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Killer Whale Nuclear Genome and mtDNA Reveal Widespread Population Bottleneck during the Last Glacial Maximum
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Estimating abundance of killer whales in the nearshore waters of the Gulf of Alaska and Aleutian Islands using line-transect sampling
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Terrigenous input and paleoproductivity in the Southern Ocean
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Mechanisms and variations of the paleoproductivity off northern Chile (24°S–33°S) during the last 40,000 years
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The Benguela upwelling related to the Miocene cooling events and the development of the Antarctic Circumpolar Current: Evidence from calcareous dinoflagellate cysts
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Contribution of Southern Ocean surface-water stratification to low atmospheric CO2 concentrations during the last glacial period
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Inference of human population history from individual whole-genome sequences
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Predicted habitat shifts of Pacific top predators in a changing climate
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Ancient DNA reveals that bowhead whale lineages survived Late Pleistocene climate change and habitat shifts
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The tiger genome and comparative analysis with lion and snow leopard genomes
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Lack of phylogeography in European mammals before the last glaciation
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DNA evidence for historic population size and past ecosystem impacts of gray whales
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Kelp genes reveal effects of subantarctic sea ice during the Last Glacial Maximum
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DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
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Fast and accurate short read alignment with Burrows–Wheeler transform
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The Sequence Alignment/Map format and SAMtools
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Savant: genome browser for high-throughput sequencing data
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The variant call format and VCFtools
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Low genetic variation among killer whales (Orcinus orca) in the eastern North Pacific and genetic differentiation between foraging specialists
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Mitochondrial mismatch analysis is insensitive to the mutational process
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Time Dependency of Molecular Rate Estimates and Systematic Overestimation of Recent Divergence Times
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Evolution of Population Structure in a Highly Social Top Predator, the Killer Whale
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Big and Slow: Phylogenetic Estimates of Molecular Evolution in Baleen Whales (Suborder Mysticeti)
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Relaxed Clocks and Inferences of Heterogeneous Patterns of Nucleotide Substitution and Divergence Time Estimates across Whales and Dolphins (Mammalia: Cetacea)
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Radiation of Extant Cetaceans Driven by Restructuring of the Oceans
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Mitochondrial sequence divergence among Antarctic killer whale ecotypes is consistent with multiple species
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Genetic differentiation between parapatric ‘nearshore’ and ‘offshore’ populations of the bottlenose dolphin
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Low worldwide genetic diversity in the killer whale (Orcinus orca): implications for demographic history
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Habitat structure and the dispersal of male and female bottlenose dolphins ( Tursiops truncatus )
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Dolphin genome provides evidence for adaptive evolution of nervous system genes and a molecular rate slowdown
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Genetic consequences of climatic oscillations in the Quaternary
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Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species.
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Top predators and biodiversity: much debate, few data
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Genetic differentiation among North Atlantic killer whale populations
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Influences of past climatic changes on historical population structure and demography of a cosmopolitan marine predator, the common dolphin (genus D elphinus )
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Social cohesion among kin, gene flow without dispersal and the evolution of population genetic structure in the killer whale (Orcinus orca)
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Diversity of deep‐water cetaceans in relation to temperature: implications for ocean warming
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Estimated field metabolic rates and prey requirements of resident killer whales
