On the public citation graph
Allele-specific expression reveals interactions between genetic variation and environment
0 signed · 191 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/s100380200034openalex-snapshot
Contribution of Sp1 to initiation of transcription of angiotensinogen
inferredcites →https://doi.org/10.1016/j.ajpath.2013.02.045openalex-snapshot
Dual Effects of Exercise in Dysferlinopathy
inferredcites →https://doi.org/10.1016/j.cmet.2012.12.007openalex-snapshot
Genetic Control of Obesity and Gut Microbiota Composition in Response to High-Fat, High-Sucrose Diet in Mice
inferredcites →https://doi.org/10.1016/j.molmet.2014.02.002openalex-snapshot
Integrated physiology and systems biology of PPARα
inferredcites →https://doi.org/10.1016/s0140-6736(89)90828-3openalex-snapshot
EFFECTS OF CHANGES IN FAT, FISH, AND FIBRE INTAKES ON DEATH AND MYOCARDIAL REINFARCTION: DIET AND REINFARCTION TRIAL (DART)
inferredcites →https://doi.org/10.1038/nature12531openalex-snapshot
Transcriptome and genome sequencing uncovers functional variation in humans
inferredcites →https://doi.org/10.1038/nbt.3001openalex-snapshot
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
inferredcites →https://doi.org/10.1038/ng.2756openalex-snapshot
Systematic identification of trans eQTLs as putative drivers of known disease associations
inferredcites →https://doi.org/10.1038/ng.3162openalex-snapshot
Gene-gene and gene-environment interactions detected by transcriptome sequence analysis in twins
inferredcites →https://doi.org/10.1038/ng.3216openalex-snapshot
Recombination affects accumulation of damaging and disease-associated mutations in human populations
inferredcites →https://doi.org/10.1038/ng.3467openalex-snapshot
Fine-mapping cellular QTLs with RASQUAL and ATAC-seq
inferredcites →https://doi.org/10.1038/ng1589openalex-snapshot
An integrative genomics approach to infer causal associations between gene expression and disease
inferredcites →https://doi.org/10.1038/nmeth.3582openalex-snapshot
WASP: allele-specific software for robust molecular quantitative trait locus discovery
inferredcites →https://doi.org/10.1038/nrg2809openalex-snapshot
Missing heritability and strategies for finding the underlying causes of complex disease
inferredcites →https://doi.org/10.1073/pnas.0806883105openalex-snapshot
Gene expression changes in the course of normal brain aging are sexually dimorphic
inferredcites →https://doi.org/10.1073/pnas.1115761109openalex-snapshot
Deciphering the genetic architecture of variation in the immune response to Mycobacterium tuberculosis infection
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btp579openalex-snapshot
Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data
inferredcites →https://doi.org/10.1093/bioinformatics/btu802openalex-snapshot
QuASAR: quantitative allele-specific analysis of reads
inferredcites →https://doi.org/10.1093/nar/gkt1229openalex-snapshot
The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
inferredcites →https://doi.org/10.1097/01.jom.0000141668.70006.52openalex-snapshot
Longitudinal Decline in Lung Function: Evaluation of Interleukin-10 Genetic Polymorphisms in Firefighters
inferredcites →https://doi.org/10.1101/gr.086660.108openalex-snapshot
Genetic architecture of quantitative traits in mice, flies, and humans
inferredcites →https://doi.org/10.1101/gr.112623.110openalex-snapshot
Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data
inferredcites →https://doi.org/10.1101/gr.155192.113openalex-snapshot
Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals
inferredcites →https://doi.org/10.1111/j.1469-1809.2010.00572.xopenalex-snapshot
Permutation and Parametric Bootstrap Tests for Gene-Gene and Gene-Environment Interactions
