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Autoimmune diseases — connecting risk alleles with molecular traits of the immune system

https://doi.org/10.1038/nrg.2015.33

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Gene-gene and gene-environment interactions detected by transcriptome sequence analysis in twins

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Statistical colocalization of genetic risk variants for related autoimmune diseases in the context of common controls

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Additive and interaction effects at three amino acid positions in HLA-DQ and HLA-DR molecules drive type 1 diabetes risk

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Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations

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A functional variant of lymphoid tyrosine phosphatase is associated with type I diabetes

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Population genomics of human gene expression

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Synovial fibroblasts spread rheumatoid arthritis to unaffected joints

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Meta-analysis of shared genetic architecture across ten pediatric autoimmune diseases

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Genetic control of the CD4/CD8 T-cell ratio in humans

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Quantum dot semiconductor nanocrystals for immunophenotyping by polychromatic flow cytometry

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Functional annotation of noncoding sequence variants

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Epigenome-wide association studies for common human diseases

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Cellular genomics for complex traits

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Standardizing immunophenotyping for the Human Immunology Project

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Immune cell profiling to guide therapeutic decisions in rheumatic diseases

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Genetic influence on peripheral blood T lymphocyte levels

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HIBAG—HLA genotype imputation with attribute bagging

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Association of the B-Cell Alloantigen DRw4 with Rheumatoid Arthritis

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Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants

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Interindividual variation in human T regulatory cells

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Twin concordance and sibling recurrence rates in multiple sclerosis

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A Missense Single-Nucleotide Polymorphism in a Gene Encoding a Protein Tyrosine Phosphatase (PTPN22) Is Associated with Rheumatoid Arthritis

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Genetic Association of the R620W Polymorphism of Protein Tyrosine Phosphatase PTPN22 with Human SLE

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Analysis of Families in the Multiple Autoimmune Disease Genetics Consortium (MADGC) Collection: the PTPN22 620W Allele Associates with Multiple Autoimmune Phenotypes

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Replication of Putative Candidate-Gene Associations with Rheumatoid Arthritis in >4,000 Samples from North America and Sweden: Association of Susceptibility with PTPN22, CTLA4, and PADI4

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Sibling Recurrence Risk in Autoimmune Thyroid Disease

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An integrative approach to predicting the functional effects of non-coding and coding sequence variation

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The CTLA-4 gene region of chromosome 2q33 is linked to, and associated with, type 1 diabetes. Belgian Diabetes Registry

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Seven newly identified loci for autoimmune thyroid disease

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Estimation and partitioning of (co)heritability of inflammatory bowel disease from GWAS and immunochip data

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Risk for ACPA-positive rheumatoid arthritis is driven by shared HLA amino acid polymorphisms in Asian and European populations

inferredcites →https://doi.org/10.1093/molbev/mst020openalex-snapshot

Crohn's Disease Loci Are Common Targets of Protozoa-Driven Selection

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ATHLATES: accurate typing of human leukocyte antigen through exome sequencing

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Recent advances in the genetics of rheumatoid arthritis

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Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus

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A cross-platform analysis of 14,177 expression quantitative trait loci derived from lymphoblastoid cell lines

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Combinatorial effects of multiple enhancer variants in linkage disequilibrium dictate levels of gene expression to confer susceptibility to common traits

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Complex interactions of transcription factors in mediating cytokine biology in T cells

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The HLA dictionary 2008: a summary of HLA‐A, ‐B, ‐C, ‐DRB1/3/4/5, and ‐DQB1 alleles and their association with serologically defined HLA‐A, ‐B, ‐C, ‐DR, and ‐DQ antigens

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Mast Cells: A Cellular Link Between Autoantibodies and Inflammatory Arthritis

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Rare Variants of IFIH1 , a Gene Implicated in Antiviral Responses, Protect Against Type 1 Diabetes

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Common Regulatory Variation Impacts Gene Expression in a Cell Type–Dependent Manner

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The Major Genetic Determinants of HIV-1 Control Affect HLA Class I Peptide Presentation

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A Systematic Survey of Loss-of-Function Variants in Human Protein-Coding Genes

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Multiplex Genome Engineering Using CRISPR/Cas Systems

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RNA-Guided Human Genome Engineering via Cas9

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Identification of Genetic Variants That Affect Histone Modifications in Human Cells

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Coordinated Effects of Sequence Variation on DNA Binding, Chromatin Structure, and Transcription

