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Sequencing Angiosperm Plastid Genomes Made Easy: A Complete Set of Universal Primers and a Case Study on the Phylogeny of Saxifragales

https://doi.org/10.1093/gbe/evt063
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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PAUP * [Phylogenetic Analysis Using Parsimony (and Other Methods)]
inferredcites →https://doi.org/10.1007/s00239-008-9086-4openalex-snapshot
Extensive Rearrangements in the Chloroplast Genome of Trachelium caeruleum Are Associated with Repeats and tRNA Genes
inferredcites →https://doi.org/10.1007/s00239-008-9091-7openalex-snapshot
Complete Sequence of the Duckweed (Lemna minor) Chloroplast Genome: Structural Organization and Phylogenetic Relationships to Other Angiosperms
inferredcites →https://doi.org/10.1007/s00239-009-9275-9openalex-snapshot
The Complete Chloroplast Genome of Coix lacryma-jobi and a Comparative Molecular Evolutionary Analysis of Plastomes in Cereals
inferredcites →https://doi.org/10.1007/s00606-003-0056-4openalex-snapshot
The chloroplast genome of the ?basal? angiosperm Calycanthus fertilis ? structural and phylogenetic analyses
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The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
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Evolution of reduced and compact chloroplast genomes (cpDNAs) in gnetophytes: Selection toward a lower-cost strategy
inferredcites →https://doi.org/10.1016/s0076-6879(05)95020-9openalex-snapshot
Methods for Obtaining and Analyzing Whole Chloroplast Genome Sequences
inferredcites →https://doi.org/10.1038/46450openalex-snapshot
Ancestral primate viewed
inferredcites →https://doi.org/10.1046/j.1471-8278.2001.00107.xopenalex-snapshot
Genome walking with consensus primers: application to the large single copy region of chloroplast DNA
inferredcites →https://doi.org/10.1073/pnas.0907801107openalex-snapshot
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots
inferredcites →https://doi.org/10.1080/10635150500221028openalex-snapshot
How Much Data are Needed to Resolve a Difficult Phylogeny? Case Study in Lamiales
inferredcites →https://doi.org/10.1080/10635150801888871openalex-snapshot
Resolving an Ancient, Rapid Radiation in Saxifragales
inferredcites →https://doi.org/10.1086/658923openalex-snapshot
Phylogenetic Analysis of the Plastid Inverted Repeat for 244 Species: Insights into Deeper-Level Angiosperm Relationships from a Long, Slowly Evolving Sequence Region
inferredcites →https://doi.org/10.1093/bioinformatics/14.9.817openalex-snapshot
MODELTEST: testing the model of DNA substitution.
inferredcites →https://doi.org/10.1093/bioinformatics/bth352openalex-snapshot
Automatic annotation of organellar genomes with DOGMA
inferredcites →https://doi.org/10.1093/bioinformatics/btl446openalex-snapshot
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
inferredcites →https://doi.org/10.1093/bioinformatics/btm404openalex-snapshot
Clustal W and Clustal X version 2.0
inferredcites →https://doi.org/10.1093/bioinformatics/btp187openalex-snapshot
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
inferredcites →https://doi.org/10.1093/dnares/dsr002openalex-snapshot
The Complete Chloroplast Genome of 17 Individuals of Pest Species Jacobaea vulgaris: SNPs, Microsatellites and Barcoding Markers for Population and Phylogenetic Studies
inferredcites →https://doi.org/10.1093/gbe/evq036openalex-snapshot
Comparative Chloroplast Genomics Reveals the Evolution of Pinaceae Genera and Subfamilies
inferredcites →https://doi.org/10.1093/gbe/evr026openalex-snapshot
Comparative Chloroplast Genomes of Pinaceae: Insights into the Mechanism of Diversified Genomic Organizations
inferredcites →https://doi.org/10.1093/gbe/evr095openalex-snapshot
Loss of Different Inverted Repeat Copies from the Chloroplast Genomes of Pinaceae and Cupressophytes and Influence of Heterotachy on the Evaluation of Gymnosperm Phylogeny