inferredcites →https://doi.org/10.1126/science.1083968openalex-snapshot
Influence of Life Stress on Depression: Moderation by a Polymorphism in the 5-HTT Gene
inferredcites →https://doi.org/10.1126/science.1242429openalex-snapshot
Identification of Genetic Variants That Affect Histone Modifications in Human Cells
inferredcites →https://doi.org/10.1126/science.1246949openalex-snapshot
Innate Immune Activity Conditions the Effect of Regulatory Variants upon Monocyte Gene Expression
inferredcites →https://doi.org/10.1126/science.1246980openalex-snapshot
Common Genetic Variants Modulate Pathogen-Sensing Responses in Human Dendritic Cells
inferredcites →https://doi.org/10.1126/science.1251110openalex-snapshot
High-Resolution Genomic Analysis of Human Mitochondrial RNA Sequence Variation
inferredcites →https://doi.org/10.1126/science.1262110openalex-snapshot
The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
inferredcites →https://doi.org/10.1152/ajpheart.01291.2007openalex-snapshot
Disruption of the circadian clock within the cardiomyocyte influences myocardial contractile function, metabolism, and gene expression
inferredcites →https://doi.org/10.1161/circulationaha.107.737312openalex-snapshot
Randomized Trial of Genotype-Guided Versus Standard Warfarin Dosing in Patients Initiating Oral Anticoagulation
inferredcites →https://doi.org/10.1186/gb-2013-14-4-r36openalex-snapshot
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
inferredcites →https://doi.org/10.1186/gb-2013-14-7-r75openalex-snapshot
Gene expression changes with age in skin, adipose tissue, blood and brain
inferredcites →https://doi.org/10.1186/s13059-014-0467-2openalex-snapshot
Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studies
inferredcites →https://doi.org/10.1186/s13059-015-0762-6openalex-snapshot
Tools and best practices for data processing in allelic expression analysis
inferredcites →https://doi.org/10.1371/journal.pone.0001651openalex-snapshot
Gene Expression Signature of Cigarette Smoking and Its Role in Lung Adenocarcinoma Development and Survival
inferredcites →https://doi.org/10.1371/journal.pone.0049818openalex-snapshot
VNN1 Gene Expression Levels and the G-137T Polymorphism Are Associated with HDL-C Levels in Mexican Prepubertal Children
inferredcites →https://doi.org/10.1371/journal.pone.0068141openalex-snapshot
Normalizing RNA-Sequencing Data by Modeling Hidden Covariates with Prior Knowledge
inferredcites →https://doi.org/10.2337/db12-0222openalex-snapshot
Galectin-3 Deficiency Accelerates High-Fat Diet–Induced Obesity and Amplifies Inflammation in Adipose Tissue and Pancreatic Islets
inferredcites →https://doi.org/10.7554/elife.01381openalex-snapshot
Genetic interactions affecting human gene expression identified by variance association mapping
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.11646/zootaxa.5646.3.5zenodo-depositor-declared
Complete mitogenome and the phylogenetic status of Troglopedetes meridionalis Jantarit, Surakhamhaeng & Deharveng, 2020 (Collembola, Entomobryidae)
inferred← citeshttps://doi.org/10.1002/tpg2.20541openalex-snapshot
Exon disruptive variants in Populus trichocarpa associated with wood properties exhibit distinct gene expression patterns
inferred← citeshttps://doi.org/10.1002/wrna.1503openalex-snapshot
Environmental influences on RNA processing: Biochemical, molecular and genetic regulators of cellular response
inferred← citeshttps://doi.org/10.1007/s00414-025-03656-2openalex-snapshot
Application of RNA markers in forensic body fluid analysis: from specificity and stability to polymorphism
inferred← citeshttps://doi.org/10.1007/s11738-024-03726-9openalex-snapshot