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Innate Immune Activity Conditions the Effect of Regulatory Variants upon Monocyte Gene Expression

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Common Genetic Variants Modulate Pathogen-Sensing Responses in Human Dendritic Cells

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Polarization of the Effects of Autoimmune and Neurodegenerative Risk Alleles in Leukocytes

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Impact of regulatory variation from RNA to protein

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Gene for Familial Psoriasis Susceptibility Mapped to the Distal End of Human Chromosome 17q

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Genetic variants associated with autoimmunity drive NFκB signaling and responses to inflammatory stimuli

inferredcites →https://doi.org/10.1146/annurev.immunol.26.021607.090244openalex-snapshot

Immunity to Citrullinated Proteins in Rheumatoid Arthritis

inferredcites →https://doi.org/10.1155/2015/326918openalex-snapshot

Luminex and Other Multiplex High Throughput Technologies for the Identification of, and Host Response to, Environmental Triggers of Type 1 Diabetes

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The United States to Africa lupus prevalence gradient revisited

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Twin studies and the heritability of MS: a conclusion

inferredcites →https://doi.org/10.1186/1471-2156-10-23openalex-snapshot

Disentangling molecular relationships with a causal inference test

inferredcites →https://doi.org/10.1186/1471-2164-15-325openalex-snapshot

Inference of high resolution HLA types using genome-wide RNA or DNA sequencing reads

inferredcites →https://doi.org/10.1186/ar113openalex-snapshot

Fibroblast biology. Role of synovial fibroblasts in the pathogenesis of rheumatoid arthritis.

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Promise and pitfalls of the Immunochip

inferredcites →https://doi.org/10.1186/gm396openalex-snapshot

Derivation of HLA types from shotgun sequence datasets

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HLAreporter: a tool for HLA typing from next generation sequencing data

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Targeted exon sequencing fails to identify rare coding variants with large effect in rheumatoid arthritis

inferredcites →https://doi.org/10.1210/jc.2004-1108openalex-snapshot

The Codon 620 Tryptophan Allele of the Lymphoid Tyrosine Phosphatase (LYP) Gene Is a Major Determinant of Graves’ Disease

inferredcites →https://doi.org/10.1210/jcem.86.2.7242openalex-snapshot

Evidence for a Major Role of Heredity in Graves’ Disease: A Population-Based Study of Two Danish Twin Cohorts1

inferredcites →https://doi.org/10.1371/journal.pbio.1000294openalex-snapshot

Rare Variants Create Synthetic Genome-Wide Associations

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Heritability and Tissue Specificity of Expression Quantitative Trait Loci

inferredcites →https://doi.org/10.1371/journal.pgen.1001273openalex-snapshot

Proteins Encoded in Genomic Regions Associated with Immune-Mediated Disease Physically Interact and Suggest Underlying Biology

inferredcites →https://doi.org/10.1371/journal.pgen.1002003openalex-snapshot

The Architecture of Gene Regulatory Variation across Multiple Human Tissues: The MuTHER Study

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Identification of Nine Novel Loci Associated with White Blood Cell Subtypes in a Japanese Population

inferredcites →https://doi.org/10.1371/journal.pgen.1002113openalex-snapshot

Multiple Loci Are Associated with White Blood Cell Phenotypes

inferredcites →https://doi.org/10.1371/journal.pgen.1002254openalex-snapshot

Pervasive Sharing of Genetic Effects in Autoimmune Disease

inferredcites →https://doi.org/10.1371/journal.pgen.1002300openalex-snapshot

Identification of Type 1 Diabetes–Associated DNA Methylation Variable Positions That Precede Disease Diagnosis

inferredcites →https://doi.org/10.1371/journal.pgen.1002431openalex-snapshot

Unraveling the Regulatory Mechanisms Underlying Tissue-Dependent Genetic Variation of Gene Expression

inferredcites →https://doi.org/10.1371/journal.pgen.1003000openalex-snapshot

The Contribution of RNA Decay Quantitative Trait Loci to Inter-Individual Variation in Steady-State Gene Expression Levels

inferredcites →https://doi.org/10.1371/journal.pgen.1003723openalex-snapshot

Deep Resequencing of GWAS Loci Identifies Rare Variants in CARD9, IL23R and RNF186 That Are Associated with Ulcerative Colitis

inferredcites →https://doi.org/10.1371/journal.pgen.1004404openalex-snapshot

Regulation of Gene Expression in Autoimmune Disease Loci and the Genetic Basis of Proliferation in CD4+ Effector Memory T Cells

