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Genetic variation near CXCL12 is associated with susceptibility to HIV-related non-Hodgkin lymphoma

https://doi.org/10.1101/19011999

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.ajhg.2010.11.011openalex-snapshot

GCTA: A Tool for Genome-wide Complex Trait Analysis

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Genome-wide Association Study Identifies Five Susceptibility Loci for Follicular Lymphoma outside the HLA Region

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A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping

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Role of CXCL12 and CXCR4 in the pathogenesis of hematological malignancies

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The role of CXCL12 in tumor microenvironment

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Effect of immunodeficiency, HIV viral load, and antiretroviral therapy on the risk of individual malignancies (FHDH-ANRS CO4): a prospective cohort study

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Common variants on 14q32 and 13q12 are associated with DLBCL susceptibility

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Integrating common and rare genetic variation in diverse human populations

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Transcriptome and genome sequencing uncovers functional variation in humans

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Genetic effects on gene expression across human tissues

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Variation at 3p24.1 and 6q23.3 influences the risk of Hodgkin’s lymphoma

inferredcites →https://doi.org/10.1038/ncomms6751openalex-snapshot

A genome-wide association study of marginal zone lymphoma shows association to the HLA region

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Genome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia

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Genome-wide association study of B cell non-Hodgkin lymphoma identifies 3q27 as a susceptibility locus in the Chinese population

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Advantages and pitfalls in the application of mixed-model association methods

inferredcites →https://doi.org/10.1038/ng.3105openalex-snapshot

Genome-wide association study identifies multiple susceptibility loci for diffuse large B cell lymphoma

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Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C

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A reference panel of 64,976 haplotypes for genotype imputation

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Reference-based phasing using the Haplotype Reference Consortium panel

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Genetic variants at 6p21.33 are associated with susceptibility to follicular lymphoma

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Genome-wide association study of follicular lymphoma identifies a risk locus at 6p21.32

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Principal components analysis corrects for stratification in genome-wide association studies

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The impact of host genetic variation on infection with HIV-1

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Transcriptional analysis of HIV-specific CD8+ T cells shows that PD-1 inhibits T cell function by upregulating BATF

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Predicting effects of noncoding variants with deep learning–based sequence model

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Genome-wide association studies of cancer: current insights and future perspectives

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Distinctive roles of age, sex, and genetics in shaping transcriptional variation of human immune responses to microbial challenges

inferredcites →https://doi.org/10.1093/bioinformatics/btq559openalex-snapshot

Robust relationship inference in genome-wide association studies

inferredcites →https://doi.org/10.1093/bioinformatics/btu014openalex-snapshot

Efficient haplotype matching and storage using the positional Burrows–Wheeler transform (PBWT)

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CHiCP: a web-based tool for the integrative and interactive visualization of promoter capture Hi-C datasets

inferredcites →https://doi.org/10.1093/bioinformatics/btw615openalex-snapshot

Improved methods for multi-trait fine mapping of pleiotropic risk loci

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Risk of AIDS-Defining Cancers Among HIV-1–Infected Patients in France Between 1992 and 2009: Results From the FHDH-ANRS CO4 Cohort

inferredcites →https://doi.org/10.1093/ije/dyp321openalex-snapshot

Cohort Profile: The Swiss HIV Cohort Study

inferredcites →https://doi.org/10.1093/jnci/dji072openalex-snapshot

Cancer Risk in the Swiss HIV Cohort Study: Associations With Immunodeficiency, Smoking, and Highly Active Antiretroviral Therapy

inferredcites →https://doi.org/10.1093/jnci/djr516openalex-snapshot

Genome-Wide Association Study of Classical Hodgkin Lymphoma and Epstein–Barr Virus Status–Defined Subgroups

inferredcites →https://doi.org/10.1093/jnci/dju503openalex-snapshot

Excess Cancers Among HIV-Infected People in the United States

inferredcites →https://doi.org/10.1093/jnci/djx249openalex-snapshot

Differences in Virological and Immunological Risk Factors for Non-Hodgkin and Hodgkin Lymphoma

inferredcites →https://doi.org/10.1093/nar/gkx1126openalex-snapshot

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

inferredcites →https://doi.org/10.1097/coh.0000000000000025openalex-snapshot

Factors contributing to risk for cancer among HIV-infected individuals, and evidence that earlier combination antiretroviral therapy will alter this risk