Transcriptome analysis of fruit development and identification of key transcription factors related to anthocyanin pathway in cultivated octoploid strawberry
inferred← citeshttps://doi.org/10.1007/s12551-018-0435-2openalex-snapshot
Genomic approaches for the elucidation of genes and gene networks underlying cardiovascular traits
inferred← citeshttps://doi.org/10.1007/s13353-019-00485-zopenalex-snapshot
Analysis of allele-specific expression of seven candidate genes involved in lipid metabolism in pig skeletal muscle and fat tissues reveals allelic imbalance of ACACA, LEP, SCD, and TNF
inferred← citeshttps://doi.org/10.1016/j.ajhg.2019.07.016openalex-snapshot
Using Transcriptomic Hidden Variables to Infer Context-Specific Genotype Effects in the Brain
inferred← citeshttps://doi.org/10.1016/j.ajhg.2019.11.015openalex-snapshot
A Robust Method Uncovers Significant Context-Specific Heritability in Diverse Complex Traits
inferred← citeshttps://doi.org/10.1016/j.ajhg.2019.12.011openalex-snapshot
Allele-Specific QTL Fine Mapping with PLASMA
inferred← citeshttps://doi.org/10.1016/j.ajhg.2020.07.005openalex-snapshot
Detecting Allele-Specific Alternative Splicing from Population-Scale RNA-Seq Data
inferred← citeshttps://doi.org/10.1016/j.ajhg.2021.08.014openalex-snapshot
An integrated approach to identify environmental modulators of genetic risk factors for complex traits
inferred← citeshttps://doi.org/10.1016/j.ajhg.2021.09.008openalex-snapshot
Allele-specific epigenetic activity in prostate cancer and normal prostate tissue implicates prostate cancer risk mechanisms
inferred← citeshttps://doi.org/10.1016/j.ajhg.2023.11.013openalex-snapshot
Interaction molecular QTL mapping discovers cellular and environmental modifiers of genetic regulatory effects
inferred← citeshttps://doi.org/10.1016/j.biopsych.2022.09.033openalex-snapshot
Stem Cell Models for Context-Specific Modeling in Psychiatric Disorders
inferred← citeshttps://doi.org/10.1016/j.cell.2020.04.043openalex-snapshot
Molecular Choreography of Acute Exercise
inferred← citeshttps://doi.org/10.1016/j.cmet.2023.09.013openalex-snapshot
Functional interrogation of twenty type 2 diabetes-associated genes using isogenic human embryonic stem cell-derived β-like cells
inferred← citeshttps://doi.org/10.1016/j.coi.2020.05.005openalex-snapshot
Dissecting genetic determinants of variation in human immune responses
inferred← citeshttps://doi.org/10.1016/j.compbiomed.2025.110890openalex-snapshot
Allele-specific expression analysis: pipelines, applications, challenges, and unmet needs
inferred← citeshttps://doi.org/10.1016/j.compbiomed.2026.111920openalex-snapshot
Allele-specific expression modulates the immunological and cis-regulatory landscape of Parkinson's Disease
inferred← citeshttps://doi.org/10.1016/j.crmeth.2025.101141openalex-snapshot
Spatial dissimilarity analysis in single-cell transcriptomics
inferred← citeshttps://doi.org/10.1016/j.csbj.2019.11.011openalex-snapshot
Unzipping haplotypes in diploid and polyploid genomes
inferred← citeshttps://doi.org/10.1016/j.gde.2020.10.007openalex-snapshot
Allele-specific expression: applications in cancer and technical considerations
inferred← citeshttps://doi.org/10.1016/j.jmb.2021.166829openalex-snapshot
aScan: A Novel Method for the Study of Allele Specific Expression in Single Individuals
inferred← citeshttps://doi.org/10.1016/j.pnpbp.2018.11.010openalex-snapshot
Genomic updates in understanding PTSD
inferred← citeshttps://doi.org/10.1016/j.tig.2017.10.001openalex-snapshot
Functional Genomics of Host–Microbiome Interactions in Humans
inferred← citeshttps://doi.org/10.1016/j.tig.2018.03.007openalex-snapshot
The Evolution of Gene Expression in cis and trans
inferred← citeshttps://doi.org/10.1016/j.tig.2020.08.009openalex-snapshot
Where Are the Disease-Associated eQTLs?