inferredcites →https://doi.org/10.1371/journal.pgen.1004663openalex-snapshot

Methylation QTLs Are Associated with Coordinated Changes in Transcription Factor Binding, Histone Modifications, and Gene Expression Levels

inferredcites →https://doi.org/10.1371/journal.pgen.1004722openalex-snapshot

Integrating Functional Data to Prioritize Causal Variants in Statistical Fine-Mapping Studies

inferredcites →https://doi.org/10.1371/journal.pgen.1004958openalex-snapshot

Tissue-Specific Effects of Genetic and Epigenetic Variation on Gene Regulation and Splicing

inferredcites →https://doi.org/10.1371/journal.pgen.1005165openalex-snapshot

The Power of Gene-Based Rare Variant Methods to Detect Disease-Associated Variation and Test Hypotheses About Complex Disease

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Cross-Population Joint Analysis of eQTLs: Fine Mapping and Functional Annotation

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Imputing Amino Acid Polymorphisms in Human Leukocyte Antigens

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A Bayesian Method to Incorporate Hundreds of Functional Characteristics with Association Evidence to Improve Variant Prioritization

inferredcites →https://doi.org/10.1371/journal.pone.0122271openalex-snapshot

TYK2 Protein-Coding Variants Protect against Rheumatoid Arthritis and Autoimmunity, with No Evidence of Major Pleiotropic Effects on Non-Autoimmune Complex Traits

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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Patterns of T‐Cell Phenotypes in Rheumatic Diseases From Single‐Cell Studies of Tissue

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Polygenic Landscape of Cryptogenic New‐Onset Refractory Status Epilepticus: A Comprehensive Whole‐Genome Sequencing Study

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Antigen‐driven PD‐1 + TOX + BHLHE40 + and PD‐1 + TOX + EOMES + T lymphocytes regulate juvenile idiopathic arthritis in situ

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Human Leukocyte Antigen Genotyping of Idiopathic Subglottic Stenosis

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Status of Immune Oncology: Challenges and Opportunities

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Germline Genetics in Immuno-oncology: From Genome-Wide to Targeted Biomarker Strategies

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Systems-Wide Analyses of Immune Programming of Regulatory T Cells in Early Life Providing Lifelong Protection from Diseases

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A novel missense mutation in the AIRE gene underlying autoimmune polyglandular syndrome type 1

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Genetic determinants of immune-related adverse events in patients with melanoma receiving immune checkpoint inhibitors

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The role of socioeconomic status in the susceptibility to develop systemic lupus erythematosus in Mexican patients

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Association of NLRC4 inflammasome targeting Caspase1 to regulate monocyte pyroptosis involved in ankylosing spondylitis pathogenesis

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Cell-based therapies of autoimmune diseases in the context of artificial intelligence development

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Molecular determinants of the immunomodulatory potentials of a novel bifunctional TGF-β1/PD-L1 fusion protein

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Serum IgG Profiling of Toddlers Reveals a Subgroup with Elevated Seropositive Antibodies to Viruses Correlating with Increased Vaccine and Autoantigen Responses

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Mendelian Causes of Autoimmunity: the Lupus Phenotype

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Prevalence, incidence, and mortality of autoimmune diseases among adolescents and young adults in Mexico: an analysis based on the global burden of disease study 2021

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Comparative disease burden and trends of autoimmune diseases in China and G20 countries: an analysis of the global burden of disease study 2023

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Association of CD40 Gene Polymorphisms with Susceptibility to Neuromyelitis Optica Spectrum Disorders

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Immune dysregulation syndrome with de novo CTLA4 germline mutation responsive to abatacept therapy

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Long-Term Health Consequences of Endometriosis—Pathways and Mediation by Treatment

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General Features of Autoimmune Disease

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Precision health: A pragmatic approach to understanding and addressing key factors in autoimmune diseases

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Regulatory T cells suppress GM-CSF-producing T helper cells via IL-2 modulation to restrain immunopathology

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Increased frequency of the PTPN22W* variant in primary Sjogren's Syndrome: Association with low type I IFN scores

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Study of an extended family with CTLA-4 deficiency suggests a CD28/CTLA-4 independent mechanism responsible for differences in disease manifestations and severity

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Silica exposure and chronic virus infection synergistically promote lupus-like systemic autoimmunity in mice with low genetic predisposition

