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The Evolution of Genome Structure by Natural and Sexual Selection

https://doi.org/10.1093/jhered/esw041
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Animal cytology and evolution
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Matrix inversions for chromosomal inversions: A method to construct summary statistics in complex coalescent models
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Sex differences in fitness and selection for centric fusions between sex-chromosomes and autosomes
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Inversion polymorphisms and nucleotide variability in Drosophila
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Lateral gene transfer and the nature of bacterial innovation
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A sequential coalescent algorithm for chromosomal inversions
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Turnover of sex chromosomes induced by sexual conflict
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A role for a neo-sex chromosome in stickleback speciation
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The genetic sex-determination system predicts adult sex ratios in tetrapods
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Y-chromosome evolution: emerging insights into processes of Y-chromosome degeneration
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Tree of Sex: A database of sexual systems
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Steps in the evolution of heteromorphic sex chromosomes
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The incomplete natural history of mitochondria
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Semipermeable species boundaries between Anopheles gambiae and Anopheles arabiensis : Evidence from multilocus DNA sequence variation
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Chromosomal inversions and the reproductive isolation of species
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Colonization of America by Drosophila subobscura : Experiment in natural populations that supports the adaptive role of chromosomal-inversion polymorphism
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The Evolution of Sex Determination
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Female Meiosis Drives Karyotypic Evolution in Mammals
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Chromosomal Inversions, Natural Selection and Adaptation in the Malaria Vector Anopheles funestus
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On the evolution of sex determination
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Coalescent patterns for chromosomal inversions in divergent populations
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LOCAL ADAPTATION AND THE EVOLUTION OF CHROMOSOME FUSIONS
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ACCUMULATING POSTZYGOTIC ISOLATION GENES IN PARAPATRY: A NEW TWIST ON CHROMOSOMAL SPECIATION
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Along the speciation continuum in sticklebacks
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SELECTION IN HETEROGENEOUS ENVIRONMENTS MAINTAINS THE GENE ARRANGEMENT POLYMORPHISM OF DROSOPHILA PSEUDOOBSCURA
inferredcites →https://doi.org/10.1111/j.1558-5646.2009.00871.xopenalex-snapshot
MULTIPLE INTERACTING LOCI CONTROL SEX DETERMINATION IN LAKE MALAWI CICHLID FISH
inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01681.xopenalex-snapshot
THE CONTRIBUTION OF FEMALE MEIOTIC DRIVE TO THE EVOLUTION OF NEO‐SEX CHROMOSOMES
inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01836.xopenalex-snapshot
REPRODUCTIVE ISOLATION AND LOCAL ADAPTATION QUANTIFIED FOR A CHROMOSOME INVERSION IN A MALARIA MOSQUITO
inferredcites →https://doi.org/10.1111/jeb.12415openalex-snapshot
Adult sex ratio variation: implications for breeding system evolution
inferredcites →https://doi.org/10.1111/mec.13074openalex-snapshot
Chromosome inversions, adaptive cassettes and the evolution of species' ranges
inferredcites →https://doi.org/10.1126/science.1174705openalex-snapshot
Sexual Conflict Resolved by Invasion of a Novel Sex Determiner in Lake Malawi Cichlid Fishes
inferredcites →https://doi.org/10.1126/science.1246338openalex-snapshot
Complex evolutionary trajectories of sex chromosomes across bird taxa
inferredcites →https://doi.org/10.1126/science.1258524openalex-snapshot
Extensive introgression in a malaria vector species complex revealed by phylogenomics
inferredcites →https://doi.org/10.1126/science.231.4743.1278openalex-snapshot
Myrmecia pilosula , an Ant with Only One Pair of Chromosomes
inferredcites →https://doi.org/10.1126/science.287.5451.308openalex-snapshot
Rapid Evolution of a Geographic Cline in Size in an Introduced Fly
inferredcites →https://doi.org/10.1128/mmbr.00035-13openalex-snapshot
Bacterial Genome Instability
inferredcites →https://doi.org/10.1146/annurev-ecolsys-102710-145028openalex-snapshot
Evolution of Anopheles gambiae in Relation to Humans and Malaria
inferredcites →https://doi.org/10.1371/journal.pbio.1000501openalex-snapshot
How and Why Chromosome Inversions Evolve
inferredcites →https://doi.org/10.1371/journal.pbio.1001473openalex-snapshot
The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome with 16,000 Tiny Chromosomes
inferredcites →https://doi.org/10.1371/journal.pgen.0010056openalex-snapshot
Discovery of Human Inversion Polymorphisms by Comparative Analysis of Human and Chimpanzee DNA Sequence Assemblies
inferredcites →https://doi.org/10.1371/journal.pgen.1000391openalex-snapshot
Turnover of Sex Chromosomes in the Stickleback Fishes (Gasterosteidae)
inferredcites →https://doi.org/10.1371/journal.pgen.1003056openalex-snapshot
Population Genomics of Inversion Polymorphisms in Drosophila melanogaster
inferredcites →https://doi.org/10.1371/journal.pgen.1003232openalex-snapshot
Dynamic Large-Scale Chromosomal Rearrangements Fuel Rapid Adaptation in Yeast Populations
inferredcites →https://doi.org/10.1371/journal.pgen.1005237openalex-snapshot
Y Fuse? Sex Chromosome Fusions in Fishes and Reptiles