inferredcites →https://doi.org/10.1093/gbe/evs021openalex-snapshot
The Complete Chloroplast Genome of Ginkgo biloba Reveals the Mechanism of Inverted Repeat Contraction
inferredcites →https://doi.org/10.1093/gbe/evs110openalex-snapshot
Mutational Dynamics of Aroid Chloroplast Genomes
inferredcites →https://doi.org/10.1093/molbev/msg159openalex-snapshot
Analysis of the Amborella trichopoda Chloroplast Genome Sequence Suggests That Amborella Is Not a Basal Angiosperm
inferredcites →https://doi.org/10.1093/molbev/msh147openalex-snapshot
The Chloroplast Genome of Nymphaea alba: Whole-Genome Analyses and the Problem of Identifying the Most Basal Angiosperm
inferredcites →https://doi.org/10.1093/molbev/msi173openalex-snapshot
Analysis of Acorus calamus Chloroplast Genome and Its Phylogenetic Implications
inferredcites →https://doi.org/10.1093/molbev/msm059openalex-snapshot
Chloroplast Genome (cpDNA) of Cycas taitungensis and 56 cp Protein-Coding Genes of Gnetum parvifolium: Insights into cpDNA Evolution and Phylogeny of Extant Seed Plants
inferredcites →https://doi.org/10.1093/molbev/msq229openalex-snapshot
Extreme Reconfiguration of Plastid Genomes in the Angiosperm Family Geraniaceae: Rearrangements, Repeats, and Codon Usage
inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
inferredcites →https://doi.org/10.1093/treephys/tpp015openalex-snapshot
Complete nucleotide sequence of Dendrocalamus latiflorus and Bambusa oldhamii chloroplast genomes
inferredcites →https://doi.org/10.1101/gr.074492.107openalex-snapshot
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
inferredcites →https://doi.org/10.1111/j.1759-6831.2012.00224.xopenalex-snapshot
Nelumbonaceae: Systematic position and species diversification revealed by the complete chloroplast genome
inferredcites →https://doi.org/10.1139/g07-003openalex-snapshot
Sequencing cucumber (Cucumis sativus L.) chloroplast genomes identifies differences between chilling-tolerant and -susceptible cucumber lines
inferredcites →https://doi.org/10.1186/1471-2105-10-357openalex-snapshot
AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses
inferredcites →https://doi.org/10.1186/1471-2148-6-32openalex-snapshot
Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids
inferredcites →https://doi.org/10.1186/1471-2164-6-176openalex-snapshot
ASAP: Amplification, sequencing & annotation of plastomes
inferredcites →https://doi.org/10.1186/1471-2164-9-211openalex-snapshot
Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains
inferredcites →https://doi.org/10.1186/1471-2229-10-68openalex-snapshot
Complete chloroplast genome of Oncidium Gower Ramsey and evaluation of molecular markers for identification and breeding in Oncidiinae
inferredcites →https://doi.org/10.1186/1471-2229-6-17openalex-snapshot
Rapid and accurate pyrosequencing of angiosperm plastid genomes.
inferredcites →https://doi.org/10.1186/1471-2229-9-131openalex-snapshot
Comparative analysis of the complete sequence of the plastid genome of Parthenium argentatum and identification of DNA barcodes to differentiate Parthenium species and lines
inferredcites →https://doi.org/10.1186/1741-7007-7-84openalex-snapshot
Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
inferredcites →https://doi.org/10.1186/1746-4811-3-4openalex-snapshot
A database of PCR primers for the chloroplast genomes of higher plants
inferredcites →https://doi.org/10.1186/1746-4811-6-22openalex-snapshot
Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform
inferredcites →https://doi.org/10.1266/ggs.81.311openalex-snapshot
Complete Nucleotide Sequence of the Cotton (Gossypium barbadense L.) Chloroplast Genome with a Comparative Analysis of Sequences among 9 Dicot Plants
inferredcites →https://doi.org/10.1371/journal.pbio.1001127openalex-snapshot
How Many Species Are There on Earth and in the Ocean?