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Systemic lupus erythematosus as a genetic disease

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DNA-reactive B cells in lupus

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Biomarker-guided stratification of autoimmune patients for biologic therapy

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A holistic approach to understanding immune-mediated inflammatory diseases: bioinformatic tools to integrate omics data

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A phase 1b clinical trial to determine the safety, tolerability and immunogenicity of simian adenovirus and poxvirus vectored vaccines against a Mycobacterium avium complex subspecies in patients with active Crohn's disease

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Epidemiological and experimental evidence of environmental factor-related autoimmune thyroid disease: A systematic review

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Developments of PROTACs technology in immune-related diseases

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Conceptualization of population-specific human functional immune-genomics projects to identify factors that contribute to variability in immune and infectious diseases

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Immunogenetic factors in early immune control of human immunodeficiency virus type 1 (HIV-1) infection: Evaluation of HLA class I amino acid variants in two African populations

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Functional variants of TNFAIP3 are associated with systemic lupus erythematosus in a cohort of Chinese Han population

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Development and therapeutic assessment of bispecific nanobodies targeting B-cell activating factor and interleukin-17 for the neutralization of inflammatory mediators in autoimmune diseases

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Association between rs2294020 in X-linked CCDC22 and susceptibility to autoimmune diseases with focus on systemic lupus erythematosus

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Machine learning reveals sex-biased platelet-associated molecular signatures in systemic lupus erythematosus

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Causal role of peripheral immune cells in epilepsy: A large-scale genetic correlation study

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Germline genetic host factors as predictive biomarkers in immuno-oncology

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Histopathological Image QTL Discovery of Immune Infiltration Variants

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Expression level of risk genes of MHC class II is a susceptibility factor for autoimmunity: New insights

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GWAS and autoimmunity: What have we learned and what next

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Autoimmune associated HLAs and T cell autoantigens exhibit common patterns across several autoimmune diseases

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Interventional studies targeting the prodromal or preclinical phase of immune-mediated disease to benefit patient outcomes: a scoping review

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Genetic Landscape of Patients With Dilated Cardiomyopathy and a Systemic Immune-Mediated Disease

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Comorbid autoimmune disorders in people with multiple sclerosis: A retrospective cohort study

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Exploring the predictive power of antinuclear antibodies and Rheumatoid factor correlations in anticipating therapeutic outcomes for female patients with coexisting Sjögren's syndrome and Rheumatoid arthritis

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Identifying the culprits in neurological autoimmune diseases

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Pediatric autoimmune diseases in the light of COVID-19 pandemic, A retrospective observational big data study

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Mendelian randomization study of the causal relationship between autoimmune diseases and anemia using proteomic and genetic data

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An inflammation-associated lncRNA induces neuronal damage via mitochondrial dysfunction

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The potential of hyaluronic acid in immunoprotection and immunomodulation: Chemistry, processing and function

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Maladies auto-immunes et sclérose en plaques : le défi thérapeutique

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Integrative Approaches to Understanding the Pathogenic Role of Genetic Variation in Rheumatic Diseases

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The Contribution of Genetics and Epigenetics to Our Understanding of Health Disparities in Rheumatic Diseases

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CAR T-cell therapy in autoimmune diseases: Opportunities and challenges, with implications for RA

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Genome-wide classification of epigenetic activity reveals regions of enriched heritability in immune-related traits

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Functional genomics implicates natural killer cells in the pathogenesis of ankylosing spondylitis

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Tolerogenic antigen-specific vaccine induces VISTA-enriched regulatory T cells and protects against arthritis in DRB1∗04:01 mice

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Incidence, prevalence, and co-occurrence of autoimmune disorders over time and by age, sex, and socioeconomic status: a population-based cohort study of 22 million individuals in the UK

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Paediatric autoimmunity: from single entity to shared vulnerability

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Nanoparticle-Mediated Gene Therapy in Women’s Health: Progress, Delivery Challenges, and the Need for Sex, Age, and Ancestry Informed Design

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Connecting genetic risk to disease end points through the human blood plasma proteome

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Genetic variation in MHC proteins is associated with T cell receptor expression biases

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The multiple pathways to autoimmunity

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Network biology concepts in complex disease comorbidities

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The immunopathogenesis of seropositive rheumatoid arthritis: from triggering to targeting

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The yin and yang of co-inhibitory receptors: toward anti-tumor immunity without autoimmunity