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Collapse of the California Current During Glacial Maxima Linked to Climate Change on Land
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Rise and Fall of the Beringian Steppe Bison
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Assessing the Causes of Late Pleistocene Extinctions on the Continents
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Cascading Effects of the Loss of Apex Predatory Sharks from a Coastal Ocean
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Foraminiferal Isotope Evidence of Reduced Nitrogen Fixation in the Ice Age Atlantic Ocean
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Cultural Selection and Genetic Diversity in Matrilineal Whales
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Upwelling Intensification As Part of the Pliocene-Pleistocene Climate Transition
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Pliocene–Pleistocene variability of upwelling activity, productivity, and nutrient cycling in the Benguela region
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Global Changes During the Last 3 Million Years: Climatic Controls and Biotic Responses
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Karyotype stability in marine mammals
inferredcites →https://doi.org/10.1177/104063879600800302openalex-snapshot
Morbilliviral Epizootic in Bottlenose Dolphins of the Gulf of Mexico
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Arlequin (version 3.0): An integrated software package for population genetics data analysis
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The rhesus macaque is three times as diverse but more closely equivalent in damaging coding variation as compared to the human
inferredcites →https://doi.org/10.1186/gb-2011-12-7-r63openalex-snapshot
Genome sequence and global sequence variation map with 5.5 million SNPs in Chinese rhesus macaque
inferredcites →https://doi.org/10.1371/journal.pgen.1000554openalex-snapshot
Rapid Response of a Marine Mammal Species to Holocene Climate and Habitat Change
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Population structure and mating patterns of Killer Whales (Orcinus orca) as revealed by DNA analysis
inferredcites →https://doi.org/10.1644/06-mamm-a-118r1.1openalex-snapshot
A Dwarf Form of Killer Whale in Antarctica
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Killer whales in South African waters—a review of their biology
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A review and tests of hypotheses about causes of the KwaZulu-Natal sardine run
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Improved characterisation of among-lineage rate variation in cetacean mitogenomes using codon-partitioned relaxed clocks
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Climate change and a poleward shift in the distribution of the Pacific white-sided dolphin in the northeastern Pacific
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Thriving and declining: climate variability shaping life-history and population persistence of Mesodesma donacium in the Humboldt Upwelling System
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Killer whale (Orcinus orca) occurrence off Peru, 1995-2003
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Marine mammal biology: an evolutionary approach
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Revised taxonomy of eastern North Pacific killer whales ( Orcinus orca ): Bigg’s and resident ecotypes deserve species status
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Genetic and cultural evidence suggests a refugium for killer whales off Japan during the Last Glacial Maximum
inferred← citeshttps://doi.org/10.1002/ece3.4646openalex-snapshot
Killer whales ( Orcinus orca ) in Iceland show weak genetic structure among diverse isotopic signatures and observed movement patterns
inferred← citeshttps://doi.org/10.1002/ece3.5813openalex-snapshot
Evolutionary impacts differ between two exploited populations of northern bottlenose whale (Hyperoodon ampullatus)
inferred← citeshttps://doi.org/10.1002/ece3.8104openalex-snapshot
50,000 years of ice and seals: Impacts of the Last Glacial Maximum on Antarctic fur seals
inferred← citeshttps://doi.org/10.1002/ece3.8911openalex-snapshot
Biogeography pattern of the marine angiosperm Cymodocea nodosa in the eastern Mediterranean Sea related to the quaternary climatic changes
inferred← citeshttps://doi.org/10.1002/lol2.70005openalex-snapshot
Impact of glacial cycles and ocean currents on radiation events in the Japanese turban snail Lunella coreensis
inferred← citeshttps://doi.org/10.1007/s10519-017-9840-8openalex-snapshot
Cultural Hitchhiking in the Matrilineal Whales
inferred← citeshttps://doi.org/10.1007/s10592-022-01469-zopenalex-snapshot
Demographic history of two endangered Atlantic eel species, Anguilla anguilla and Anguilla rostrata
inferred← citeshttps://doi.org/10.1007/s11692-015-9309-8openalex-snapshot
Drivers of Population Structure of the Bottlenose Dolphin (Tursiops truncatus) in the Eastern Mediterranean Sea
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Effects of Environmental Variation in Structuring Population Genetic Variation in the False-Water Cobras (Xenodontinae: Hydrodynastes)
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Genetics and Genomics
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Geographic and temporal variation in persistent pollutants in Australian humpback and snubfin dolphins
