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Distinctive roles of age, sex, and genetics in shaping transcriptional variation of human immune responses to microbial challenges

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Complement Receptor 1 Gene Variants Are Associated with Erythrocyte Sedimentation Rate

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Genetic Ancestry and Natural Selection Drive Population Differences in Immune Responses to Pathogens

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A Functional Genomics Approach to Understand Variation in Cytokine Production in Humans

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Host and Environmental Factors Influencing Individual Human Cytokine Responses

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Standardized Whole-Blood Transcriptional Profiling Enables the Deconvolution of Complex Induced Immune Responses

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Differential Effects of Environmental and Genetic Factors on T and B Cell Immune Traits

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Defective Signaling in the JAK-STAT Pathway Tracks with Chronic Inflammation and Cardiovascular Risk in Aging Humans

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Gene expression becomes heterogeneous with age

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Genomic modulators of gene expression in human neutrophils

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Genetic association analyses implicate aberrant regulation of innate and adaptive immunity genes in the pathogenesis of systemic lupus erythematosus

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Human immune system variation

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inferredcites →https://doi.org/10.1126/science.aad9417openalex-snapshot

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inferredcites →https://doi.org/10.1186/1471-2105-11-134openalex-snapshot

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inferredcites →https://doi.org/10.1186/s13073-015-0186-7openalex-snapshot

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inferredcites →https://doi.org/10.1371/journal.pgen.1005111openalex-snapshot

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Milieu Intérieur

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Milieu intérieur: Defining the boundaries of a healthy immune response for improved vaccination strategies

inferred← citeshttps://doi.org/10.1080/21645515.2020.1818519openalex-snapshot

The role of the thymus in COVID-19 disease severity: implications for antibody treatment and immunization

inferred← citeshttps://doi.org/10.1093/brain/awz074openalex-snapshot

Transcriptomic and genetic analyses reveal potential causal drivers for intractable partial epilepsy

inferred← citeshttps://doi.org/10.1093/cid/ciaa1562openalex-snapshot

Immune Profiling Enables Stratification of Patients With Active Tuberculosis Disease or Mycobacteriu m tuberculosis Infection

inferred← citeshttps://doi.org/10.1093/discim/kyae001openalex-snapshot

Deciphering the relationship between temperature and immunity

inferred← citeshttps://doi.org/10.1093/ecco-jcc/jjad166openalex-snapshot

Baseline Expression of Immune Gene Modules in Blood is Associated With Primary Response to Anti-TNF Therapy in Crohn’s Disease Patients

inferred← citeshttps://doi.org/10.1093/emph/eoy027openalex-snapshot

Influenza, evolution, and the next pandemic

inferred← citeshttps://doi.org/10.1093/femsre/fuaa060openalex-snapshot

The impact of the Fungus-Host-Microbiota interplay uponCandida albicansinfections: current knowledge and new perspectives

inferred← citeshttps://doi.org/10.1093/infdis/jiab422openalex-snapshot

Sex Differences in Influenza: The Challenge Study Experience

inferred← citeshttps://doi.org/10.1093/oxfimm/iqaf006openalex-snapshot

Decoding sex differences in human immunity through systems immunology

inferred← citeshttps://doi.org/10.1097/md.0000000000042861openalex-snapshot

Review of hydatid cyst cases and causes of recurrences complicating treatment, a 7-year cross-sectional study from Turkey: A single-center, retrospective observational study

inferred← citeshttps://doi.org/10.1098/rsob.190221openalex-snapshot

A practical view of fine-mapping and gene prioritization in the post-genome-wide association era

inferred← citeshttps://doi.org/10.1101/19011999openalex-snapshot

Genetic variation near CXCL12 is associated with susceptibility to HIV-related non-Hodgkin lymphoma

inferred← citeshttps://doi.org/10.1101/2020.01.22.915025openalex-snapshot

Human immune system variation during one year

inferred← citeshttps://doi.org/10.1101/2020.04.26.20081182openalex-snapshot

Integrated analysis of bulk multi omic and single-cell sequencing data confirms the molecular origin of hemodynamic changes in Covid-19 infection explaining coagulopathy and higher geriatric mortality

inferred← citeshttps://doi.org/10.1101/2020.12.21.423830openalex-snapshot

Single-cell RNA-sequencing reveals pervasive but highly cell type-specific genetic ancestry effects on the response to viral infection

