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Parallel Evolution of Ameloblastic scpp Genes in Bony and Cartilaginous Vertebrates

https://doi.org/10.1093/molbev/msac099
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Ontogenetic development of an exceptionally preserved Devonian cartilaginous skeleton
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Identification, characterization, and expression of dentin matrix protein 1 gene in Xenopus laevis
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SCPP genes in the coelacanth: Tissue mineralization genes shared by sarcopterygians
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SCPP Genes and Their Relatives in Gar: Rapid Expansion of Mineralization Genes in Osteichthyans
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The homology and phylogeny of chondrichthyan tooth enameloid
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Convergent evolution of major histocompatibility complex molecules in humans and New World monkeys
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inferredcites →https://doi.org/10.1016/j.bone.2014.05.020openalex-snapshot
Osteopontin binds multiple calcium ions with high affinity and independently of phosphorylation status
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Endochondral bone in an Early Devonian ‘placoderm’ from Mongolia
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Specific ablation of mouse Fam20C in cells expressing type I collagen leads to skeletal defects and hypophosphatemia
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Evolutionary analyses reveal independent origins of gene repertoires and structural motifs associated to fast inactivation in calcium-selective TRPV channels
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Recent evolution of the salivary mucin MUC7
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Genetic basis for the evolution of vertebrate mineralized tissue
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Phenogenetic drift in evolution: The changing genetic basis of vertebrate teeth
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Mineralized tissue and vertebrate evolution: The secretory calcium-binding phosphoprotein gene cluster
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Amelogenin phosphorylation regulates tooth enamel formation by stabilizing a transient amorphous mineral precursor
inferredcites →https://doi.org/10.1080/02724634.1998.10011091openalex-snapshot
The histological structure of the endoskeleton in galeaspids (Galeaspida, Vertebrata)
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New Genes and Functional Innovation in Mammals
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Gene Turnover and Diversification of the α- and β-Globin Gene Families in Sauropsid Vertebrates
inferredcites →https://doi.org/10.1093/molbev/msaa326openalex-snapshot
The American Paddlefish Genome Provides Novel Insights into Chromosomal Evolution and Bone Mineralization in Early Vertebrates
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Tunicates Illuminate the Enigmatic Evolution of Chordate Metallothioneins by Gene Gains and Losses, Independent Modular Expansions, and Functional Convergences
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PAML 4: Phylogenetic Analysis by Maximum Likelihood
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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
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MACSE v2: Toolkit for the Alignment of Coding Sequences Accounting for Frameshifts and Stop Codons
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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
inferredcites →https://doi.org/10.1093/nar/gkg563openalex-snapshot
ExPASy: the proteomics server for in-depth protein knowledge and analysis
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inferredcites →https://doi.org/10.1098/rspb.2012.2963openalex-snapshot
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inferredcites →https://doi.org/10.1101/gr.2972804openalex-snapshot
Coelacanth genome sequence reveals the evolutionary history of vertebrate genes
inferredcites →https://doi.org/10.1111/ede.12072openalex-snapshot
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inferredcites →https://doi.org/10.1111/ede.12104openalex-snapshot
Embryonic development of fin spines in Callorhinchus milii (Holocephali); implications for chondrichthyan fin spine evolution
inferredcites →https://doi.org/10.1111/joa.13070openalex-snapshot
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inferredcites →https://doi.org/10.1126/science.1217817openalex-snapshot
Secreted Kinase Phosphorylates Extracellular Proteins That Regulate Biomineralization
inferredcites →https://doi.org/10.1159/000102678openalex-snapshot
Gene Duplication and the Evolution of Vertebrate Skeletal Mineralization
inferredcites →https://doi.org/10.1159/000324225openalex-snapshot
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inferredcites →https://doi.org/10.1177/002215549704500607openalex-snapshot
Cloning and Expression of Murine SC1, a Gene Product Homologous to SPARC