inferred← citeshttps://doi.org/10.1016/j.tig.2024.07.003openalex-snapshot
Computational methods for allele-specific expression in single cells
inferred← citeshttps://doi.org/10.1016/j.tig.2026.01.010openalex-snapshot
Beyond the baseline: mapping the context-specific regulatory landscape of disease
inferred← citeshttps://doi.org/10.1038/s41374-020-0422-7openalex-snapshot
CpG-SNP site methylation regulates allele-specific expression of MTHFD1 gene in type 2 diabetes
inferred← citeshttps://doi.org/10.1038/s41398-022-01913-1openalex-snapshot
Allele-specific analysis reveals exon- and cell-type-specific regulatory effects of Alzheimer’s disease-associated genetic variants
inferred← citeshttps://doi.org/10.1038/s41467-017-01818-4openalex-snapshot
Genome-wide mapping of genetic determinants influencing DNA methylation and gene expression in human hippocampus
inferred← citeshttps://doi.org/10.1038/s41467-020-14457-zopenalex-snapshot
Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
inferred← citeshttps://doi.org/10.1038/s41467-021-21458-zopenalex-snapshot
Inflammation status modulates the effect of host genetic variation on intestinal gene expression in inflammatory bowel disease
inferred← citeshttps://doi.org/10.1038/s41467-023-42016-9openalex-snapshot
Single-cell allele-specific expression analysis reveals dynamic and cell-type-specific regulatory effects
inferred← citeshttps://doi.org/10.1038/s41467-023-43024-5openalex-snapshot
The transcriptional legacy of developmental stochasticity
inferred← citeshttps://doi.org/10.1038/s41467-024-45652-xopenalex-snapshot
A landscape of gene expression regulation for synovium in arthritis
inferred← citeshttps://doi.org/10.1038/s41467-024-55513-2openalex-snapshot
Statistical framework for calling allelic imbalance in high-throughput sequencing data
inferred← citeshttps://doi.org/10.1038/s41588-018-0089-9openalex-snapshot
Single-cell RNA sequencing identifies celltype-specific cis-eQTLs and co-expression QTLs
inferred← citeshttps://doi.org/10.1038/s41588-020-0579-4openalex-snapshot
Allele-specific expression changes dynamically during T cell activation in HLA and other autoimmune loci
inferred← citeshttps://doi.org/10.1038/s41588-022-01168-yopenalex-snapshot
Genetic determinants of chromatin reveal prostate cancer risk mediated by context-dependent gene regulation
inferred← citeshttps://doi.org/10.1038/s41588-024-01776-wopenalex-snapshot
Genotype × environment interactions in gene regulation and complex traits
inferred← citeshttps://doi.org/10.1038/s41598-021-86782-2openalex-snapshot
Muscle allele-specific expression QTLs may affect meat quality traits in Bos indicus
inferred← citeshttps://doi.org/10.1038/s43588-021-00092-1openalex-snapshot
Detecting context-dependent gene regulation
inferred← citeshttps://doi.org/10.1073/pnas.1820846116openalex-snapshot
Social history and exposure to pathogen signals modulate social status effects on gene regulation in rhesus macaques
inferred← citeshttps://doi.org/10.1073/pnas.2200551119openalex-snapshot
Microbiome-associated human genetic variants impact phenome-wide disease risk
inferred← citeshttps://doi.org/10.1093/aje/kwx229openalex-snapshot
Incorporation of Biological Knowledge Into the Study of Gene-Environment Interactions
inferred← citeshttps://doi.org/10.1093/bioinformatics/btab554openalex-snapshot
CHIT: an allele-specific method for testing the association between molecular quantitative traits and phenotype–genotype interaction
inferred← citeshttps://doi.org/10.1093/bioinformatics/btaf283openalex-snapshot
Bayesian estimation of allele-specific expression in the presence of phasing uncertainty
inferred← citeshttps://doi.org/10.1093/bioinformatics/btx598openalex-snapshot
QuASAR-MPRA: accurate allele-specific analysis for massively parallel reporter assays
inferred← citeshttps://doi.org/10.1093/bioinformatics/btx762openalex-snapshot
ASElux: an ultra-fast and accurate allelic reads counter
inferred← citeshttps://doi.org/10.1093/g3journal/jkab096openalex-snapshot