inferredcites →https://doi.org/10.1371/journal.pone.0019954openalex-snapshot
A Set of 100 Chloroplast DNA Primer Pairs to Study Population Genetics and Phylogeny in Monocotyledons
inferredcites →https://doi.org/10.1371/journal.pone.0035071openalex-snapshot
Highly Variable Chloroplast Markers for Evaluating Plant Phylogeny at Low Taxonomic Levels and for DNA Barcoding
inferredcites →https://doi.org/10.3724/sp.j.1259.2013.00072openalex-snapshot
A Modified CTAB Protocol for Plant DNA Extraction
inferredcites →https://doi.org/10.3732/ajb.1000128openalex-snapshot
Primer development for the plastid region ycf1 in Annonaceae and other magnoliids
inferredcites →https://doi.org/10.3732/ajb.1000404openalex-snapshot
Angiosperm phylogeny: 17 genes, 640 taxa
inferredcites →https://doi.org/10.3732/ajb.1100547openalex-snapshot
Polymorphic chloroplast microsatellite loci in Nelumbo (Nelumbonaceae)
inferredcites →https://doi.org/10.3732/ajb.1200128openalex-snapshot
Low‐copy nuclear primers and ycf1 primers in Cactaceae

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Rubisco catalytic properties of wild and domesticated relatives provide scope for improving wheat photosynthesis
inferred← citeshttps://doi.org/10.1098/rstb.2015.0338openalex-snapshot
Telling plant species apart with DNA: from barcodes to genomes
inferred← citeshttps://doi.org/10.1104/pp.16.00750openalex-snapshot
Surveying Rubisco diversity and temperature response to improve crop photosynthetic efficiency
inferred← citeshttps://doi.org/10.1111/1755-0998.12128openalex-snapshot
Identification of chloroplast genome loci suitable for high‐resolution phylogeographic studies of C olocasia esculenta ( L .) S chott ( A raceae) and closely related taxa
inferred← citeshttps://doi.org/10.1111/1755-0998.12251openalex-snapshot
Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs
inferred← citeshttps://doi.org/10.1111/1755-0998.12585openalex-snapshot
The (in)complete organelle genome: exploring the use and nonuse of available technologies for characterizing mitochondrial and plastid chromosomes
inferred← citeshttps://doi.org/10.1111/1755-0998.12626openalex-snapshot
Strategies for complete plastid genome sequencing
inferred← citeshttps://doi.org/10.1111/jse.12474openalex-snapshot
DNA barcoding evaluation of Vicia (Fabaceae): Comparative efficacy of six universal barcode loci on abundant species
inferred← citeshttps://doi.org/10.1111/jse.12542openalex-snapshot
Phylogenomic analyses of the Photinia complex support the recognition of a new genus Phippsiomeles and the resurrection of a redefined Stranvaesia in Maleae (Rosaceae)
inferred← citeshttps://doi.org/10.1111/jse.12556openalex-snapshot
Comparative phylogenetic analyses of Chinese Horsfieldia (Myristicaceae) using complete chloroplast genome sequences
inferred← citeshttps://doi.org/10.1111/jse.12688openalex-snapshot
Out of the Pan‐Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics
inferred← citeshttps://doi.org/10.1111/jse.12708openalex-snapshot
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants
inferred← citeshttps://doi.org/10.1111/jse.12802openalex-snapshot
Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae)
inferred← citeshttps://doi.org/10.1111/jse.70015openalex-snapshot
Plastome evolution in the Caesalpinia group (Caesalpinioideae, Fabaceae): Comparative genomics reveals genome dynamics, phylogenetic insights and adaptive evolution
inferred← citeshttps://doi.org/10.1111/njb.03412openalex-snapshot
Comparative genomics and phylogenetic perspectives of six fertile Lycoris species endemic to East Asia based on plastome characterization
inferred← citeshttps://doi.org/10.1111/tpj.13491openalex-snapshot
What can we do with 1000 plastid genomes?