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Food groups associated with immune-mediated inflammatory diseases: a Mendelian randomization and disease severity study

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CRISPR/cas9 mediated knockout of an intergenic variant rs6927172 identified IL-20RA as a new risk gene for multiple autoimmune diseases

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Genomic profiling of intestinal T-cell receptor repertoires in inflammatory bowel disease

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Structural basis of RIP2 activation and signaling

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A missense mutation in the MLKL brace region promotes lethal neonatal inflammation and hematopoietic dysfunction

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Single-cell RNA-sequencing of peripheral blood mononuclear cells reveals widespread, context-specific gene expression regulation upon pathogenic exposure

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An autoimmune pleiotropic SNP modulates IRF5 alternative promoter usage through ZBTB3-mediated chromatin looping

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A common human MLKL polymorphism confers resistance to negative regulation by phosphorylation

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Multi-trait analysis characterizes the genetics of thyroid function and identifies causal associations with clinical implications

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Non-coding autoimmune risk variant defines role for ICOS in T peripheral helper cell development

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Genome-wide meta-analysis of myasthenia gravis uncovers new loci and provides insights into polygenic prediction

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Germline genetic variation and predicting immune checkpoint inhibitor induced toxicity

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Molecular subtypes explain lupus epigenomic heterogeneity unveiling new regulatory genetic risk variants

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Antigen-driven T cell responses in rheumatic diseases: insights from T cell receptor repertoire studies

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Allele-specific expression changes dynamically during T cell activation in HLA and other autoimmune loci

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Linking regulatory variants to target genes by integrating single-cell multiome methods and genomic distance

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Massively parallel immunopeptidome by DNA sequencing provides insights into cancer antigen presentation

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Genome-wide association study and polygenic risk prediction of hypothyroidism

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Understanding the role of potential pathways and its components including hypoxia and immune system in case of oral cancer

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wSDTNBI: a novel network-based inference method for virtual screening

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OMEF biochip for evaluating red blood cell deformability using dielectrophoresis as a diagnostic tool for type 2 diabetes mellitus

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Review of Pulmonary Manifestations in Antisynthetase Syndrome

inferred← citeshttps://doi.org/10.1073/pnas.2011379118openalex-snapshot

The conserved autoimmune-disease risk gene TMEM39A regulates lysosome dynamics

inferred← citeshttps://doi.org/10.1073/pnas.2021570118openalex-snapshot

Central human B cell tolerance manifests with a distinctive cell phenotype and is enforced via CXCR4 signaling in hu-mice

inferred← citeshttps://doi.org/10.1080/08820139.2026.2729081openalex-snapshot

MSH5 Gene Polymorphisms Are Associated with Hashimoto’s Thyroiditis Susceptibility in a Chinese Han Population

inferred← citeshttps://doi.org/10.1093/discim/kyaf019openalex-snapshot

A pathogenic CD4 T cell phenotype in experimental uveitis shares common features with other immune mediated inflammatory diseases

inferred← citeshttps://doi.org/10.1093/ibd/izy109openalex-snapshot

Viewpoint: Toward the Genetic Architecture of Disease Severity in Inflammatory Bowel Diseases

inferred← citeshttps://doi.org/10.1093/ije/dyx181openalex-snapshot

Early predictors of Guillain-Barré syndrome in the life course of women

inferred← citeshttps://doi.org/10.1093/intimm/dxab026openalex-snapshot

Genetics and animal models of familial pulmonary fibrosis

inferred← citeshttps://doi.org/10.1093/rheumatology/kew417openalex-snapshot

Research and therapeutics—traditional and emerging therapies in systemic lupus erythematosus

inferred← citeshttps://doi.org/10.1097/bor.0000000000000555openalex-snapshot

Antisynthetase syndrome pathogenesis: knowledge and uncertainties

inferred← citeshttps://doi.org/10.1097/mcp.0000000000000598openalex-snapshot

Clustering of immune-mediated diseases in sarcoidosis

inferred← citeshttps://doi.org/10.1097/md.0000000000040893openalex-snapshot

The effects of coagulation factors on the risk of autoimmune diseases: A Mendelian randomization study

inferred← citeshttps://doi.org/10.1097/md.0000000000045218openalex-snapshot

Association between immune cells and breast cancer: A two-sample Mendelian randomization study