Testcrosses are an efficient strategy for identifying cis -regulatory variation: Bayesian analysis of allele-specific expression (BayesASE)
inferred← citeshttps://doi.org/10.1101/125195openalex-snapshot
Genetic control of age-related gene expression and complex traits in the human brain
inferred← citeshttps://doi.org/10.1101/2019.12.11.873265openalex-snapshot
The transcriptional legacy of developmental stochasticity
inferred← citeshttps://doi.org/10.1101/2020.05.21.107961openalex-snapshot
Cis acting variation is common, can propagates across multiple regulatory layers, but is often buffered in developmental programs
inferred← citeshttps://doi.org/10.1101/2021.07.03.450987openalex-snapshot
eQTL mapping using allele-specific gene expression
inferred← citeshttps://doi.org/10.1101/2021.07.08.451695openalex-snapshot
Allele-specific expression links diverse cis-regulatory mutations to recurrent gene dysregulation in high-risk neuroblastoma
inferred← citeshttps://doi.org/10.1101/2021.09.30.462672openalex-snapshot
Genetic control of the dynamic transcriptional response to immune stimuli and glucocorticoids at single cell resolution
inferred← citeshttps://doi.org/10.1101/2021.11.11.468278openalex-snapshot
A novel method to identify cell-type specific regulatory variants and their role in cancer risk
inferred← citeshttps://doi.org/10.1101/2021.12.01.470861openalex-snapshot
Detection of allele-specific expression in spatial transcriptomics with spASE
inferred← citeshttps://doi.org/10.1101/2022.08.12.503785openalex-snapshot
Detecting isoform-level allelic imbalance accounting for inferential uncertainty
inferred← citeshttps://doi.org/10.1101/2022.12.22.521678openalex-snapshot
Uncovering context-specific genetic-regulation of gene expression from single-cell RNA-sequencing using latent-factor models
inferred← citeshttps://doi.org/10.1101/2023.11.06.565672openalex-snapshot
Context Dependent Perturbation of Allelic Expression Imbalance Reveals Novel Candidate Therapeutic Targets for Metabolic diseases
inferred← citeshttps://doi.org/10.1101/2025.02.24.639687openalex-snapshot
A T2T-CHM13 recombination map and globally diverse haplotype reference panel improves phasing and imputation
inferred← citeshttps://doi.org/10.1101/599076openalex-snapshot
Linking Allele-Specific Expression And Natural Selection In Wild Populations
inferred← citeshttps://doi.org/10.1101/630996openalex-snapshot
Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
inferred← citeshttps://doi.org/10.1101/631150openalex-snapshot
Allelic imbalance reveals widespread germline-somatic regulatory differences and prioritizes risk loci in Renal Cell Carcinoma
inferred← citeshttps://doi.org/10.1101/gr.197897.115openalex-snapshot
Impact of the X Chromosome and sex on regulatory variation
inferred← citeshttps://doi.org/10.1101/gr.209759.116openalex-snapshot
High-throughput allele-specific expression across 250 environmental conditions
inferred← citeshttps://doi.org/10.1101/gr.266338.120openalex-snapshot
Cis -acting variation is common across regulatory layers but is often buffered during embryonic development
inferred← citeshttps://doi.org/10.1101/gr.276193.121openalex-snapshot
Genetic, epigenetic, and environmental mechanisms govern allele-specific gene expression
inferred← citeshttps://doi.org/10.1101/gr.276765.122openalex-snapshot
Genetic control of the dynamic transcriptional response to immune stimuli and glucocorticoids at single-cell resolution
inferred← citeshttps://doi.org/10.1109/ijcnn52387.2021.9533355openalex-snapshot
Impute Gene Expression Missing Values via Biological Networks: Optimal Fusion of Data and Knowledge
inferred← citeshttps://doi.org/10.1111/mec.15185openalex-snapshot
Genome structure predicts modular transcriptome responses to genetic and environmental conditions
inferred← citeshttps://doi.org/10.1111/tpj.15543openalex-snapshot
Large structural variations in the haplotype‐resolved African cassava genome
inferred← citeshttps://doi.org/10.1124/dmd.119.087312openalex-snapshot