inferred← citeshttps://doi.org/10.1139/gen-2019-0153openalex-snapshot
Chloroplast genomes of seven species of Coryloideae (Betulaceae): structures and comparative analysis
inferred← citeshttps://doi.org/10.1139/gen-2024-0020openalex-snapshot
Chloroplast genome of Ecbolium viride (Forssk.) Alston: plastome evolution and phylogenomics of Justiceae (Acanthaceae, Acanthoideae)
inferred← citeshttps://doi.org/10.1155/2018/6293847openalex-snapshot
Development of Chloroplast Genomic Resources in Chinese Yam (Dioscorea polystachya)
inferred← citeshttps://doi.org/10.1155/2018/7627191openalex-snapshot
Phylogeny of Maleae (Rosaceae) Based on Multiple Chloroplast Regions: Implications to Genera Circumscription
inferred← citeshttps://doi.org/10.1155/2019/5046958openalex-snapshot
Comparative Chloroplast Genomes ofSorghumSpecies: Sequence Divergence and Phylogenetic Relationships
inferred← citeshttps://doi.org/10.1155/2019/7265030openalex-snapshot
Genome Comparison Reveals Mutation Hotspots in the Chloroplast Genome and Phylogenetic Relationships of Ormosia Species
inferred← citeshttps://doi.org/10.1155/2020/9014873openalex-snapshot
Complete Chloroplast Genome Sequence of Chinese Lacquer Tree (Toxicodendron vernicifluum, Anacardiaceae) and Its Phylogenetic Significance
inferred← citeshttps://doi.org/10.1186/s12862-020-01661-0openalex-snapshot
Evolutionary directions of single nucleotide substitutions and structural mutations in the chloroplast genomes of the family Calycanthaceae
inferred← citeshttps://doi.org/10.1186/s12862-024-02318-yopenalex-snapshot
Comparative analysis of chloroplast genomes in ten holly (Ilex) species: insights into phylogenetics and genome evolution
inferred← citeshttps://doi.org/10.1186/s12863-014-0138-zopenalex-snapshot
A chloroplast genomic strategy for designing taxon specific DNA mini-barcodes: a case study on ginsengs
inferred← citeshttps://doi.org/10.1186/s12864-018-4633-xopenalex-snapshot
Chloroplast genome analyses and genomic resource development for epilithic sister genera Oresitrophe and Mukdenia (Saxifragaceae), using genome skimming data
inferred← citeshttps://doi.org/10.1186/s12864-020-07219-0openalex-snapshot
Characteristics of the completed chloroplast genome sequence of Xanthium spinosum: comparative analyses, identification of mutational hotspots and phylogenetic implications
inferred← citeshttps://doi.org/10.1186/s12864-021-07394-8openalex-snapshot
Chloroplast genome variation and phylogenetic relationships of Atractylodes species
inferred← citeshttps://doi.org/10.1186/s12864-022-08319-9openalex-snapshot
Structural characterization of Platanthera ussuriensis chloroplast genome and comparative analyses with other species of Orchidaceae
inferred← citeshttps://doi.org/10.1186/s12864-024-10455-3openalex-snapshot
Comparative and phylogenetic analysis of the complete chloroplast genomes of 10 Artemisia selengensis resources based on high-throughput sequencing
inferred← citeshttps://doi.org/10.1186/s12864-025-11629-3openalex-snapshot
Comparative and evolutionary analysis of chloroplast genomes from five rare Styrax species
inferred← citeshttps://doi.org/10.1186/s12864-025-12118-3openalex-snapshot
Cytotype classification and genetic diversity of Platostoma palustre revealed by rDNA localization and chloroplast genome
inferred← citeshttps://doi.org/10.1186/s12870-014-0289-0openalex-snapshot
A precise chloroplast genome of Nelumbo nucifera (Nelumbonaceae) evaluated with Sanger, Illumina MiSeq, and PacBio RS II sequencing platforms: insight into the plastid evolution of basal eudicots
inferred← citeshttps://doi.org/10.1186/s12870-018-1421-3openalex-snapshot
Interspecific chloroplast genome sequence diversity and genomic resources in Diospyros
inferred← citeshttps://doi.org/10.1186/s12870-020-02801-wopenalex-snapshot