inferred← citeshttps://doi.org/10.1101/126730openalex-snapshot

Histopathological image QTL discovery of immune infiltration variants

inferred← citeshttps://doi.org/10.1101/140954openalex-snapshot

An amino acid motif in HLA-DRβ1 distinguishes patients with uveitis in juvenile idiopathic arthritis

inferred← citeshttps://doi.org/10.1101/2020.01.15.907436openalex-snapshot

Genetic associations at regulatory phenotypes improve fine-mapping of causal variants for twelve immune-mediated diseases

inferred← citeshttps://doi.org/10.1101/2021.06.04.447088openalex-snapshot

Single-cell RNA-sequencing reveals widespread personalized, context-specific gene expression regulation in immune cells

inferred← citeshttps://doi.org/10.1101/2022.09.08.507056openalex-snapshot

A common human MLKL polymorphism confers resistance to negative regulation by phosphorylation

inferred← citeshttps://doi.org/10.1101/2022.12.16.520733openalex-snapshot

Non-coding autoimmune risk variant accelerates T peripheral helper cell development via ICOS

inferred← citeshttps://doi.org/10.1101/2023.11.27.23299065openalex-snapshot

Causality between Peripheral Immune Cell Counts and Membranous Nephropathy: A Bidirectional Mendelian Randomization Study

inferred← citeshttps://doi.org/10.1101/2024.01.24.577048openalex-snapshot

Regulatory T cells control type 1-driven immunopathology restraining GM-CSF-producing helper T cells

inferred← citeshttps://doi.org/10.1101/2024.02.08.24302520openalex-snapshot

Genome-wide association study reveals different T cell distributions in peripheral blood of healthy individuals at high genetic risk of type 1 diabetes and long COVID

inferred← citeshttps://doi.org/10.1101/2025.05.22.25328104openalex-snapshot

A multi-omics resource of B cell activation reveals genetic mechanisms for immune-mediated diseases

inferred← citeshttps://doi.org/10.1101/262899openalex-snapshot

Integrative analysis of transcription factor occupancy at enhancers and disease risk loci in noncoding genomic regions

inferred← citeshttps://doi.org/10.1101/628370openalex-snapshot

Missense mutations in the MLKL ‘brace’ region lead to lethal neonatal inflammation in mice and are present in high frequency in humans

inferred← citeshttps://doi.org/10.1101/757997openalex-snapshot

Allele Specific Expression in Human – Genomic Makeup and Phenotypic Implications

inferred← citeshttps://doi.org/10.1111/bcp.14433openalex-snapshot

Evolving insights into the mechanisms of toxicity associated with immune checkpoint inhibitor therapy

inferred← citeshttps://doi.org/10.1111/clr.14440openalex-snapshot

Dental Implant Therapy in Patients With Autoimmune Diseases: A Scoping Review

inferred← citeshttps://doi.org/10.1111/imm.12796openalex-snapshot

Immunogenomic approaches to understand the function of immune disease variants

inferred← citeshttps://doi.org/10.1111/joim.20080openalex-snapshot

Clonal hematopoiesis of indeterminate potential and the risk of autoimmune diseases

inferred← citeshttps://doi.org/10.1126/science.adt3130openalex-snapshot

Chinese Immune Multi-Omics Atlas

inferred← citeshttps://doi.org/10.1128/jvi.01102-18openalex-snapshot

Extracellular Vesicles Released by Herpes Simplex Virus 1-Infected Cells Block Virus Replication in Recipient Cells in a STING-Dependent Manner

inferred← citeshttps://doi.org/10.1134/s0026893320040160openalex-snapshot

Noncoding Polymorphism rs6832151 Is an Attractive Candidate for Genome Editing Aimed at Finding New Molecular Mechanisms of Autoimmune Diseases

inferred← citeshttps://doi.org/10.1136/annrheumdis-2021-221267openalex-snapshot

Whole gut virome analysis of 476 Japanese revealed a link between phage and autoimmune disease

inferred← citeshttps://doi.org/10.1136/esmoopen-2018-000472openalex-snapshot

Susceptible loci associated with autoimmune disease as potential biomarkers for checkpoint inhibitor-induced immune-related adverse events

inferred← citeshttps://doi.org/10.1136/jitc-2024-008876openalex-snapshot

Advances in the understanding and therapeutic manipulation of cancer immune responsiveness: a Society for Immunotherapy of Cancer (SITC) review

inferred← citeshttps://doi.org/10.1146/annurev-genom-101422-100437openalex-snapshot