inferredcites →https://doi.org/10.1371/journal.pone.0034841openalex-snapshot
Adaptation to Aridity in the Malaria Mosquito Anopheles gambiae: Chromosomal Inversion Polymorphism and Body Size Influence Resistance to Desiccation
inferredcites →https://doi.org/10.1534/genetics.105.047985openalex-snapshot
Chromosome Inversions, Local Adaptation and Speciation
inferredcites →https://doi.org/10.1534/genetics.107.084012openalex-snapshot
The Temporal Dynamics of Processes Underlying Y Chromosome Degeneration
inferredcites →https://doi.org/10.1534/genetics.110.118596openalex-snapshot
Transitions Between Male and Female Heterogamety Caused by Sex-Antagonistic Selection
inferredcites →https://doi.org/10.1534/genetics.111.137794openalex-snapshot
Ecological Genomics of Anopheles gambiae Along a Latitudinal Cline: A Population-Resequencing Approach
inferredcites →https://doi.org/10.1534/genetics.113.152397openalex-snapshot
Testing for the Footprint of Sexually Antagonistic Polymorphisms in the Pseudoautosomal Region of a Plant Sex Chromosome Pair
inferredcites →https://doi.org/10.1534/genetics.113.156026openalex-snapshot
Signatures of Sex-Antagonistic Selection on Recombining Sex Chromosomes
inferredcites →https://doi.org/10.2307/2412932openalex-snapshot
Modes of Speciation.
inferredcites →https://doi.org/10.3389/fgene.2014.00129openalex-snapshot
Adaptation through chromosomal inversions in Anopheles
inferredcites →https://doi.org/10.5281/zenodo.10742832openalex-snapshot
Genetics of the Evolutionary Process.
inferredcites →https://doi.org/10.5860/choice.32-0924openalex-snapshot
Species evolution: the role of chromosome change
inferredcites →https://doi.org/10.5860/choice.32-1518openalex-snapshot
Lords of the fly: Drosophila genetics and the experimental life

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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How Selection Acts on Chromosomal Inversions
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Prähistorische Reflexion 1: Höhlenzeit
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Beam Processing Techniques Applied to Crystal Silicon Substrates
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Do sex chromosomes of snakes, monitor lizards, and iguanian lizards result from multiple fission of an “ancestral amniote super-sex chromosome”?
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Y and W Chromosome Assemblies: Approaches and Discoveries
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Genomic metrics should inform formal conservation threat assessments
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Spatial population structure: patterns of adaptation in populations of the water hyacinth grasshopper Cornops aquaticum (Bruner 1906)
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Balancing selection via life-history trade-offs maintains an inversion polymorphism in a seaweed fly
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Evolution and expression patterns of the neo-sex chromosomes of the crested ibis
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Sexual size dimorphism in mammals is associated with changes in the size of gene families related to brain development
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Evolution of sex determination and heterogamety changes in section Otites of the genus Silene
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Marsupial chromosomics: bridging the gap between genomes and chromosomes
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Reconstruction of the birth of a male sex chromosome present in Atlantic herring
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How to manage without a Y chromosome
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Genomic origins and evolution of neo-sex chromosomes in Pacific Island birds
inferred← citeshttps://doi.org/10.1086/719656openalex-snapshot
Parental Population Range Expansion before Secondary Contact Promotes Heterosis
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Shallow genetic divergence and distinct phenotypic differences between two Andean hummingbirds: Speciation with gene flow?
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Does divergence from normal patterns of integration increase as chromosomal fusions increase in number? A test on a house mouse hybrid zone
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Evolution of Young Sex Chromosomes in Two Dioecious Sister Plant Species with Distinct Sex Determination Systems
inferred← citeshttps://doi.org/10.1093/gbe/evz075openalex-snapshot
Sex Chromosome Turnover in Moths of the Diverse Superfamily Gelechioidea
inferred← citeshttps://doi.org/10.1093/jhered/esx077openalex-snapshot
Genetic Mapping and Phylogenetic Analysis Reveal Intraspecific Variation in Sex Chromosomes of the Virginian Strawberry
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Genomic Signatures of Sexual Conflict
inferred← citeshttps://doi.org/10.1093/jxb/erae173openalex-snapshot
Sexy ways: approaches to studying plant sex chromosomes
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Reconstructing the Evolutionary History of Chromosomal Races on Islands: A Genome-Wide Analysis of Natural House Mouse Populations
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Origin of a Giant Sex Chromosome
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Reconstruction of the Origin of a Neo-Y Sex Chromosome and Its Evolution in the Spotted Knifejaw,Oplegnathus punctatus
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The Genomic Landscapes of Desert Birds Form over Multiple Time Scales
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An Ancestral Balanced Inversion Polymorphism Confers Global Adaptation
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Evolution of Chromosomal Inversions across an Avian Radiation
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Genetic Interaction Network as an Important Determinant of Gene Order in Genome Evolution
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Has adaptation occurred in males and females since separate sexes evolved in the plantSilene latifolia?