Phylogenomic and evolutionary dynamics of inverted repeats across Angelica plastomes
inferred← citeshttps://doi.org/10.1186/s12870-022-03736-0openalex-snapshot
Plastome structure of 8 Calanthe s.l. species (Orchidaceae): comparative genomics, phylogenetic analysis
inferred← citeshttps://doi.org/10.1186/s12870-024-04917-9openalex-snapshot
Plastid phylogenomics and fossil evidence provide new insights into the evolutionary complexity of the ‘woody clade’ in Saxifragales
inferred← citeshttps://doi.org/10.1186/s12870-024-04989-7openalex-snapshot
Comparative chloroplast genomes of Dactylicapnos species: insights into phylogenetic relationships
inferred← citeshttps://doi.org/10.1186/s12870-024-04995-9openalex-snapshot
Twelve newly assembled jasmine chloroplast genomes: unveiling genomic diversity, phylogenetic relationships and evolutionary patterns among Oleaceae and Jasminum species
inferred← citeshttps://doi.org/10.1186/s12870-025-06380-6openalex-snapshot
Comparative chloroplast genomes of Incarvillea species (Bignoniaceae) unveiled genomic diversity and shed light on phylogenetic relationships
inferred← citeshttps://doi.org/10.1186/s12870-025-06731-3openalex-snapshot
De-novo assembly and comparative analysis of the complete mitogenome of traditional Chinese medicine Strobilanthes sarcorrhiza
inferred← citeshttps://doi.org/10.1186/s12870-025-07067-8openalex-snapshot
Species concept of golden flower camellias in China
inferred← citeshttps://doi.org/10.1186/s12870-026-08150-4openalex-snapshot
Chloroplast genome sequencing in winged bean (Psophocarpus tetragonolobus L.) and comparative analysis with other legumes
inferred← citeshttps://doi.org/10.1186/s13007-020-00662-wopenalex-snapshot
Methods of analysis of chloroplast genomes of C3, Kranz type C4 and Single Cell C4 photosynthetic members of Chenopodiaceae
inferred← citeshttps://doi.org/10.1186/s13020-020-0298-xopenalex-snapshot
The chloroplasts genomic analyses of Rosa laevigata, R. rugosa and R. canina
inferred← citeshttps://doi.org/10.1186/s13059-016-1004-2openalex-snapshot
Chloroplast genomes: diversity, evolution, and applications in genetic engineering
inferred← citeshttps://doi.org/10.1186/s40659-020-00289-0openalex-snapshot
Development of nuclear SSR and chloroplast genome markers in diverse Liriodendron chinense germplasm based on low-coverage whole genome sequencing
inferred← citeshttps://doi.org/10.12688/f1000research.178398.2openalex-snapshot
Complete chloroplast genomes of endemic Astragalus and Oxytropis species from Uzbekistan
inferred← citeshttps://doi.org/10.12688/f1000research.178398.3openalex-snapshot
Complete chloroplast genomes of endemic Astragalus and Oxytropis species from Uzbekistan
inferred← citeshttps://doi.org/10.12688/f1000research.178398.4openalex-snapshot
Complete chloroplast genomes of endemic Astragalus and Oxytropis species from Uzbekistan
inferred← citeshttps://doi.org/10.12688/f1000research.189961.1openalex-snapshot
Complete chloroplast genome of the endemic Acanthophyllum aculeatum Schischk. from Uzbekistan: comparative and phylogenetic analyses
inferred← citeshttps://doi.org/10.1371/journal.pone.0077965openalex-snapshot
Complete Chloroplast Genome of Sedum sarmentosum and Chloroplast Genome Evolution in Saxifragales
inferred← citeshttps://doi.org/10.1371/journal.pone.0099016openalex-snapshot
Comparative Chloroplast Genomes of Photosynthetic Orchids: Insights into Evolution of the Orchidaceae and Development of Molecular Markers for Phylogenetic Applications
inferred← citeshttps://doi.org/10.1371/journal.pone.0143792openalex-snapshot
The Complete Chloroplast Genome of Guadua angustifolia and Comparative Analyses of Neotropical-Paleotropical Bamboos
inferred← citeshttps://doi.org/10.1371/journal.pone.0205407openalex-snapshot
Haplotyping of Cornus florida and C. kousa chloroplasts: Insights into species-level differences and patterns of plastic DNA variation in cultivars
