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Mutation accumulation in chromosomal inversions maintains wing pattern polymorphism in a butterfly

https://doi.org/10.1101/736504
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-3-319-24277-4_9openalex-snapshot
Data Analysis
inferredcites →https://doi.org/10.1016/j.cub.2015.11.069openalex-snapshot
Divergence and Functional Degradation of a Sex Chromosome-like Supergene
inferredcites →https://doi.org/10.1016/j.cub.2018.04.072openalex-snapshot
Supergene Evolution Triggered by the Introgression of a Chromosomal Inversion
inferredcites →https://doi.org/10.1016/j.tree.2018.12.005openalex-snapshot
Evolving Inversions
inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot
Basic Local Alignment Search Tool
inferredcites →https://doi.org/10.1016/s0022-5193(75)80082-8openalex-snapshot
Theoretical genetics of batesian mimicry II. Evolution of supergenes
inferredcites →https://doi.org/10.1038/380240a0openalex-snapshot
The rock–paper–scissors game and the evolution of alternative male strategies
inferredcites →https://doi.org/10.1038/nature10341openalex-snapshot
Chromosomal rearrangements maintain a polymorphic supergene controlling butterfly mimicry
inferredcites →https://doi.org/10.1038/nature11832openalex-snapshot
A Y-like social chromosome causes alternative colony organization in fire ants
inferredcites →https://doi.org/10.1038/nature13112openalex-snapshot
doublesex is a mimicry supergene
inferredcites →https://doi.org/10.1038/nature17961openalex-snapshot
The gene cortex controls mimicry and crypsis in butterflies and moths
inferredcites →https://doi.org/10.1038/ng.3430openalex-snapshot
Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax)
inferredcites →https://doi.org/10.1038/ng.3443openalex-snapshot
A supergene determines highly divergent male reproductive morphs in the ruff
inferredcites →https://doi.org/10.1038/ng.806openalex-snapshot
A framework for variation discovery and genotyping using next-generation DNA sequencing data
inferredcites →https://doi.org/10.1038/nplants.2016.188openalex-snapshot
Genetic architecture and evolution of the S locus supergene in Primula vulgaris
inferredcites →https://doi.org/10.1073/pnas.1207833109openalex-snapshot
Sequencing papaya X and Y h chromosomes reveals molecular basis of incipient sex chromosome evolution
inferredcites →https://doi.org/10.1073/pnas.1519216113openalex-snapshot
Warning signals are under positive frequency-dependent selection in nature
inferredcites →https://doi.org/10.1073/pnas.1702482114openalex-snapshot
Polymorphism at a mimicry supergene maintained by opposing frequency-dependent selection pressures
inferredcites →https://doi.org/10.1073/pnas.1801779115openalex-snapshot
Life history variation is maintained by fitness trade-offs and negative frequency-dependent selection
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot
edgeR : a Bioconductor package for differential expression analysis of digital gene expression data
inferredcites →https://doi.org/10.1093/bioinformatics/btr330openalex-snapshot
The variant call format and VCFtools
inferredcites →https://doi.org/10.1093/bioinformatics/bts606openalex-snapshot
A high-performance computing toolset for relatedness and principal component analysis of SNP data
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/jhered/esw041openalex-snapshot
The Evolution of Genome Structure by Natural and Sexual Selection
inferredcites →https://doi.org/10.1093/molbev/msh112openalex-snapshot
A Bayesian Mixture Model for Across-Site Heterogeneities in the Amino-Acid Replacement Process
inferredcites →https://doi.org/10.1093/molbev/msq249openalex-snapshot
Estimation of the Neutrality Index
inferredcites →https://doi.org/10.1093/molbev/msy236openalex-snapshot
Degenerative Expansion of a Young Supergene
inferredcites →https://doi.org/10.1098/rspb.2016.2806openalex-snapshot
Sex chromosome evolution: historical insights and future perspectives
inferredcites →https://doi.org/10.1101/gr.111120.110openalex-snapshot
Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads
inferredcites →https://doi.org/10.1101/gr.113985.110openalex-snapshot
Adaptive seeds tame genomic sequence comparison
inferredcites →https://doi.org/10.1101/gr.214874.116openalex-snapshot
Direct determination of diploid genome sequences
inferredcites →https://doi.org/10.1101/gr.236273.118openalex-snapshot
Chromosome assembly of large and complex genomes using multiple references
inferredcites →https://doi.org/10.1101/gr.6743907openalex-snapshot
MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes
inferredcites →https://doi.org/10.1104/pp.113.230144openalex-snapshot
MAKER-P: A Tool Kit for the Rapid Creation, Management, and Quality Control of Plant Genome Annotations
inferredcites →https://doi.org/10.1111/j.0014-3820.2006.tb00499.xopenalex-snapshot