Single Nucleotide Polymorphisms at a Distance from Aryl Hydrocarbon Receptor (AHR) Binding Sites Influence AHR Ligand–Dependent Gene Expression
inferred← citeshttps://doi.org/10.1126/sciadv.aeg3462openalex-snapshot
The landscape of allele-specific expression in human kidneys
inferred← citeshttps://doi.org/10.1126/science.aaw0040openalex-snapshot
Dynamic genetic regulation of gene expression during cellular differentiation
inferred← citeshttps://doi.org/10.1126/science.aba3066openalex-snapshot
The impact of sex on gene expression across human tissues
inferred← citeshttps://doi.org/10.1146/annurev-biodatasci-021621-122219openalex-snapshot
Perspectives on Allele-Specific Expression
inferred← citeshttps://doi.org/10.1146/annurev-biodatasci-122120-010010openalex-snapshot
Functional Characterization of Genetic Variant Effects on Expression
inferred← citeshttps://doi.org/10.1172/jci185102openalex-snapshot
Implications of gene × environment interactions in post-traumatic stress disorder risk and treatment
inferred← citeshttps://doi.org/10.1186/s12859-019-3141-6openalex-snapshot
Modeling allele-specific expression at the gene and SNP levels simultaneously by a Bayesian logistic mixed regression model
inferred← citeshttps://doi.org/10.1186/s12863-018-0696-6openalex-snapshot
Investigation of allele-specific expression of genes involved in adipogenesis and lipid metabolism suggests complex regulatory mechanisms of PPARGC1A expression in porcine fat tissues
inferred← citeshttps://doi.org/10.1186/s12864-020-06966-4openalex-snapshot
Genetic variants modulate gene expression statin response in human lymphoblastoid cell lines
inferred← citeshttps://doi.org/10.1186/s13059-019-1813-1openalex-snapshot
IMAGE: high-powered detection of genetic effects on DNA methylation using integrated methylation QTL mapping and allele-specific analysis
inferred← citeshttps://doi.org/10.1186/s13059-019-1840-yopenalex-snapshot
Genetic regulation of gene expression and splicing during a 10-year period of human aging
inferred← citeshttps://doi.org/10.1186/s13059-021-02593-8openalex-snapshot
scDALI: modeling allelic heterogeneity in single cells reveals context-specific genetic regulation
inferred← citeshttps://doi.org/10.1186/s13059-022-02640-yopenalex-snapshot
Allele-specific expression reveals genes with recurrent cis-regulatory alterations in high-risk neuroblastoma
inferred← citeshttps://doi.org/10.1186/s13059-022-02708-9openalex-snapshot
DeCAF: a novel method to identify cell-type specific regulatory variants and their role in cancer risk
inferred← citeshttps://doi.org/10.1186/s13059-023-03003-xopenalex-snapshot
SEESAW: detecting isoform-level allelic imbalance accounting for inferential uncertainty
inferred← citeshttps://doi.org/10.1186/s13059-023-03152-zopenalex-snapshot
SURGE: uncovering context-specific genetic-regulation of gene expression from single-cell RNA sequencing using latent-factor models
inferred← citeshttps://doi.org/10.1186/s13059-024-03317-4openalex-snapshot
Detection of allele-specific expression in spatial transcriptomics with spASE
inferred← citeshttps://doi.org/10.1186/s13073-018-0608-4openalex-snapshot
An integrative approach for building personalized gene regulatory networks for precision medicine
inferred← citeshttps://doi.org/10.1371/journal.pgen.1005650openalex-snapshot
A Flexible, Efficient Binomial Mixed Model for Identifying Differential DNA Methylation in Bisulfite Sequencing Data
inferred← citeshttps://doi.org/10.1371/journal.pgen.1006382openalex-snapshot
Local Adaptation of Sun-Exposure-Dependent Gene Expression Regulation in Human Skin
inferred← citeshttps://doi.org/10.1371/journal.pgen.1008009openalex-snapshot
Reverse GWAS: Using genetics to identify and model phenotypic subtypes
inferred← citeshttps://doi.org/10.1371/journal.pgen.1009080openalex-snapshot
Detecting cell-type-specific allelic expression imbalance by integrative analysis of bulk and single-cell RNA sequencing data
inferred← citeshttps://doi.org/10.1371/journal.pgen.1009666openalex-snapshot