inferred← citeshttps://doi.org/10.1371/journal.pone.0216645openalex-snapshot
Complete chloroplast genome of Camellia japonica genome structures, comparative and phylogenetic analysis
inferred← citeshttps://doi.org/10.1371/journal.pone.0226865openalex-snapshot
Complete chloroplast genomes of two Siraitia Merrill species: Comparative analysis, positive selection and novel molecular marker development
inferred← citeshttps://doi.org/10.1371/journal.pone.0272990openalex-snapshot
The chloroplasts genomic analyses of four specific Caragana species
inferred← citeshttps://doi.org/10.18174/390196openalex-snapshot
Utilization of complete chloroplast genomes for phylogenetic studies
inferred← citeshttps://doi.org/10.18699/vj18.390openalex-snapshot
Comparative analysis of the complete plastomes of garlic Allium sativum and bulb onion Allium cepa
inferred← citeshttps://doi.org/10.18805/lr-596openalex-snapshot
Phylogenetic Relationships in Vicia Subgenus Vicilla (Fabaceae) Based on Combined Evidence from DNA Sequences
inferred← citeshttps://doi.org/10.21203/rs.3.rs-154608/v1openalex-snapshot
Chloroplast phylogenomics and the dynamic evolution of Santalum (Santalaceae)
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1714774/v1openalex-snapshot
Complete chloroplast genome sequences of Gynostemma guangxiense: genome structure, codon usage bias and phylogenetic relationships in Gynostemma (Cucurbitaceae)
inferred← citeshttps://doi.org/10.21203/rs.3.rs-2265745/v1openalex-snapshot
Development of Specific-Barcode Based on Chloroplast Genome and Its Application in Metabarcoding Molecular Identification of Chinese Patent Medicines Berberidis Radix
inferred← citeshttps://doi.org/10.21203/rs.3.rs-2658682/v1openalex-snapshot
Comparative and phylogenetic analysis of the complete chloroplast genomes of 10 Artemisia selengensis resources based on high- throughput sequencing
inferred← citeshttps://doi.org/10.21203/rs.3.rs-916085/v1openalex-snapshot
A Comparative Study of the Chloroplast Genomes of Five Lepidium Medicinal Plants
inferred← citeshttps://doi.org/10.2298/botserb2302279xopenalex-snapshot
The complete chloroplast genome sequence of Rhododendron fortunei: Structural comparative and phylogenetic analysis in the ericaceae family
inferred← citeshttps://doi.org/10.31055/1851.2372.v55.n3.28030openalex-snapshot
Análisis taxonómico molecular de individuos del genero Lathyrus hallados en el extremo norte de Chile, mediante DNA barcoding
inferred← citeshttps://doi.org/10.31083/j.fbl2704124openalex-snapshot
Structural Characterization and Comparative Analyses of the Chloroplast Genome of Eastern Asian Species Cardamine occulta (Asian C. flexuosa With.) and Other Cardamine Species
inferred← citeshttps://doi.org/10.3109/19401736.2015.1115489openalex-snapshot
The complete chloroplast genome of traditional Chinese medical plants Paris polyphylla var. yunnanensis
inferred← citeshttps://doi.org/10.3389/fgene.2020.00227openalex-snapshot
Complete Chloroplast Genome Sequence of Hibiscus cannabinus and Comparative Analysis of the Malvaceae Family
inferred← citeshttps://doi.org/10.3389/fgene.2021.687844openalex-snapshot
Comparative Analysis of the Chloroplast Genome for Four Pennisetum Species: Molecular Structure and Phylogenetic Relationships
inferred← citeshttps://doi.org/10.3389/fgene.2022.764534openalex-snapshot
A Comparative Analysis of the Chloroplast Genomes of Four Polygonum Medicinal Plants
inferred← citeshttps://doi.org/10.3389/fgene.2022.845619openalex-snapshot
Comparative Analysis of Chloroplast Genome Structure and Phylogenetic Relationships Among Six Taxa Within the Genus Catalpa (Bignoniaceae)
inferred← citeshttps://doi.org/10.3389/fgene.2022.895146openalex-snapshot
Comparative chloroplast genome analyses of 23 species in Swertia L. (Gentianaceae) with implications for its phylogeny