inferred← citeshttps://doi.org/10.1101/2020.12.23.424147openalex-snapshot

Single cell analysis of blood mononuclear cells stimulated through CD3 and CD28 shows collateral activation of B and NK cells and demise of monocytes

inferred← citeshttps://doi.org/10.1101/2021.11.04.467311openalex-snapshot

Diverse environmental perturbations reveal the evolution and context-dependency of genetic effects on gene expression levels

inferred← citeshttps://doi.org/10.1101/2022.05.10.491413openalex-snapshot

Epigenetic variation impacts ancestry-associated differences in the transcriptional response to influenza infection

inferred← citeshttps://doi.org/10.1101/2024.03.06.583674openalex-snapshot

The effect of altitude on the expression of immune-related genes in Peruvian rural indigenous

inferred← citeshttps://doi.org/10.1101/581298openalex-snapshot

Immune profiling in M. tuberculosis infection enables stratification of patients with active disease

inferred← citeshttps://doi.org/10.1101/711911openalex-snapshot

Vaccine-induced ICOS+CD38+ cTfh are sensitive biosensors of age-related changes in inflammatory pathways

inferred← citeshttps://doi.org/10.1101/gr.276430.121openalex-snapshot

Diverse environmental perturbations reveal the evolution and context-dependency of genetic effects on gene expression levels

inferred← citeshttps://doi.org/10.1111/imcb.12789openalex-snapshot

Impact of socioeconomic status on healthy immune responses in humans

inferred← citeshttps://doi.org/10.1111/imr.13329openalex-snapshot

Shaping immunity: The influence of natural selection on population immune diversity

inferred← citeshttps://doi.org/10.1111/jeb.14181openalex-snapshot

Understanding the evolution of immune genes in jawed vertebrates

inferred← citeshttps://doi.org/10.1111/tan.13598openalex-snapshot

Characterising the genetic basis of immune response variation to identify causal mechanisms underlying disease susceptibility

inferred← citeshttps://doi.org/10.1111/trf.18342openalex-snapshot

Altered DNA methylation of the ABO gene is associated with differential plasma levels of von willebrand factor and E‐selectin

inferred← citeshttps://doi.org/10.1126/sciadv.adu0419openalex-snapshot

Systems analysis unravels a common rural-urban gradient in immunological profile, function, and metabolic dependencies

inferred← citeshttps://doi.org/10.1126/sciadv.aed8930openalex-snapshot

Variability in the TLR3 type I interferon pathway is predictive of RNA vaccine responses

inferred← citeshttps://doi.org/10.1126/scitranslmed.adt4605openalex-snapshot

Longitudinally stable T cell function and innate immune activation distinguish healthy adult immunotypes

inferred← citeshttps://doi.org/10.1128/9781683670261.ch12openalex-snapshot

Salmonella Single-Cell Metabolism and Stress Responses in Complex Host Tissues

inferred← citeshttps://doi.org/10.1128/iai.00283-22openalex-snapshot

Sex and Gender Differences in Bacterial Infections

inferred← citeshttps://doi.org/10.1128/iai.00472-24openalex-snapshot

Infection-induced trained immunity: a twist in paradigm of innate host defense and generation of immunological memory

inferred← citeshttps://doi.org/10.1128/microbiolspec.bai-0009-2019openalex-snapshot

Salmonella Single-Cell Metabolism and Stress Responses in Complex Host Tissues

inferred← citeshttps://doi.org/10.1128/msystems.00840-26openalex-snapshot

Age-adjusted machine learning identifies facial skin microbes associated with skin quality among Korean women

inferred← citeshttps://doi.org/10.1146/annurev-immunol-082323-024638openalex-snapshot

Tracing the Evolution of Human Immunity Through Ancient DNA

inferred← citeshttps://doi.org/10.1146/annurev-immunol-090122-042631openalex-snapshot