Single-cell sequencing reveals lineage-specific dynamic genetic regulation of gene expression during human cardiomyocyte differentiation
inferred← citeshttps://doi.org/10.1371/journal.pgen.1009719openalex-snapshot
Transcription factor regulation of eQTL activity across individuals and tissues
inferred← citeshttps://doi.org/10.1371/journal.pgen.1010076openalex-snapshot
eQTL mapping using allele-specific count data is computationally feasible, powerful, and provides individual-specific estimates of genetic effects
inferred← citeshttps://doi.org/10.1371/journal.pgen.1010567openalex-snapshot
Using epigenomics to understand cellular responses to environmental influences in diseases
inferred← citeshttps://doi.org/10.1371/journal.pone.0195788openalex-snapshot
Interactions between genetic variation and cellular environment in skeletal muscle gene expression
inferred← citeshttps://doi.org/10.1530/ey.18.14.14openalex-snapshot
The impact of sex on gene expression across human tissues
inferred← citeshttps://doi.org/10.1534/g3.117.300139openalex-snapshot
Direct Testing for Allele-Specific Expression Differences Between Conditions
inferred← citeshttps://doi.org/10.1534/genetics.119.302419openalex-snapshot
Interpreting Coronary Artery Disease Risk Through Gene–Environment Interactions in Gene Regulation
inferred← citeshttps://doi.org/10.1542/peds.2020-1651openalex-snapshot
Genes, Environments, and Time: The Biology of Adversity and Resilience
inferred← citeshttps://doi.org/10.18240/ijo.2019.09.18openalex-snapshot
Myopia genetics in genome-wide association and post-genome-wide association study era
inferred← citeshttps://doi.org/10.21203/rs.3.rs-11078838/v1openalex-snapshot
Noncoding regulatory mutations contribute to the aberrant gene expression profile of neuroblastomas
inferred← citeshttps://doi.org/10.21203/rs.3.rs-3735302/v1openalex-snapshot
A pipeline for analysis of allele specific expression reveals salinity-dependent regulation in Nile tilapia
inferred← citeshttps://doi.org/10.21203/rs.3.rs-3967889/v1openalex-snapshot
RETRACTED: The effect of ischemia on expression quantitative trait loci (eQTL) in human myocardium and insights into myocardial injury etiology
inferred← citeshttps://doi.org/10.21203/rs.3.rs-3967889/v2openalex-snapshot
RETRACTED: The effect of ischemia on expression quantitative trait loci (eQTL) in human myocardium and insights into myocardial injury etiology
inferred← citeshttps://doi.org/10.32469/10355/90104openalex-snapshot
Statistical methods to deflect allele specific expression, alterations of allele specific expression and differential expression
inferred← citeshttps://doi.org/10.3389/fgene.2023.1157267openalex-snapshot
Exploration of genotype-by-environment interactions affecting gene expression responses in porcine immune cells
inferred← citeshttps://doi.org/10.3389/fgene.2023.1182579openalex-snapshot
Expression quantitative trait locus studies in the era of single-cell omics
inferred← citeshttps://doi.org/10.3389/fgene.2023.997383openalex-snapshot
RNA-seq data science: From raw data to effective interpretation
inferred← citeshttps://doi.org/10.3389/fpls.2021.739108openalex-snapshot
Selection and Evaluation of a Thornless and HLB-Tolerant Bud-Sport of Pummelo Citrus With an Emphasis on Molecular Mechanisms
inferred← citeshttps://doi.org/10.3390/cells15010081openalex-snapshot
Human Genome Safe Harbor Sites: A Comprehensive Review of Criteria, Discovery, Features, and Applications
inferred← citeshttps://doi.org/10.3390/f10010057openalex-snapshot
Genetic Variation of Growth Traits and Genotype-by-Environment Interactions in Clones of Catalpa bungei and Catalpa fargesii f. duclouxii
inferred← citeshttps://doi.org/10.3410/f.736057096.793563104openalex-snapshot
Faculty Opinions recommendation of Dynamic genetic regulation of gene expression during cellular differentiation.
inferred← citeshttps://doi.org/10.3410/f.736057096.793564084openalex-snapshot
Faculty Opinions recommendation of Dynamic genetic regulation of gene expression during cellular differentiation.