Methods and Insights from Single-Cell Expression Quantitative Trait Loci

inferred← citeshttps://doi.org/10.1146/annurev-immunol-082323-024638openalex-snapshot

Tracing the Evolution of Human Immunity Through Ancient DNA

inferred← citeshttps://doi.org/10.1155/2018/3491269openalex-snapshot

TNIP1 in Autoimmune Diseases: Regulation of Toll-like Receptor Signaling

inferred← citeshttps://doi.org/10.1155/2020/8838014openalex-snapshot

Some Common SNPs of the T‐Cell Homeostasis‐Related Genes Are Associated with Multiple Sclerosis, but Not with the Clinical Manifestations of the Disease, in the Polish Population

inferred← citeshttps://doi.org/10.1158/1055-9965.epi-21-0583openalex-snapshot

Overview of Research on Germline Genetic Variation in Immune Genes and Cancer Outcomes

inferred← citeshttps://doi.org/10.1158/2326-6066.cir-22-0565openalex-snapshot

Immunogenetic Metabolomics Reveals Key Enzymes That Modulate CAR T-cell Metabolism and Function

inferred← citeshttps://doi.org/10.11606/d.5.2019.tde-19022019-112809openalex-snapshot

Análise da contribuição do inflamassoma na patogênese da esclerose múltipla

inferred← citeshttps://doi.org/10.1172/jci131799openalex-snapshot

Haploidentical mixed chimerism cures autoimmunity in established type 1 diabetic mice

inferred← citeshttps://doi.org/10.1172/jci178692openalex-snapshot

IKZF1 and UBR4 gene variants drive autoimmunity and Th2 polarization in IgG4-related disease

inferred← citeshttps://doi.org/10.1177/17562864211035542openalex-snapshot

Treatment approaches to patients with multiple sclerosis and coexisting autoimmune disorders

inferred← citeshttps://doi.org/10.1177/20552076261475468openalex-snapshot

Integrating machine learning and epidemiology to reveal trends in the disease burden of youth-onset rheumatoid arthritis and gout in East Asia: From 1990 to 2050

inferred← citeshttps://doi.org/10.1182/blood.2020008196openalex-snapshot

Gray platelet syndrome: immunity goes awry

inferred← citeshttps://doi.org/10.1182/bloodadvances.2024014639openalex-snapshot

The role of genetic sequencing in the diagnostic workup for chronic immune thrombocytopenia

inferred← citeshttps://doi.org/10.1186/s12889-024-19290-3openalex-snapshot

Age-standardized incidence, prevalence, and mortality rates of autoimmune diseases in adolescents and young adults (15–39 years): an analysis based on the global burden of disease study 2021

inferred← citeshttps://doi.org/10.1186/s13046-020-01749-xopenalex-snapshot

The biomarkers related to immune related adverse events caused by immune checkpoint inhibitors

inferred← citeshttps://doi.org/10.1186/s13054-023-04763-5openalex-snapshot

Association of autoimmune diseases with the occurrence and 28-day mortality of sepsis: an observational and Mendelian randomization study

inferred← citeshttps://doi.org/10.1186/s13059-021-02569-8openalex-snapshot

Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

inferred← citeshttps://doi.org/10.1186/s13073-016-0384-yopenalex-snapshot

XGR software for enhanced interpretation of genomic summary data, illustrated by application to immunological traits

inferred← citeshttps://doi.org/10.1186/s13073-018-0558-xopenalex-snapshot

Disease-specific regulation of gene expression in a comparative analysis of juvenile idiopathic arthritis and inflammatory bowel disease

inferred← citeshttps://doi.org/10.1186/s13073-019-0652-8openalex-snapshot

Mechanisms of immune-related adverse events associated with immune checkpoint blockade: using germline genetics to develop a personalized approach

inferred← citeshttps://doi.org/10.1186/s13075-018-1721-xopenalex-snapshot

From association to mechanism in complex disease genetics: the role of the 3D genome

inferred← citeshttps://doi.org/10.1186/s13148-025-02041-5openalex-snapshot

Nutritional status-dependent DNA methylation modifications on adipose tissue in systemic lupus erythematosus women following folic acid and vitamin B12 supplementation: a randomized double-blind placebo-controlled trial

inferred← citeshttps://doi.org/10.1186/s40425-019-0602-4openalex-snapshot

Toward a comprehensive view of cancer immune responsiveness: a synopsis from the SITC workshop