Systems Human Immunology and AI: Immune Setpoint and Immune Health

inferred← citeshttps://doi.org/10.1152/physrev.00026.2024openalex-snapshot

Sex, hormones, and lung health

inferred← citeshttps://doi.org/10.1155/2019/4103819openalex-snapshot

Sex-Related Differences in Immune Response and Symptomatic Manifestations to Infection with Leishmania Species

inferred← citeshttps://doi.org/10.1155/2022/4685288openalex-snapshot

Serum Cytokine Alterations Associated with Age of Patients with Nephropathia Epidemica

inferred← citeshttps://doi.org/10.1159/000503141openalex-snapshot

Precision Medicine and Vaccination of Older Adults: From Reactive to Proactive (A Mini-Review)

inferred← citeshttps://doi.org/10.1159/000510385openalex-snapshot

Immune Modulation in Lung Cancer: Current Concepts and Future Strategies

inferred← citeshttps://doi.org/10.1159/000530172openalex-snapshot

Effect of Age and Sex on Gene Expression-Based Radiation Biodosimetry Using Mouse Peripheral Blood

inferred← citeshttps://doi.org/10.1172/jci.insight.122998openalex-snapshot

Sex differences in IL-17 contribute to chronicity in male versus female urinary tract infection

inferred← citeshttps://doi.org/10.1172/jci.insight.176963openalex-snapshot

Coordinated immune dysregulation in juvenile dermatomyositis revealed by single-cell genomics

inferred← citeshttps://doi.org/10.1172/jci179822openalex-snapshot

Myeloid cell genome-wide screen identifies variants associated with Mycobacterium tuberculosis–induced cytokine transcriptional responses

inferred← citeshttps://doi.org/10.1177/09612033241281891openalex-snapshot

Alterations of the microbiome across body sites in systemic lupus erythematosus: A systematic review and meta-analysis

inferred← citeshttps://doi.org/10.1186/s12974-019-1569-2openalex-snapshot

Acute peripheral immune activation alters cytokine expression and glial activation in the early postnatal rat brain

inferred← citeshttps://doi.org/10.1186/s12979-020-00183-zopenalex-snapshot

The lethal sex gap: COVID-19

inferred← citeshttps://doi.org/10.1186/s13059-021-02471-3openalex-snapshot

Regulatory regions in natural transposable element insertions drive interindividual differences in response to immune challenges in Drosophila

inferred← citeshttps://doi.org/10.1186/s13072-021-00428-1openalex-snapshot

Risk-focused differences in molecular processes implicated in SARS-CoV-2 infection: corollaries in DNA methylation and gene expression

inferred← citeshttps://doi.org/10.1186/s13073-018-0584-8openalex-snapshot

Advanced model systems and tools for basic and translational human immunology

inferred← citeshttps://doi.org/10.1186/s13073-021-00907-wopenalex-snapshot

Impact of rare and common genetic variation in the interleukin-1 pathway on human cytokine responses

inferred← citeshttps://doi.org/10.1186/s13073-022-01032-yopenalex-snapshot

Integrative genetic and immune cell analysis of plasma proteins in healthy donors identifies novel associations involving primary immune deficiency genes

inferred← citeshttps://doi.org/10.1186/s13293-021-00387-yopenalex-snapshot

Sexual dimorphism of monocyte transcriptome in individuals with chronic low-grade inflammation

inferred← citeshttps://doi.org/10.1371/journal.pgen.1010567openalex-snapshot

Using epigenomics to understand cellular responses to environmental influences in diseases

inferred← citeshttps://doi.org/10.1371/journal.pone.0225289openalex-snapshot

Two common disease-associated TYK2 variants impact exon splicing and TYK2 dosage

inferred← citeshttps://doi.org/10.1371/journal.ppat.1014184openalex-snapshot

Detailed single-cell mapping of the transcriptional response to a virus infection driven by copy-back viral genomes

inferred← citeshttps://doi.org/10.14264/uql.2020.64openalex-snapshot

The impact of asthma, toll-like receptors 7 and 8, genetic and clinical determinants on antiviral immune response

inferred← citeshttps://doi.org/10.14336/ad.2020.1211openalex-snapshot

Global Sex Disparity of COVID-19: A Descriptive Review of Sex Hormones and Consideration for the Potential Therapeutic Use of Hormone Replacement Therapy in Older Adults

inferred← citeshttps://doi.org/10.18174/532060openalex-snapshot

Natural variation in viral susceptibility of Caenorhabditis elegans

inferred← citeshttps://doi.org/10.2147/itt.s241064openalex-snapshot

Immunoinformatics and Vaccine Development: An Overview

inferred← citeshttps://doi.org/10.31631/2073-3046-2021-20-6-88-99openalex-snapshot