inferred← citeshttps://doi.org/10.3920/978-90-8686-940-4_509openalex-snapshot
509. Detection of genes influenced by environmentally responsive cis-regulatory variation in porcine immune cells
inferred← citeshttps://doi.org/10.48550/arxiv.1909.12550openalex-snapshot
Single-cell eQTLGen Consortium: a personalized understanding of disease
inferred← citeshttps://doi.org/10.6084/m9.figshare.20279464openalex-snapshot
Additional file 2 of DeCAF: a novel method to identify cell-type specific regulatory variants and their role in cancer risk
inferred← citeshttps://doi.org/10.6084/m9.figshare.20279467openalex-snapshot
Additional file 3 of DeCAF: a novel method to identify cell-type specific regulatory variants and their role in cancer risk
inferred← citeshttps://doi.org/10.6084/m9.figshare.26603719openalex-snapshot
Additional file 1 of SEESAW: detecting isoform-level allelic imbalance accounting for inferential uncertainty
inferred← citeshttps://doi.org/10.6084/m9.figshare.26603722openalex-snapshot
Additional file 2 of SEESAW: detecting isoform-level allelic imbalance accounting for inferential uncertainty
inferred← citeshttps://doi.org/10.6084/m9.figshare.26670819openalex-snapshot
Additional file 1 of SURGE: uncovering context-specific genetic-regulation of gene expression from single-cell RNA sequencing using latent-factor models
inferred← citeshttps://doi.org/10.6084/m9.figshare.26670822openalex-snapshot
Additional file 2 of SURGE: uncovering context-specific genetic-regulation of gene expression from single-cell RNA sequencing using latent-factor models
inferred← citeshttps://doi.org/10.6084/m9.figshare.26745761openalex-snapshot
Additional file 1 of Detection of allele-specific expression in spatial transcriptomics with spASE
inferred← citeshttps://doi.org/10.6084/m9.figshare.26745764openalex-snapshot
Additional file 2 of Detection of allele-specific expression in spatial transcriptomics with spASE
inferred← citeshttps://doi.org/10.6084/m9.figshare.26745767openalex-snapshot
Additional file 3 of Detection of allele-specific expression in spatial transcriptomics with spASE
inferred← citeshttps://doi.org/10.6084/m9.figshare.26745770openalex-snapshot
Additional file 4 of Detection of allele-specific expression in spatial transcriptomics with spASE
inferred← citeshttps://doi.org/10.6084/m9.figshare.26745773openalex-snapshot
Additional file 5 of Detection of allele-specific expression in spatial transcriptomics with spASE
inferred← citeshttps://doi.org/10.6084/m9.figshare.26745776openalex-snapshot
Additional file 6 of Detection of allele-specific expression in spatial transcriptomics with spASE
inferred← citeshttps://doi.org/10.64898/2026.01.20.694695openalex-snapshot
Choice of phenotype scale is critical in biobank-based G×E tests
inferred← citeshttps://doi.org/10.64898/2026.01.30.26344673openalex-snapshot
Host genotypes interact with microbial communities to modulate gene expression in the human intestine
inferred← citeshttps://doi.org/10.70675/8d0e3a18z3294z4502z870dz9c18564e6415openalex-snapshot
Computational analysis and modelling of regulatory networks controlling embryonic development
inferred← citeshttps://doi.org/10.7554/elife.33480openalex-snapshot
Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes
inferred← citeshttps://doi.org/10.7554/elife.52155openalex-snapshot
The single-cell eQTLGen consortium
inferred← citeshttps://doi.org/10.7554/elife.63852openalex-snapshot
Psychosocial experiences modulate asthma-associated genes through gene-environment interactions
inferred← citeshttps://doi.org/10.7554/elife.67077openalex-snapshot
Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions
inferred← citeshttps://doi.org/10.7554/elife.74970openalex-snapshot
The missing link between genetic association and regulatory function
inferred← citeshttps://doi.org/10.7554/elife.85235openalex-snapshot
Characterization of caffeine response regulatory variants in vascular endothelial cells
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.