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Genomic insights into the Montseny brook newt (Calotriton arnoldi), a Critically Endangered glacial relict
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Revisiting Paleoindian exploitation of extinct North American mammals
inferred← citeshttps://doi.org/10.1016/j.ympev.2017.12.027openalex-snapshot
Cryptic lineage differentiation among Indo-Pacific bottlenose dolphins (Tursiops aduncus) in the northwest Indian Ocean
inferred← citeshttps://doi.org/10.1016/j.ympev.2020.106756openalex-snapshot
Phylogenomics of the genus Tursiops and closely related Delphininae reveals extensive reticulation among lineages and provides inference about eco-evolutionary drivers
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Phylogenomics of the killer whale indicates ecotype divergence in sympatry
inferred← citeshttps://doi.org/10.1038/hdy.2015.45openalex-snapshot
Resource specialisation and the divergence of killer whale populations
inferred← citeshttps://doi.org/10.1038/hdy.2016.112openalex-snapshot
Killer whales differentiating in geographic sympatry facilitated by divergent behavioural traditions
inferred← citeshttps://doi.org/10.1038/ncomms11693openalex-snapshot
Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
inferred← citeshttps://doi.org/10.1073/pnas.1620736114openalex-snapshot
Gene–culture coevolution in whales and dolphins
inferred← citeshttps://doi.org/10.1093/biolinnean/blae081openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/eva.13147openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/jbi.15159openalex-snapshot
Complete Mitochondrial Genomes Provide Evidence of a Killer Whale Refugium Off the Coast of Japan During the Last Glacial Maximum
inferred← citeshttps://doi.org/10.1111/mec.12929openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.13284openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.13496openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.13638openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.13827openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.14217openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.14860openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.16137openalex-snapshot
Runs of homozygosity in killer whale genomes provide a global record of demographic histories
inferred← citeshttps://doi.org/10.1111/mec.16643openalex-snapshot
Genomics reveal population structure, evolutionary history, and signatures of selection in the northern bottlenose whale, Hyperoodon ampullatus
inferred← citeshttps://doi.org/10.1111/mec.16797openalex-snapshot
Genomics reveals a genetically isolated population of the Pacific white‐sided dolphin ( Lagenorhynchus obliquidens ) distributed in the Sea of Japan
inferred← citeshttps://doi.org/10.1111/mec.16898openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/mec.70182openalex-snapshot
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inferred← citeshttps://doi.org/10.1126/science.abm1742openalex-snapshot
The critically endangered vaquita is not doomed to extinction by inbreeding depression
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inferred← citeshttps://doi.org/10.1186/s12862-016-0630-3openalex-snapshot
Contrasting responses to a climate regime change by sympatric, ice-dependent predators
inferred← citeshttps://doi.org/10.1186/s12862-018-1204-3openalex-snapshot
The inference of gray whale (Eschrichtius robustus) historical population attributes from whole-genome sequences
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inferred← citeshttps://doi.org/10.1534/genetics.115.179861openalex-snapshot
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inferred← citeshttps://doi.org/10.18632/aging.100699openalex-snapshot
The transcriptome of the bowhead whale Balaena mysticetus reveals adaptations of the longest-lived mammal
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1424001/v1openalex-snapshot
Demographic history of two endangered Atlantic eel species, Anguilla anguilla and A. rostrata
inferred← citeshttps://doi.org/10.2989/1814232x.2014.923783openalex-snapshot
Confirmation of the occurrence of a second killer whale morphotype in South African waters
inferred← citeshttps://doi.org/10.2989/1814232x.2016.1191042openalex-snapshot
Distribution and seasonal abundance of large cetaceans in the Durban whaling grounds off KwaZulu-Natal, South Africa, 1972–1975
inferred← citeshttps://doi.org/10.3354/esr01507openalex-snapshot
Contrasting population structure patterns at different genetic boundaries in an endangered marine dolphin
inferred← citeshttps://doi.org/10.3354/meps13268openalex-snapshot
Population genetic diversity and historical dynamics of Fraser’s dolphins Lagenodelphis hosei
inferred← citeshttps://doi.org/10.3389/fmars.2024.1460314openalex-snapshot
Killer whales in the Gulf of Mexico and North Atlantic off the Southeastern United States
inferred← citeshttps://doi.org/10.3390/d17100692openalex-snapshot
Marine Mammals’ Fauna Detection via eDNA Methodology in Pagasitikos Gulf (Greece)
inferred← citeshttps://doi.org/10.3390/genes15081012openalex-snapshot
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Guidelines for genetic data analysis
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Genetic divergence and fine scale population structure of the common bottlenose dolphin (Tursiops truncatus, Montagu) found in the Gulf of Guayaquil, Ecuador
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