inferred← citeshttps://doi.org/10.3389/fphar.2020.585687openalex-snapshot
Development of a Specific Mini-Barcode From Plastome and its Application for Qualitative and Quantitative Identification of Processed Herbal Products Using DNA Metabarcoding Technique: A Case Study on Senna
inferred← citeshttps://doi.org/10.3389/fpls.2015.00042openalex-snapshot
Chloroplast genome of Aconitum barbatum var. puberulum (Ranunculaceae) derived from CCS reads using the PacBio RS platform
inferred← citeshttps://doi.org/10.3389/fpls.2015.00662openalex-snapshot
Comparative analysis of complete chloroplast genome sequences of two tropical trees Machilus yunnanensis and Machilus balansae in the family Lauraceae
inferred← citeshttps://doi.org/10.3389/fpls.2017.00015openalex-snapshot
Comparative Analysis of Six Lagerstroemia Complete Chloroplast Genomes
inferred← citeshttps://doi.org/10.3389/fpls.2017.00968openalex-snapshot
The Complete Chloroplast Genome of Chinese Bayberry (Morella rubra, Myricaceae): Implications for Understanding the Evolution of Fagales
inferred← citeshttps://doi.org/10.3389/fpls.2017.01148openalex-snapshot
Phylogenetic Resolution in Juglans Based on Complete Chloroplast Genomes and Nuclear DNA Sequences
inferred← citeshttps://doi.org/10.3389/fpls.2017.01271openalex-snapshot
De Novo Assembly of Complete Chloroplast Genomes from Non-model Species Based on a K-mer Frequency-Based Selection of Chloroplast Reads from Total DNA Sequences
inferred← citeshttps://doi.org/10.3389/fpls.2017.01854openalex-snapshot
Development of Chloroplast Genomic Resources for Oryza Species Discrimination
inferred← citeshttps://doi.org/10.3389/fpls.2018.00246openalex-snapshot
Development and Application of Genomic Resources in an Endangered Palaeoendemic Tree, Parrotia subaequalis (Hamamelidaceae) From Eastern China
inferred← citeshttps://doi.org/10.3389/fpls.2018.00965openalex-snapshot
The Complete Chloroplast Genomes of Six Ipomoea Species and Indel Marker Development for the Discrimination of Authentic Pharbitidis Semen (Seeds of I. nil or I. purpurea)
inferred← citeshttps://doi.org/10.3389/fpls.2019.00528openalex-snapshot
Does the Enigmatic Wightia Belong to Paulowniaceae (Lamiales)?
inferred← citeshttps://doi.org/10.3389/fpls.2021.774482openalex-snapshot
Chloroplast Genome Evolution in Four Montane Zingiberaceae Taxa in China
inferred← citeshttps://doi.org/10.3389/fpls.2022.1049209openalex-snapshot
Comparative and phylogenetic analysis of complete chloroplast genomes from five Artemisia species
inferred← citeshttps://doi.org/10.3389/fpls.2022.1065218openalex-snapshot
The population genomic analyses of chloroplast genomes shed new insights on the complicated ploidy and evolutionary history in Fragaria
inferred← citeshttps://doi.org/10.3389/fpls.2022.1095781openalex-snapshot
The chloroplast genome of black pepper (Piper nigrum L.) and its comparative analysis with related Piper species
inferred← citeshttps://doi.org/10.3389/fpls.2022.841767openalex-snapshot
Haplotype Analysis of Chloroplast Genomes for Jujube Breeding
inferred← citeshttps://doi.org/10.3389/fpls.2022.903306openalex-snapshot
Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review
inferred← citeshttps://doi.org/10.3389/fpls.2022.920826openalex-snapshot
Phylogenomics and Genetic Diversity of Arnebiae Radix and Its Allies (Arnebia, Boraginaceae) in China
inferred← citeshttps://doi.org/10.3389/fpls.2022.965335openalex-snapshot
Comparative chloroplast genome analysis of Ficus (Moraceae): Insight into adaptive evolution and mutational hotspot regions
inferred← citeshttps://doi.org/10.3389/fpls.2023.1163065openalex-snapshot
Phylogeny of Leontopodium (Asteraceae) in China—with a reference to plastid genome and nuclear ribosomal DNA
inferred← citeshttps://doi.org/10.3389/fpls.2024.1336229openalex-snapshot