On the Road to Individualization of Vaccination: the Significance of Age and Sex

inferred← citeshttps://doi.org/10.31718/2077-1096.21.4.184openalex-snapshot

EFFECT OF ANDROGENS ON IMMUNE CELLS

inferred← citeshttps://doi.org/10.3233/jpd-202417openalex-snapshot

Expression of Transcription Factors in CD4 + T Cells as Potential Biomarkers of Motor Complications in Parkinson’s Disease

inferred← citeshttps://doi.org/10.3324/haematol.2020.247023openalex-snapshot

Genetic variation near CXCL12 is associated with susceptibility to HIV-related non-Hodgkin lymphoma

inferred← citeshttps://doi.org/10.3389/fcimb.2021.758331openalex-snapshot

Balancing Selection of the Intracellular Pathogen Response in Natural Caenorhabditis elegans Populations

inferred← citeshttps://doi.org/10.3389/fgene.2019.01204openalex-snapshot

Exploring the RNA Gap for Improving Diagnostic Yield in Primary Immunodeficiencies

inferred← citeshttps://doi.org/10.3389/fgene.2021.713230openalex-snapshot

From GWAS to Gene: Transcriptome-Wide Association Studies and Other Methods to Functionally Understand GWAS Discoveries

inferred← citeshttps://doi.org/10.3389/fgene.2023.1274637openalex-snapshot

PLEX.I: a tool to discover features in multiplex networks that reflect clinical variation

inferred← citeshttps://doi.org/10.3389/fimmu.2018.02367openalex-snapshot

Immune Functional Assays, From Custom to Standardized Tests for Precision Medicine

inferred← citeshttps://doi.org/10.3389/fimmu.2019.00382openalex-snapshot

Anti-TNF Therapy in Spondyloarthritis and Related Diseases, Impact on the Immune System and Prediction of Treatment Responses

inferred← citeshttps://doi.org/10.3389/fimmu.2019.00432openalex-snapshot

Monocyte HLA-DR Assessment by a Novel Point-of-Care Device Is Feasible for Early Identification of ICU Patients With Complicated Courses—A Proof-of-Principle Study

inferred← citeshttps://doi.org/10.3389/fimmu.2019.01983openalex-snapshot

HIV Infection Is Associated With Downregulation of BTLA Expression on Mycobacterium tuberculosis-Specific CD4 T Cells in Active Tuberculosis Disease

inferred← citeshttps://doi.org/10.3389/fimmu.2020.519383openalex-snapshot

Androgen Receptor Signaling Positively Regulates Monocytic Development

inferred← citeshttps://doi.org/10.3389/fimmu.2020.569331openalex-snapshot

Unveiling Interindividual Variability of Human Fibroblast Innate Immune Response Using Robust Cell-Based Protocols

inferred← citeshttps://doi.org/10.3389/fimmu.2020.580373openalex-snapshot

Systems Biology Methods Applied to Blood and Tissue for a Comprehensive Analysis of Immune Response to Hepatitis B Vaccine in Adults

inferred← citeshttps://doi.org/10.3389/fimmu.2021.636720openalex-snapshot

Single Cell Analysis of Blood Mononuclear Cells Stimulated Through Either LPS or Anti-CD3 and Anti-CD28

inferred← citeshttps://doi.org/10.3389/fimmu.2021.685768openalex-snapshot

Corrigendum: Unveiling Interindividual Variability of Human Fibroblast Innate Immune Response Using Robust Cell-Based Protocols

inferred← citeshttps://doi.org/10.3389/fimmu.2021.757249openalex-snapshot

Type I Interferon and the Spectrum of Susceptibility to Viral Infection and Autoimmune Disease: A Shared Genomic Signature

inferred← citeshttps://doi.org/10.3389/fimmu.2021.768189openalex-snapshot

Single-Cell and Bulk RNA-Sequencing Reveal Differences in Monocyte Susceptibility to Influenza A Virus Infection Between Africans and Europeans

inferred← citeshttps://doi.org/10.3389/fimmu.2022.897193openalex-snapshot

Tuberculosis alters immune-metabolic pathways resulting in perturbed IL-1 responses