inferredcites →https://doi.org/10.1186/1471-2105-8-382openalex-snapshot
XSTREAM: A practical algorithm for identification and architecture modeling of tandem repeats in protein sequences
inferredcites →https://doi.org/10.1186/s12862-015-0329-xopenalex-snapshot
Amelotin: an enamel matrix protein that experienced distinct evolutionary histories in amphibians, sauropsids and mammals
inferredcites →https://doi.org/10.1186/s12862-018-1131-3openalex-snapshot
MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation
inferredcites →https://doi.org/10.1186/s12862-018-1241-yopenalex-snapshot
Evolution of dental tissue mineralization: an analysis of the jawed vertebrate SPARC and SPARC-L families
inferredcites →https://doi.org/10.1186/s12862-019-1350-2openalex-snapshot
Evaluating the usefulness of alignment filtering methods to reduce the impact of errors on evolutionary inferences
inferredcites →https://doi.org/10.1186/s12915-021-01191-1openalex-snapshot
Co-option of the same ancestral gene family gave rise to mammalian and reptilian toxins
inferredcites →https://doi.org/10.1186/s13227-015-0024-4openalex-snapshot
Comparative expression of the four enamel matrix protein genes, amelogenin, ameloblastin, enamelin and amelotin during amelogenesis in the lizard Anolis carolinensis
inferredcites →https://doi.org/10.3109/03008209809023909openalex-snapshot
Developmental Regulation of Dentin Sialophosphoprotein during Ameloblast Differentiation: A Potential Enamel Matrix Nucleator
inferredcites →https://doi.org/10.3389/fevo.2021.660767openalex-snapshot
Diversity and Evolution of Mineralized Skeletal Tissues in Chondrichthyans
inferredcites →https://doi.org/10.3390/ijms18112432openalex-snapshot
A Genomic Survey of SCPP Family Genes in Fishes Provides Novel Insights into the Evolution of Fish Scales
inferredcites →https://doi.org/10.3390/ijms22126626openalex-snapshot
Functions of Matricellular Proteins in Dental Tissues and Their Emerging Roles in Orofacial Tissue Development, Maintenance, and Disease

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4755772openalex-extracted
Cross-Validation of Conserved Osteoblast-Specific Enhancers Illuminates Bone Diseases and Early Skeletal Evolution
inferred← citeshttps://doi.org/10.1002/jez.b.23183openalex-snapshot
Ganoin and acrodin formation on scales and teeth in spotted gar: A vital role of enamelin in the unique process of enamel mineralization
inferred← citeshttps://doi.org/10.1016/j.cdev.2024.203924openalex-snapshot
Xenopus tropicalis osteoblast-specific open chromatin regions reveal promoters and enhancers involved in human skeletal phenotypes and shed light on early vertebrate evolution
inferred← citeshttps://doi.org/10.1016/j.mocell.2026.100377openalex-snapshot
scpp5 regulates tooth development and injury-induced repair in zebrafish through mineralization and Wnt/β-catenin signaling
inferred← citeshttps://doi.org/10.1016/j.ydbio.2024.08.009openalex-snapshot
Evolution, development, and regeneration of tooth-like epithelial appendages in sharks
inferred← citeshttps://doi.org/10.1093/g3journal/jkaf003openalex-snapshot
The vertebrate small leucine-rich proteoglycans: amplification of a clustered gene family and evolution of their transcriptional profile in jawed vertebrates
inferred← citeshttps://doi.org/10.1093/jbmr/zjaf062openalex-snapshot
Functions of secretory calcium-binding phosphoproteins in dental mineralization
inferred← citeshttps://doi.org/10.1101/2023.08.30.555543openalex-snapshot
Architecture and evolutionary conservation of Xenopus tropicalis osteoblast-specific regulatory regions shed light on bone diseases and early skeletal evolution
inferred← citeshttps://doi.org/10.1101/2024.02.14.580359openalex-snapshot
Emergence of saliva protein genes in the secretory calcium-binding phosphoprotein (SCPP) locus and accelerated evolution in primates
inferred← citeshttps://doi.org/10.1111/brv.13173openalex-snapshot
Paleo‐evo‐devo implications of a revised conceptualization of enameloids and enamels
inferred← citeshttps://doi.org/10.1186/s12915-026-02593-9openalex-snapshot
Transcriptomic signature of differentiating catshark cartilage unravels the co-evolution of the Spp2 gene family with skeletal mineralisation in cartilaginous fish
inferred← citeshttps://doi.org/10.1371/journal.pone.0272860openalex-snapshot
Dental structure and tooth attachment modes in the common fangtooth Anoplogaster cornuta (Valenciennes, 1833) (Actinopterygii; Trachichthyiformes; Anoplogastridae)
inferred← citeshttps://doi.org/10.7554/elife.94900openalex-snapshot
The holocephalan ratfish endoskeleton shares trabecular and areolar mineralization patterns, but not tesserae, with elasmobranchs little skate and catshark
inferred← citeshttps://doi.org/10.7554/elife.94900.1openalex-snapshot
Extant cartilaginous fishes share trabecular and areolar mineralization patterns, but not tesserae, and evidence for a paedomorphic chimaera skeleton
inferred← citeshttps://doi.org/10.7554/elife.94900.4openalex-snapshot
The holocephalan ratfish endoskeleton shares trabecular and areolar mineralization patterns, but not tesserae, with elasmobranchs little skate and catshark
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