inferred← citeshttps://doi.org/10.1371/journal.pgen.1006587openalex-snapshot

Genetic variants alter T-bet binding and gene expression in mucosal inflammatory disease

inferred← citeshttps://doi.org/10.1371/journal.pone.0180385openalex-snapshot

Autoimmunity and allergy control in adults submitted to complete thymectomy early in infancy

inferred← citeshttps://doi.org/10.1371/journal.pone.0185889openalex-snapshot

Genetic variation associated with cardiovascular risk in autoimmune diseases

inferred← citeshttps://doi.org/10.1371/journal.pone.0199979openalex-snapshot

Bank1 and NF-kappaB as key regulators in anti-nucleolar antibody development

inferred← citeshttps://doi.org/10.1515/jtim-2026-0031openalex-snapshot

Outcomes of patients with hematological malignancies complicated with autoimmune diseases after allogeneic hematopoietic stem cell transplantation: A ten-year real-world study

inferred← citeshttps://doi.org/10.15690/vramn1276openalex-snapshot

Hyperstimulation of the immune system as a cause of autoimmune diseases

inferred← citeshttps://doi.org/10.15789/1563-0625-rbv-1904openalex-snapshot

Relationship between various pathways of cellular death at distinct stages of ontogenesis in normal state and systemic diseases of connective tissue

inferred← citeshttps://doi.org/10.2139/ssrn.5361476openalex-snapshot

Association between Questionnaire-Based and Accelerometer-Based Physical Activity and the Incidence of Autoimmunity Diseases Using Data from UK Biobank: A Prospective Cohort Study

inferred← citeshttps://doi.org/10.2147/btt.s452792openalex-snapshot

TNFSF13B rs9514828 C>T Polymorphism is Associated with Incidence of Atherosclerosis and Therapeutic Outcomes in Patients with Systemic Lupus Erythematosus

inferred← citeshttps://doi.org/10.2147/ijnrd.s146355openalex-snapshot

Takayasu’s disease effects on the kidneys: current perspectives

inferred← citeshttps://doi.org/10.2174/1386207324666210804124416openalex-snapshot

Role of Potential COVID-19 Immune System Associated Genes and the Potential Pathways Linkage with Type-2 Diabetes

inferred← citeshttps://doi.org/10.31857/s0026898420040175openalex-snapshot

Некодирующий полиморфизм rs6832151 ‒ перспективный кандидат для геномного редактирования с целью поиска новых механизмов развития аутоиммунных заболеваний

inferred← citeshttps://doi.org/10.33612/diss.255266474openalex-snapshot

Context matters

inferred← citeshttps://doi.org/10.3384/9789180753968openalex-snapshot

Network-based biomarker discovery for multiple sclerosis

inferred← citeshttps://doi.org/10.3389/fendo.2021.641888openalex-snapshot

In-Silico Study of Immune System Associated Genes in Case of Type-2 Diabetes With Insulin Action and Resistance, and/or Obesity

inferred← citeshttps://doi.org/10.3389/fendo.2021.649863openalex-snapshot

Immune Checkpoint Inhibitors-Related Thyroid Dysfunction: Epidemiology, Clinical Presentation, Possible Pathogenesis, and Management

inferred← citeshttps://doi.org/10.3389/fimmu.2017.00453openalex-snapshot

Helminth Immunomodulation in Autoimmune Disease

inferred← citeshttps://doi.org/10.3389/fimmu.2018.01630openalex-snapshot

Potential Pathways Associated With Exaggerated T Follicular Helper Response in Human Autoimmune Diseases

inferred← citeshttps://doi.org/10.3389/fimmu.2019.00121openalex-snapshot

Evidence for Innate and Adaptive Immune Responses in a Cohort of Intractable Pediatric Epilepsy Surgery Patients

inferred← citeshttps://doi.org/10.3389/fimmu.2019.00261openalex-snapshot

Aberrant Expressions of Co-stimulatory and Co-inhibitory Molecules in Autoimmune Diseases

inferred← citeshttps://doi.org/10.3389/fimmu.2019.02813openalex-snapshot

Current State of Precision Medicine in Primary Systemic Vasculitides

inferred← citeshttps://doi.org/10.3389/fimmu.2020.00472openalex-snapshot

The Emerging Jamboree of Transformative Therapies for Autoimmune Diseases

inferred← citeshttps://doi.org/10.3389/fimmu.2020.00792openalex-snapshot

Prospects of the Use of Cell Therapy to Induce Immune Tolerance

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