Phylogeny, biogeography, and character evolution of Anaphalis (Gnaphalieae, Asteraceae)
inferred← citeshttps://doi.org/10.3389/fpls.2024.1356912openalex-snapshot
The first complete chloroplast genome of Thalictrum fargesii: insights into phylogeny and species identification
inferred← citeshttps://doi.org/10.3390/agronomy12122972openalex-snapshot
Complete Chloroplast Genome Sequence of a New Variety of Brasenia schreberi: Genome Characteristics, Comparative Analysis, and Phylogenetic Relationships
inferred← citeshttps://doi.org/10.3390/cimb47010064openalex-snapshot
The First Complete Chloroplast Genome Sequence of Secale strictum subsp. africanum Stapf (Poaceae), the Putative Ancestor of the Genus Secale
inferred← citeshttps://doi.org/10.3390/cimb47040222openalex-snapshot
Complete Chloroplast Genome Sequences of Three Canna Species: Genome Characterization, Comparative Analyses, and Phylogenetic Relationships Within Zingiberales
inferred← citeshttps://doi.org/10.3390/f12070861openalex-snapshot
Comparative Analysis of the Complete Chloroplast Genomes of Four Chestnut Species (Castanea)
inferred← citeshttps://doi.org/10.3390/f12101303openalex-snapshot
Comparative and Phylogenetic Analysis of the Complete Chloroplast Genome of Santalum (Santalaceae)
inferred← citeshttps://doi.org/10.3390/f14040818openalex-snapshot
Comparative Chloroplast Genome Analysis of Chinese Lacquer Tree (Toxicodendron vernicifluum, Anacardiaceae): East-West Divergence within Its Range in China
inferred← citeshttps://doi.org/10.3390/genes13111936openalex-snapshot
Variation among the Complete Chloroplast Genomes of the Sumac Species Rhus chinensis: Reannotation and Comparative Analysis
inferred← citeshttps://doi.org/10.3390/genes15070940openalex-snapshot
Intraspecific Differentiation of Styrax japonicus (Styracaceae) as Revealed by Comparative Chloroplast and Evolutionary Analyses
inferred← citeshttps://doi.org/10.3390/genes16091017openalex-snapshot
Chloroplast Genome Evolution and Codon Usage In the Medicinal Plant Pothos chinensis (Araceae)
inferred← citeshttps://doi.org/10.3390/genes8090212openalex-snapshot
Chloroplast Genome Sequence of Clusterbean (Cyamopsis tetragonoloba L.): Genome Structure and Comparative Analysis
inferred← citeshttps://doi.org/10.3390/genes8090227openalex-snapshot
The Chloroplast Genome Sequence of Scutellaria baicalensis Provides Insight into Intraspecific and Interspecific Chloroplast Genome Diversity in Scutellaria
inferred← citeshttps://doi.org/10.3390/genes9100503openalex-snapshot
The Complete Plastome Sequences of Eleven Capsicum Genotypes: Insights into DNA Variation and Molecular Evolution
inferred← citeshttps://doi.org/10.3390/horticulturae10020121openalex-snapshot
Developing EST-SSR Markers for Identifying and Evaluating Asparagus Germplasm Resources Based on Transcriptome Sequences
inferred← citeshttps://doi.org/10.3390/horticulturae10030260openalex-snapshot
Chloroplast Genome-Wide Analysis Reveals New Single-Nucleotide Polymorphism Resources for the ARMS-qPCR Identification of Dendrobium brymerianum
inferred← citeshttps://doi.org/10.3390/horticulturae10121375openalex-snapshot
Characterization of the Complete Chloroplast Genomes and Phylogenetic Analysis of Sapotaceae
inferred← citeshttps://doi.org/10.3390/horticulturae11050559openalex-snapshot
De Novo Assembly and Comparative Analysis of the Mitochondrial Genomes for Six Rubus Species
inferred← citeshttps://doi.org/10.3390/ijms18091839openalex-snapshot
Molecular Structure and Phylogenetic Analyses of Complete Chloroplast Genomes of Two Aristolochia Medicinal Species
inferred← citeshttps://doi.org/10.3390/ijms20112726openalex-snapshot
Cuscuta Species Identification Based on the Morphology of Reproductive Organs and Complete Chloroplast Genome Sequences
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