inferred← citeshttps://doi.org/10.3389/fimmu.2022.902232openalex-snapshot

Multi-Modal Single-Cell Sequencing Identifies Cellular Immunophenotypes Associated With Juvenile Dermatomyositis Disease Activity

inferred← citeshttps://doi.org/10.3389/fimmu.2024.1490593openalex-snapshot

The histamine analogue clobenpropit modulates IRF7 phosphorylation and interferon production by targeting CXCR4 in systemic lupus erythematosus models

inferred← citeshttps://doi.org/10.3389/fimmu.2025.1707727openalex-snapshot

A fundamental relationship between TCR diversity, repertoire size and systemic clonal expansion: insights from 30,000 TCRβ repertoires

inferred← citeshttps://doi.org/10.3390/biology15141187openalex-snapshot

Beyond the Human Binary: Decoding Hormone-Immune Plasticity in Transgender Health

inferred← citeshttps://doi.org/10.3390/biomedicines10112732openalex-snapshot

Genomic and Immune Approach in Platinum Refractory HPV-Negative Head and Neck Squamous Cell Carcinoma Patients Treated with Immunotherapy: A Novel Combined Profile

inferred← citeshttps://doi.org/10.3390/cells11213521openalex-snapshot

Neutrophil Extracellular Traps in Asthma: Friends or Foes?

inferred← citeshttps://doi.org/10.3390/cells12050762openalex-snapshot

Application of Digital Holographic Microscopy to Analyze Changes in T-Cell Morphology in Response to Bacterial Challenge

inferred← citeshttps://doi.org/10.3390/cells14221779openalex-snapshot

The Gut Microbiome as a Biomarker and Therapeutic Target of Immune Checkpoint Inhibitors: A Review for Oncologists

inferred← citeshttps://doi.org/10.3390/children8111070openalex-snapshot

Novel Biomarkers Differentiating Viral from Bacterial Infection in Febrile Children: Future Perspectives for Management in Clinical Praxis

inferred← citeshttps://doi.org/10.3390/ijms23095107openalex-snapshot

Global Noncoding microRNA Profiling in Mice Infected with Partial Human Mouth Microbes (PAHMM) Using an Ecological Time-Sequential Polybacterial Periodontal Infection (ETSPPI) Model Reveals Sex-Specific Differential microRNA Expression

inferred← citeshttps://doi.org/10.3390/ijms241512119openalex-snapshot

Challenges of Diagnosing Mendelian Susceptibility to Mycobacterial Diseases in South Africa

inferred← citeshttps://doi.org/10.3390/jpm15110552openalex-snapshot

The Gut Microbiome in Early-Onset Colorectal Cancer: Distinct Signatures, Targeted Prevention and Therapeutic Strategies

inferred← citeshttps://doi.org/10.3390/microorganisms12040775openalex-snapshot

The Impact of Immune System Aging on Infectious Diseases

inferred← citeshttps://doi.org/10.3390/pathogens11121531openalex-snapshot

Progress of the COVID-19: Persistence, Effectiveness, and Immune Escape of the Neutralizing Antibody in Convalescent Serum

inferred← citeshttps://doi.org/10.3390/pharmaceutics17101296openalex-snapshot

Polyglutamic Acid as an Antiviral Agent: Mechanistic and Structural Insights

inferred← citeshttps://doi.org/10.34057/ppj.2024.43.01.2023-10-11openalex-snapshot

Restorative effects of myricetin and hyaluronic acid on vaginal epithelial atrophy in ovariectomized rats

inferred← citeshttps://doi.org/10.36253/978-88-6453-896-9openalex-snapshot

Good Health, Quality Education, Sustainable Communities, Human Rights

inferred← citeshttps://doi.org/10.4000/books.cdf.11407openalex-snapshot

Une histoire génétique : notre diversité, notre évolution, notre adaptation

inferred← citeshttps://doi.org/10.4049/jimmunol.2000133openalex-snapshot

Seasonal and Nonseasonal Longitudinal Variation of Immune Function

inferred← citeshttps://doi.org/10.4103/apjtm.apjtm_14_24openalex-snapshot

Comparative analysis of pulmonary and extrapulmonary tuberculosis: A seven-year experience from a refugee host country, Turkiye

inferred← citeshttps://doi.org/10.4329/wjr.v13.i1.1openalex-snapshot

Exploration of sex-specific and age-dependent COVID-19 fatality rate in Bangladesh population

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