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Intercontinental karyotype–environment parallelism supports a role for a chromosomal inversion in local adaptation in a seaweed fly
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Pleiotropic effects of sex-determining genes in the evolution of dioecy in two plant species
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The roles of gene duplications in the dynamics of evolutionary conflicts
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Evolution of master sex determiners: TGF-β signalling pathways at regulatory crossroads
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Multiple sex chromosomes in teleost fishes from a cytogenetic perspective: state of the art and future challenges
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Recombination Suppression is Unlikely to Contribute to Speciation in Sympatric Heliconius Butterflies
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Evolution of a sex megachromosome
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Shallow evolutionary divergence between two Andean hummingbirds: Speciation with gene flow?
inferred← citeshttps://doi.org/10.1101/278317openalex-snapshot
Karyotype-environment associations support a role for a chromosomal inversion in local adaptation in the seaweed fly Coelopa frigida
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Mutation accumulation in chromosomal inversions maintains wing pattern polymorphism in a butterfly
inferred← citeshttps://doi.org/10.1111/evo.14483openalex-snapshot
The relationship between sexual dimorphism and androgen response element proliferation in primate genomes
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A novel neo‐sex chromosome in Sylvietta brachyura (Macrosphenidae) adds to the extraordinary avian sex chromosome diversity among Sylvioidea songbirds
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How chromosomal inversions reorient the evolutionary process
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Gene flow and selection interact to promote adaptive divergence in regions of low recombination
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The adaptive significance of chromosomal inversion polymorphisms inDrosophila melanogaster
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Pervasive gene conversion in chromosomal inversion heterozygotes
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Influence of host plant, geography and pheromone strain on genomic differentiation in sympatric populations of Ostrinia nubilalis
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A migration-associated supergene reveals loss of biocomplexity in Atlantic cod
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Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
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Repeated translocation of a gene cassette drives sex-chromosome turnover in strawberries
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The evolution of separate sexes in waterhemp is associated with surprising chromosomal diversity and complexity
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Convergent evolution of linked mating-type loci in basidiomycete fungi
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Cytogenetics of the small-sized fish, Copeina guttata (Characiformes, Lebiasinidae): Novel insights into the karyotype differentiation of the family
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Sex Chromosome Evolution, Heterochiasmy, and Physiological QTL in the Salmonid Brook Charr Salvelinus fontinalis
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Chromosomal Speciation in the Genomics Era: Disentangling Phylogenetic Evolution of Rock-wallabies
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Suppressed Recombination of Sex Chromosomes Is Not Caused by Chromosomal Reciprocal Translocation in Spiny Frog (Quasipaa boulengeri)
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The Origin and Evolution of Chromosomal Reciprocal Translocation in Quasipaa boulengeri (Anura, Dicroglossidae)
inferred← citeshttps://doi.org/10.3390/biology11101500openalex-snapshot
Chromosome-Level Assembly of Male Opsariichthys bidens Genome Provides Insights into the Regulation of the GnRH Signaling Pathway and Genome Evolution
inferred← citeshttps://doi.org/10.3390/genes11040416openalex-snapshot
Turtle Insights into the Evolution of the Reptilian Karyotype and the Genomic Architecture of Sex Determination
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Varied Genomic Responses to Maladaptive Gene Flow and Their Evidence
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Additional file 10 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.6084/m9.figshare.14524543openalex-snapshot
Additional file 11 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.6084/m9.figshare.14524546openalex-snapshot
Additional file 12 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.6084/m9.figshare.14524558openalex-snapshot
Additional file 16 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.6084/m9.figshare.14524570openalex-snapshot
Additional file 2 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.6084/m9.figshare.14524573openalex-snapshot
Additional file 3 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.6084/m9.figshare.14524579openalex-snapshot
Additional file 5 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.6084/m9.figshare.14524585openalex-snapshot
Additional file 7 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.6084/m9.figshare.14524591openalex-snapshot
Additional file 9 of Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
inferred← citeshttps://doi.org/10.7717/peerj.5110openalex-snapshot
Gene buddies: linked balanced polymorphisms reinforce each other even in the absence of epistasis
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