THE EVOLUTION OF GENETIC ARCHITECTURE UNDER FREQUENCY-DEPENDENT DISRUPTIVE SELECTION
inferredcites →https://doi.org/10.1111/mec.14051openalex-snapshot
Genetic architecture and balancing selection: the life and death of differentiated variants
inferredcites →https://doi.org/10.1186/s13227-019-0129-2openalex-snapshot
Unravelling the genes forming the wing pattern supergene in the polymorphic butterfly Heliconius numata
inferredcites →https://doi.org/10.1186/s13227-019-0132-7openalex-snapshot
Bar, stripe and spot development in sand-dwelling cichlids from Lake Malawi
inferredcites →https://doi.org/10.1371/journal.pbio.1000501openalex-snapshot
How and Why Chromosome Inversions Evolve
inferredcites →https://doi.org/10.1534/g3.115.023655openalex-snapshot
Major Improvements to the Heliconius melpomene Genome Assembly Used to Confirm 10 Chromosome Fusion Events in 6 Million Years of Butterfly Evolution
inferredcites →https://doi.org/10.18637/jss.v067.i01openalex-snapshot
Fitting Linear Mixed-Effects Models Using lme4
inferredcites →https://doi.org/10.2144/000114460openalex-snapshot
Extraction of High-Molecular-Weight Genomic DNA for Long-Read Sequencing of Single Molecules
inferredcites →https://doi.org/10.4161/fly.19695openalex-snapshot
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
inferredcites →https://doi.org/10.5962/bhl.title.27468openalex-snapshot
The genetical theory of natural selection

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.tree.2020.03.002openalex-snapshot
A Roadmap for Understanding the Evolutionary Significance of Structural Genomic Variation
inferred← citeshttps://doi.org/10.1016/j.tree.2020.04.007openalex-snapshot
The Persistence of Polymorphisms across Species Radiations
inferred← citeshttps://doi.org/10.1038/s41559-021-01626-6openalex-snapshot
A masculinizing supergene underlies an exaggerated male reproductive morph in a spider
inferred← citeshttps://doi.org/10.1038/s41576-020-0234-zopenalex-snapshot
The genomics of coloration provides insights into adaptive evolution
inferred← citeshttps://doi.org/10.1038/s41598-020-78055-1openalex-snapshot
Batesian mimicry has evolved with deleterious effects of the pleiotropic gene doublesex
inferred← citeshttps://doi.org/10.1086/716509openalex-snapshot
When Do Opposites Attract? A Model Uncovering the Evolution of Disassortative Mating
inferred← citeshttps://doi.org/10.1093/jhered/esaa020openalex-snapshot
Consequences of Single-Locus and Tightly Linked Genomic Architectures for Evolutionary Responses to Environmental Change
inferred← citeshttps://doi.org/10.1098/rstb.2021.0200openalex-snapshot
Inversion invasions: when the genetic basis of local adaptation is concentrated within inversions in the face of gene flow
inferred← citeshttps://doi.org/10.1101/2020.11.19.389577openalex-snapshot
Admixture can readily lead to the formation of supergenes
inferred← citeshttps://doi.org/10.1101/2023.04.13.536688openalex-snapshot
Positive and negative frequency-dependent selection acting on polymorphism in a palatable moth
inferred← citeshttps://doi.org/10.1101/606012openalex-snapshot
Deleterious Mutation Accumulation and the Long-Term Fate of Chromosomal Inversions
inferred← citeshttps://doi.org/10.1101/864975openalex-snapshot
Demographic history and genomics of local adaptation in blue tit populations
inferred← citeshttps://doi.org/10.1111/1755-0998.13551openalex-snapshot
An accurate assignment test for extremely low‐coverage whole‐genome sequence data
inferred← citeshttps://doi.org/10.1111/eva.13035openalex-snapshot
Demographic history and genomics of local adaptation in blue tit populations
inferred← citeshttps://doi.org/10.1111/evo.14129openalex-snapshot
Evolution and genetic architecture of disassortative mating at a locus under heterozygote advantage
inferred← citeshttps://doi.org/10.1111/mec.16307openalex-snapshot
Environmentally associated chromosomal structural variation influences fine‐scale population structure of Atlantic Salmon (Salmo salar)
inferred← citeshttps://doi.org/10.1146/annurev-animal-050422-092520openalex-snapshot
Interrogating the Roles of Mutation–Selection Balance, Heterozygote Advantage, and Linked Selection in Maintaining Recessive Lethal Variation in Natural Populations
inferred← citeshttps://doi.org/10.24072/pci.evolbiol.100109openalex-snapshot
Evolutionary insights into disassortative mating and its association to an ecologically relevant supergene
inferred← citeshttps://doi.org/10.47749/t/unicamp.2020.1127249openalex-snapshot
Population genetics of the white sand ecosystem specialist butterfly Heliconius hermathena (Lepidoptera:Nymphalidae) assessed by mitogenome analysis
inferred← citeshttps://doi.org/10.70675/d444c892zebb3z4f09zb27czb6ca28a76bc0openalex-snapshot
Evolution of non-recombining region in mating-type chromosome from the fungal genus Microbotryum
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