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An expanded mammal mitogenome dataset from Southeast Asia

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-1-4939-2990-0_13openalex-snapshot
Analysis of Whole Mitogenomes from Ancient Samples
inferredcites →https://doi.org/10.1016/j.cub.2012.02.058openalex-snapshot
Screening mammal biodiversity using DNA from leeches
inferredcites →https://doi.org/10.1016/j.tree.2014.04.003openalex-snapshot
Environmental DNA for wildlife biology and biodiversity monitoring
inferredcites →https://doi.org/10.1038/nprot.2014.063openalex-snapshot
Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX
inferredcites →https://doi.org/10.1093/bib/bbs012openalex-snapshot
Using Tablet for visual exploration of second-generation sequencing data
inferredcites →https://doi.org/10.1093/bioinformatics/bth352openalex-snapshot
Automatic annotation of organellar genomes with DOGMA
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/bioinformatics/btu077openalex-snapshot
SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads
inferredcites →https://doi.org/10.1093/gigascience/gix053openalex-snapshot
An expanded mammal mitogenome dataset from Southeast Asia
inferredcites →https://doi.org/10.1093/molbev/msp259openalex-snapshot
SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/nar/25.5.955openalex-snapshot
tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence
inferredcites →https://doi.org/10.1093/nar/gkt371openalex-snapshot
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach
inferredcites →https://doi.org/10.1098/rsos.160350openalex-snapshot
Two species of Southeast Asian cats in the genus Catopuma with diverging histories: an island endemic forest specialist and a widespread habitat generalist
inferredcites →https://doi.org/10.1101/gr.107524.110openalex-snapshot
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
inferredcites →https://doi.org/10.1139/gen-2015-0193openalex-snapshot
Field calibration of blowfly-derived DNA against traditional methods for assessing mammal diversity in tropical forests
inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot
BLAST+: architecture and applications
inferredcites →https://doi.org/10.1186/1471-2148-11-77openalex-snapshot
Nuclear versus mitochondrial DNA: evidence for hybridization in colobine monkeys
inferredcites →https://doi.org/10.1186/1756-0500-5-337openalex-snapshot
AdapterRemoval: easy cleaning of next-generation sequencing reads
inferredcites →https://doi.org/10.1186/s12862-014-0176-1openalex-snapshot
Mitogenomics of the Old World monkey tribe Papionini
inferredcites →https://doi.org/10.1186/s12864-015-1437-0openalex-snapshot
Mitogenomic phylogeny of the common long-tailed macaque (Macaca fascicularis fascicularis)
inferredcites →https://doi.org/10.1186/s12983-015-0115-zopenalex-snapshot
iDNA from terrestrial haematophagous leeches as a wildlife surveying and monitoring tool – prospects, pitfalls and avenues to be developed
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s13127-024-00650-1zenodo-depositor-declared
Molecular evolution of the mitochondrial genome underlies semi-aquatic adaptation in lutrinae
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlae152zenodo-depositor-declared
Morphological and molecular systematics of the extant Colobinae Blyth, 1863 (Primates: Cercopithecidae)
inferred← citeshttps://doi.org/10.2139/ssrn.4019720openalex-extracted
Phylogenomics of the World's Otters: Evolutionary Insights from Whole-Genome Sequences
inferred← citeshttps://doi.org/10.1002/ece3.8168openalex-snapshot
Genetic structure and ecological niche segregation of Indian gray mongoose (Urva edwardsii) in Iran
inferred← citeshttps://doi.org/10.1002/ece3.9585openalex-snapshot
Identification of three Asian otter species (Aonyx cinereus, Lutra sumatrana, and Lutrogale perspicillata) using a novel noninvasive PCR‐RFLP analysis
inferred← citeshttps://doi.org/10.1002/ece3.9601openalex-snapshot
Taxonomic status of otter species in Nakai‐Nam Theun National Park, Lao PDR, based on DNA evidence
inferred← citeshttps://doi.org/10.1002/edn3.138openalex-snapshot
Mitochondrial genomes of Danish vertebrate species generated for the national DNA reference database, DNAmark
inferred← citeshttps://doi.org/10.1002/edn3.46openalex-snapshot
Fly‐derived DNA and camera traps are complementary tools for assessing mammalian biodiversity
inferred← citeshttps://doi.org/10.1007/s12686-025-01383-9openalex-snapshot
Historical genomic variation of Eurasian otters (Lutra lutra) in Britain, from hunting trophies
inferred← citeshttps://doi.org/10.1007/s42991-024-00458-8openalex-snapshot
Utilizing COI gene for the identification of Indian Rhesus macaque (Macaca mulatta) and determining their genetic relationship with other macaque species
inferred← citeshttps://doi.org/10.1016/j.angen.2022.200144openalex-snapshot
Characterization of the complete mitochondrial genome of the Indian crested porcupine (Hystrix indica)
inferred← citeshttps://doi.org/10.1016/j.cub.2022.06.036openalex-snapshot
Phylogenomics of the world’s otters
inferred← citeshttps://doi.org/10.1016/j.dib.2020.105721openalex-snapshot
The first complete mitochondrial genome data of Hippocampus kuda originating from Malaysia
inferred← citeshttps://doi.org/10.1016/j.gene.2023.147303openalex-snapshot
The complete mitochondrial genome and phylogenetic characterization of two putative subspecies of golden jackal (Canis aureus cruesemanni and Canis aureus moreotica)
inferred← citeshttps://doi.org/10.1016/j.jhevol.2020.102852openalex-snapshot
