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Power of Bayesian and Heuristic Tests to Detect Cross-Species Introgression with Reference to Gene Flow in the Tamias quadrivittatus Group of North American Chipmunks
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Robbery in progress: Historical museum collections bring to light a mitochondrial capture within a bird species widespread across southern Australia, the Copperback Quail‐thrush Cinclosoma clarum
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Introgression at differentially aged hybrid zones in red-tailed chipmunks
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Evolutionary Biology: How Did the Human Species Form?
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The Roles of Introgression and Climate Change in the Rise to Dominance of Acropora Corals
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Interpreting the genomic landscape of introgression
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Divergence with gene flow within the recent chipmunk radiation (Tamias)
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The genomic landscape of species divergence in Ficedula flycatchers
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Bayesian inference of ancient human demography from individual genome sequences
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The evolutionary history of bears is characterized by gene flow across species
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Phylogeography of the red‐tailed chipmunk (Tamias ruficaudus), a northern Rocky Mountain endemic
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Bayesian species delimitation using multilocus sequence data
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Borrowed alleles and convergence in serpentine adaptation
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Asymptotic Properties of Maximum Likelihood Estimators and Likelihood Ratio Tests Under Nonstandard Conditions
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Computing Bayes Factors Using a Generalization of the Savage-Dickey Density Ratio
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Computing Bayes Factors Using Thermodynamic Integration
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Computational Molecular Evolution
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Molecular Evolution
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Quartet Inference from SNP Data Under the Coalescent Model
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ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes
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Reversible Jump Markov Chain Monte Carlo Computation and Bayesian Model Determination
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The BPP program for species tree estimation and species delimitation
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Genome-Scale Data Reveal Deep Lineage Divergence and a Complex Demographic History in the Texas Horned Lizard (Phrynosoma cornutum) throughout the Southwestern and Central United States
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Comparative Phylogenomic Assessment of Mitochondrial Introgression among Several Species of Chipmunks ( TAMIAS )
inferredcites →https://doi.org/10.1093/genetics/158.2.885openalex-snapshot
Distinguishing Migration From Isolation: A Markov Chain Monte Carlo Approach
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A Simulation Study to Examine the Information Content in Phylogenomic Data Sets under the Multispecies Coalescent Model
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Complexity of the simplest species tree problem
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Estimation of Hominoid Ancestral Population Sizes under Bayesian Coalescent Models Incorporating Mutation Rate Variation and Sequencing Errors
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Bayesian Inference of Species Trees from Multilocus Data
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Maximum Likelihood Implementation of an Isolation-with-Migration Model with Three Species for Testing Speciation with Gene Flow
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Coalescent Analysis of Phylogenomic Data Confidently Resolves the Species Relationships in the Anopheles gambiae Species Complex
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Diversification, Introgression, and Rampant Cytonuclear Discordance in Rocky Mountains Chipmunks (Sciuridae: Tamias)
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Phase Resolution of Heterozygous Sites in Diploid Genomes is Important to Phylogenomic Analysis under the Multispecies Coalescent Model
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Phylogeny Estimation of the Radiation of Western North American Chipmunks (Tamias) in the Face of Introgression Using Reproductive Protein Genes
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The Influence of Gene Flow on Species Tree Estimation: A Simulation Study
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Maximum Likelihood Implementation of an Isolation-with-Migration Model for Three Species
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Efficient Bayesian Species Tree Inference under the Multispecies Coalescent
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Coestimating Reticulate Phylogenies and Gene Trees from Multilocus Sequence Data
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HyDe: A Python Package for Genome-Scale Hybridization Detection
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inferredcites →https://doi.org/10.1111/evo.13296openalex-snapshot
A reassessment of explanations for discordant introgressions of mitochondrial and nuclear genomes
inferredcites →https://doi.org/10.1111/j.0014-3820.2003.tb00597.xopenalex-snapshot
PHYLOGEOGRAPHY AND INTROGRESSIVE HYBRIDIZATION: CHIPMUNKS (GENUS TAMIAS) IN THE NORTHERN ROCKY MOUNTAINS
inferredcites →https://doi.org/10.1111/j.1365-294x.2007.03640.xopenalex-snapshot
Ancient hybridization and mitochondrial capture between two species of chipmunks
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A genomic perspective on hybridization and speciation
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The Weighted Likelihood Ratio, Linear Hypotheses on Normal Location Parameters
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Inferring Phylogenetic Networks with Maximum Pseudolikelihood under Incomplete Lineage Sorting
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Temporal genomic contrasts reveal rapid evolutionary responses in an alpine mammal during recent climate change
inferredcites →https://doi.org/10.1515/mammalia-2015-0004openalex-snapshot
Towards a uniform nomenclature for ground squirrels: the status of the Holarctic chipmunks
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Ancient Admixture in Human History
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Neandertal Admixture in Eurasia Confirmed by Maximum-Likelihood Analysis of Three Genomes
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Challenges in Species Tree Estimation Under the Multispecies Coalescent Model
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Density Estimation for Statistics and Data Analysis
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The Mammalian Baculum: Hypotheses on the Nature of Bacular Variability
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Mechanisms of Competitive Exclusion Between Two Species of Chipmunks
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Altitudinal Zonation of Chipmunks (Eutamias): Interspecific Aggression
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