredcites →https://doi.org/10.1016/j.ijms.2014.04.021openalex-snapshot
Getting the picture: The coming of age of imaging MS
inferredcites →https://doi.org/10.1017/s1431927622006328openalex-snapshot
napari: a Python Multi-Dimensional Image Viewer Platform for the Research Community
inferredcites →https://doi.org/10.1021/ac502838topenalex-snapshot
Automated Anatomical Interpretation of Ion Distributions in Tissue: Linking Imaging Mass Spectrometry to Curated Atlases
inferredcites →https://doi.org/10.1021/ac504734sopenalex-snapshot
Mass Spectrometry Imaging in Drug Development
inferredcites →https://doi.org/10.1021/ac970888iopenalex-snapshot
Molecular Imaging of Biological Samples: Localization of Peptides and Proteins Using MALDI-TOF MS
inferredcites →https://doi.org/10.1021/acs.analchem.8b02885openalex-snapshot
Next Generation Histology-Directed Imaging Mass Spectrometry Driven by Autofluorescence Microscopy
inferredcites →https://doi.org/10.1021/acs.jproteome.2c00206openalex-snapshot
Rapid Multivariate Analysis Approach to Explore Differential Spatial Protein Profiles in Tissue
inferredcites →https://doi.org/10.1021/acsinfecdis.0c00647openalex-snapshot
Spatially Targeted Proteomics of the Host–Pathogen Interface during Staphylococcal Abscess Formation
inferredcites →https://doi.org/10.1021/cr3004295openalex-snapshot
Analysis of Tissue Specimens by Matrix-Assisted Laser Desorption/Ionization Imaging Mass Spectrometry in Biological and Clinical Research
inferredcites →https://doi.org/10.1038/44565openalex-snapshot
Learning the parts of objects by non-negative matrix factorization
inferredcites →https://doi.org/10.1038/nmeth.3296openalex-snapshot
Image fusion of mass spectrometry and microscopy: a multimodality paradigm for molecular tissue mapping
inferredcites →https://doi.org/10.1038/s41598-017-17204-5openalex-snapshot
QuPath: Open source software for digital pathology image analysis
inferredcites →https://doi.org/10.1038/s41598-021-83017-2openalex-snapshot
Embossed topographic depolarisation maps of biological tissues with different morphological structures
inferredcites →https://doi.org/10.1073/pnas.1913991116openalex-snapshot
Staphylococcus aureus exhibits heterogeneous siderophore production within the vertebrate host
inferredcites →https://doi.org/10.1093/bioinformatics/btv146openalex-snapshot
Cardinal : an R package for statistical analysis of mass spectrometry-based imaging experiments
inferredcites →https://doi.org/10.1093/nar/gkm324openalex-snapshot
LIPID MAPS online tools for lipid research
inferredcites →https://doi.org/10.1101/2021.07.16.452703openalex-snapshot
Automated Segmentation of Kidney Nephron Structures by Deep Learning Models on Label-free Autofluorescence Microscopy for Spatial Multi-omics Data Acquisition and Mining
inferredcites →https://doi.org/10.1109/mcse.2007.55openalex-snapshot
Matplotlib: A 2D Graphics Environment
inferredcites →https://doi.org/10.1126/scitranslmed.aan6361openalex-snapshot
Integrated molecular imaging reveals tissue heterogeneity driving host-pathogen interactions
inferredcites →https://doi.org/10.1162/neco_a_00168openalex-snapshot
Algorithms for Nonnegative Matrix Factorization with the β-Divergence
inferredcites →https://doi.org/10.1194/jlr.r800095-jlr200openalex-snapshot
Update of the LIPID MAPS comprehensive classification system for lipids
inferredcites →https://doi.org/10.3390/e21040353openalex-snapshot
Brain Complex Network Characteristic Analysis of Fatigue during Simulated Driving Based on Electroencephalogram Signals
inferredcites →https://doi.org/10.5281/zenodo.5518237openalex-snapshot
NHPatterson/wsireg: wsireg v0.3.0
inferredcites →https://doi.org/10.5281/zenodo.6562051openalex-snapshot
NHPatterson/napari-imsmicrolink: IMS MicroLink v0.1.7
inferredcites →https://doi.org/10.7717/peerj.453openalex-snapshot
scikit-image: image processing in Python

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4825115openalex-extracted
Stochastic Dynamics Mass Spectrometry of Caffeine Metabolites
inferred← citeshttps://doi.org/10.1002/admt.202400912openalex-snapshot
A Robust, Uniform, and Stable Glycerol Liquid Film Substrate for In Situ SERS Quantitative Investigation of Contaminant Distribution on Rough Surfaces
inferred← citeshttps://doi.org/10.1002/aidi.70134openalex-snapshot
Spatially Informed Feature Selection and Machine Learning in Matrix‐Assisted Laser Desorption/Ionization Imaging for Cohort‐Scale Molecular Tissue Phenomics in Glioblastoma
inferred← citeshttps://doi.org/10.1016/j.chembiol.2024.09.005openalex-snapshot
Uncovering lipid dynamics in Staphylococcus aureus osteomyelitis using multimodal imaging mass spectrometry
inferred← citeshttps://doi.org/10.1016/j.jddst.2025.107590openalex-snapshot
Organelle-targeted nanostructured lipid carriers: Strategic design, analytical validation, and translational insights for precision intracellular drug delivery
inferred← citeshttps://doi.org/10.1021/jasms.4c00219openalex-snapshot
Oversampling for Enhanced Spatial Resolution of Zebrafish by Top-Hat IR-MALDESI-MSI
inferred← citeshttps://doi.org/10.1101/2023.12.01.569690openalex-snapshot
In situ lipidomics of Staphylococcus aureus osteomyelitis using imaging mass spectrometry
inferred← citeshttps://doi.org/10.3390/cimb47100834openalex-snapshot
The Role of MALDI-TOF Mass Spectrometry in Photodynamic Therapy: From Photosensitizer Design to Clinical Applications
inferred← citeshttps://doi.org/10.3390/ijms25041995openalex-snapshot
Special Issue with Research Topics on “Recent Analysis and Applications of Mass Spectra on Biochemistry”
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