Mitogenomics of macaques (Macaca) across Wallace's Line in the context of modern human dispersals
inferred← citeshttps://doi.org/10.1017/s0030605321000107openalex-snapshot
Genetic and viability assessment of a reintroduced Eurasian otterLutra lutrapopulation on the River Ticino, Italy
inferred← citeshttps://doi.org/10.1038/s41467-022-28778-8openalex-snapshot
Measuring protected-area effectiveness using vertebrate distributions from leech iDNA
inferred← citeshttps://doi.org/10.1080/19768354.2023.2283763openalex-snapshot
Mitochondrial genome-based synthesis and timeline of Eurasian otter ( Lutra lutra ) phylogeography
inferred← citeshttps://doi.org/10.1080/23802359.2018.1443853openalex-snapshot
The complete mitochondrial genome of Asian palm civet ( Paradoxurus hermaphroditus ) with phylogenetic consideration
inferred← citeshttps://doi.org/10.1080/23802359.2020.1797583openalex-snapshot
Molecular identification and phylogenetic analysis of a Callosciurus notatus complete mitogenome from Peninsular Malaysia
inferred← citeshttps://doi.org/10.1080/23802359.2020.1812449openalex-snapshot
The first complete mitochondrial genome data of Geoffroy's rousette, Rousettus amplexicaudatus originating from Malaysia
inferred← citeshttps://doi.org/10.1080/23802359.2021.1872433openalex-snapshot
Characterization of the mitogenomes of long-tailed giant rat,Leopoldamys sabanusand a comparative analysis with otherLeopoldamysspecies
inferred← citeshttps://doi.org/10.1080/23802359.2022.2141080openalex-snapshot
First complete mitochondrial genome of the Saharan striped polecat (Ictonyx libycus)
inferred← citeshttps://doi.org/10.1080/23802359.2024.2333567openalex-snapshot
The complete mitochondrial genome of Meller’s mongoose ( Rhynchogale melleri )
inferred← citeshttps://doi.org/10.1080/23802359.2025.2572391openalex-snapshot
The complete mitochondrial genome of the silver-backed chevrotain ( Tragulus versicolor ) from Vietnam and its phylogenetic position within Tragulidae
inferred← citeshttps://doi.org/10.1093/conphys/coaa009openalex-snapshot
Hair cortisol analyses in different mammal species: choosing the wrong assay may lead to erroneous results
inferred← citeshttps://doi.org/10.1093/gigascience/giz029openalex-snapshot
An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies
inferred← citeshttps://doi.org/10.1093/molbev/msad207openalex-snapshot
Genomics Reveals Complex Population History and Unexpected Diversity of Eurasian Otters (Lutra lutra) in Britain Relative to Genetic Methods
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlaa004openalex-snapshot
Recent mitochondrial lineage extinction in the critically endangered Javan rhinoceros
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlaa040openalex-snapshot
Molecular phylogeny and morphological diversity of theNiviventer fulvescensspecies complex with emphasis on species from China
inferred← citeshttps://doi.org/10.1101/2020.02.10.941336openalex-snapshot
Measuring protected-area outcomes with leech iDNA: large-scale quantification of vertebrate biodiversity in Ailaoshan nature reserve
inferred← citeshttps://doi.org/10.1109/icoco56118.2022.10031981openalex-snapshot
MyDNAmark.org: A Comprehensive Genomic Visualisation Database for Malaysian Species
inferred← citeshttps://doi.org/10.1111/1755-0998.13101openalex-snapshot
Metabarcoding of eukaryotic parasite communities describes diverse parasite assemblages spanning the primate phylogeny
inferred← citeshttps://doi.org/10.1111/csp2.70010openalex-snapshot
Molecular tracing of the geographical origin of captive Asian small‐clawed otters in Japan
inferred← citeshttps://doi.org/10.1111/jzs.12440openalex-snapshot
Mitogenomics of Didelphis (Mammalia; Didelphimorphia; Didelphidae) and insights into character evolution in the genus
inferred← citeshttps://doi.org/10.1515/mammalia-2024-0004openalex-snapshot
Molecular analysis reveals the evolutionary distinctiveness of the Silver-backed Chevrotain within the genus Tragulus
inferred← citeshttps://doi.org/10.1515/mammalia-2026-0047openalex-snapshot
Mitochondrial phylogeography of the Saharan striped polecat ( Poecilictis libyca ) and zorilla ( Ictonyx striatus )
inferred← citeshttps://doi.org/10.17576/jsm-2023-5203-05openalex-snapshot
Molecular Phylogeny of Long-Tailed Giant Rats (Muridae: Genus Leopoldamys) Based on Mitochondrial Cytochrome B Sequences
inferred← citeshttps://doi.org/10.23818/limn.39.06openalex-snapshot
Towards an Iberian DNA barcode reference library of freshwater macroinvertebrates and fishes
inferred← citeshttps://doi.org/10.3233/faia190092openalex-snapshot
Conceptual Design for Crowdsourcing Biodiversity Tagging Application
inferred← citeshttps://doi.org/10.3390/ani13203165openalex-snapshot
Analysis of the Complete Mitochondrial Genome of Pteronura brasiliensis and Lontra canadensis
inferred← citeshttps://doi.org/10.3390/ani15121678openalex-snapshot
The First Report of Rhino DNA in Thailand: A Possible Extinct Indian Javan Subspecies, Rhinoceros sondaicus inermis
inferred← citeshttps://doi.org/10.59350/9m982-bzw90openalex-snapshot
Bringing Wildlife Forensics into the Omics Era. Q&A with Alfred Arulandhu and Martijn Staats
inferred← citeshttps://doi.org/10.59350/rwjq0-cp449openalex-snapshot
Bringing Wildlife Forensics into the Omics Era. Q&A with Alfred Arulandhu and Martijn Staats
inferred← citeshttps://doi.org/10.7717/peerj.8033openalex-snapshot
Characteristics of the complete mitochondrial genome of the monotypic genus Arctictis (Family: Viverridae) and its phylogenetic implications
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