inferredcites →https://doi.org/10.1097/qad.0000000000001652openalex-snapshot

Outcomes for HIV-associated diffuse large B-cell lymphoma in the modern combined antiretroviral therapy era

inferredcites →https://doi.org/10.1097/qad.0b013e328329216aopenalex-snapshot

Non-0002030-defining malignancies in HIV-infected persons: etiologic puzzles, epidemiologic perils, prevention opportunities

inferredcites →https://doi.org/10.1101/164343openalex-snapshot

GAS Power Calculator: web-based power calculator for genetic association studies

inferredcites →https://doi.org/10.1126/science.aaw0040openalex-snapshot

Dynamic genetic regulation of gene expression during cellular differentiation

inferredcites →https://doi.org/10.1182/blood-2004-03-0799openalex-snapshot

Chemokine receptor expression in EBV-associated lymphoproliferation in hu/SCID mice: implications for CXCL12/CXCR4 axis in lymphoma generation

inferredcites →https://doi.org/10.1182/blood-2011-03-339630openalex-snapshot

Multiple Hodgkin lymphoma–associated loci within the HLA region at chromosome 6p21.3

inferredcites →https://doi.org/10.1182/blood.v93.6.1838.406k39_1838_1842openalex-snapshot

Chemokine and Chemokine Receptor Gene Variants and Risk of Non-Hodgkin’s Lymphoma in Human Immunodeficiency Virus-1–Infected Individuals

inferredcites →https://doi.org/10.1186/2047-217x-4-1openalex-snapshot

SmileFinder: a resampling-based approach to evaluate signatures of selection from genome-wide sets of matching allele frequency data in two or more diploid populations

inferredcites →https://doi.org/10.1186/2047-783x-16-3-101openalex-snapshot

Cancer risk in HIV-infected individuals on HAART is largely attributed to oncogenic infections and state of immunocompetence

inferredcites →https://doi.org/10.1186/s13059-016-0992-2openalex-snapshot

CHiCAGO: robust detection of DNA looping interactions in Capture Hi-C data

inferredcites →https://doi.org/10.1186/s13059-018-1519-9openalex-snapshot

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

inferredcites →https://doi.org/10.1186/s13059-019-1671-xopenalex-snapshot

BRB-seq: ultra-affordable high-throughput transcriptomics enabled by bulk RNA barcoding and sequencing

inferredcites →https://doi.org/10.1186/s13742-015-0047-8openalex-snapshot

Second-generation PLINK: rising to the challenge of larger and richer datasets

inferredcites →https://doi.org/10.1371/journal.pgen.1000791openalex-snapshot

Common Genetic Variation and the Control of HIV-1 in Humans

inferredcites →https://doi.org/10.1371/journal.pgen.1003220openalex-snapshot

Susceptibility Loci Associated with Specific and Shared Subtypes of Lymphoid Malignancies

inferredcites →https://doi.org/10.1371/journal.pmed.0040096openalex-snapshot

HIV Patients Developing Primary CNS Lymphoma Lack EBV-Specific CD4+ T Cell Function Irrespective of Absolute CD4+ T Cell Counts

inferredcites →https://doi.org/10.1371/journal.pone.0003907openalex-snapshot

Distinct Genetic Loci Control Plasma HIV-RNA and Cellular HIV-DNA Levels in HIV-1 Infection: The ANRS Genome Wide Association 01 Study

inferredcites →https://doi.org/10.1371/journal.pone.0089791openalex-snapshot

Pleiotropy of Cancer Susceptibility Variants on the Risk of Non-Hodgkin Lymphoma: The PAGE Consortium

inferredcites →https://doi.org/10.1371/journal.ppat.1003161openalex-snapshot

24 Hours in the Life of HIV-1 in a T Cell Line

inferredcites →https://doi.org/10.7326/0003-4819-148-10-200805200-00005openalex-snapshot

Incidence of Types of Cancer among HIV-Infected Persons Compared with the General Population in the United States, 1992–2003

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1093/molbev/msac163openalex-snapshot

A Phylogeny-aware GWAS Framework to Correct for Heritable Pathogen Effects on Infectious Disease Traits

inferred← citeshttps://doi.org/10.1097/qad.0000000000003996openalex-snapshot

Characterization of the genomic landscape of HIV-associated lymphoma reveals heterogeneity across histological subtypes

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