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Accuracy and Precision of Species Trees: Effects of Locus, Individual, and Base Pair Sampling on Inference of Species Trees in Lizards of the Liolaemus darwinii Group (Squamata, Liolaemidae)

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Monte Desert (Argentina): insect biodiversity and natural areas

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Coalescent methods for estimating phylogenetic trees

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Estimating species trees using approximate Bayesian computation

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Sampling Strategies for Delimiting Species: Genes, Individuals, and Populations in the Liolaemus elongatus-kriegi Complex (Squamata: Liolaemidae) in Andean-Patagonian South America

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Inconsistency of Phylogenetic Estimates from Concatenated Data under Coalescence

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Multilocus Phylogenetics of a Rapid Radiation in the Genus Thomomys (Rodentia: Geomyidae)

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Comparison of Species Tree Methods for Reconstructing the Phylogeny of Bearded Manakins (Aves: Pipridae, Manacus) from Multilocus Sequence Data

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Comparison of Methods for Species-Tree Inference in the Sawfly Genus Neodiprion (Hymenoptera: Diprionidae)

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Clustal W and Clustal X version 2.0

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The Accuracy of Species Tree Estimation under Simulation: A Comparison of Methods

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inferredcites →https://doi.org/10.1093/sysbio/syr016openalex-snapshot

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inferredcites →https://doi.org/10.1109/tcbb.2008.66openalex-snapshot

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inferredcites →https://doi.org/10.1111/j.0014-3820.2004.tb00416.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1365-2699.2007.01770.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04650.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00549.xopenalex-snapshot

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Anonymous nuclear markers for Malagasy plated lizards (Zonosaurus)

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Population genetic analysis of ascertained SNP data

inferredcites →https://doi.org/10.1371/journal.pgen.0020068openalex-snapshot

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An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis

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Evolutionary Dynamics of Intron Size, Genome Size, and Physiological Correlates in Archosaurs

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1111/j.1558-5646.2012.01640.xopenalex-snapshot

SPECIES DELIMITATION WITH ABC AND OTHER COALESCENT-BASED METHODS: A TEST OF ACCURACY WITH SIMULATIONS AND AN EMPIRICAL EXAMPLE WITH LIZARDS OF THE LIOLAEMUS DARWINII COMPLEX (SQUAMATA: LIOLAEMIDAE)

inferred← citeshttps://doi.org/10.1111/jbi.12118openalex-snapshot

Local representation of global diversity in a cosmopolitan lichen‐forming fungal species complex (Rhizoplaca, Ascomycota)

inferred← citeshttps://doi.org/10.1111/jeb.13004openalex-snapshot

Rate heterogeneity across Squamata, misleading ancestral state reconstruction and the importance of proper null model specification

inferred← citeshttps://doi.org/10.1111/jzs.12163openalex-snapshot

Phylogeographic history of Patagonian lizards of theLiolaemus elongatuscomplex (Iguania: Liolaemini) based on mitochondrial and nuclear DNA sequences

inferred← citeshttps://doi.org/10.1111/mec.12075openalex-snapshot

How lizards survived blizzards: phylogeography of the L iolaemus lineomaculatusgroup ( L iolaemidae) reveals multiple breaks and refugia in southern P atagonia and their concordance with other codistributed taxa

inferred← citeshttps://doi.org/10.1111/mec.13886openalex-snapshot

Phylogeography of the heavily poached A frican common pangolin (Pholidota, Manis tricuspis) reveals six cryptic lineages as traceable signatures of Pleistocene diversification

inferred← citeshttps://doi.org/10.1111/mec.14985openalex-snapshot

Historical demography of four gecko species specializing in boulder cave habitat: Implications in the evolutionary dead end hypothesis and conservation

inferred← citeshttps://doi.org/10.1111/zoj.12231openalex-snapshot

Model-based approach to test hard polytomies in theEulaemusclade of the most diverse South American lizard genusLiolaemus(Liolaemini, Squamata)

inferred← citeshttps://doi.org/10.1111/zsc.12053openalex-snapshot

Multilocus phylogeny of the widely distributed South American lizard clade E ulaemus (Liolaemini, Liolaemus)

inferred← citeshttps://doi.org/10.11606/t.91.2018.tde-14032018-110612openalex-snapshot

Evolutionary studies in South American marsh rats (Rodentia: Holochilus)

inferred← citeshttps://doi.org/10.1186/1471-2148-14-67openalex-snapshot

An empirical evaluation of two-stage species tree inference strategies using a multilocus dataset from North American pines

inferred← citeshttps://doi.org/10.1186/1742-9994-10-70openalex-snapshot

Phylogeographic analysis of the true lemurs (genus Eulemur) underlines the role of river catchments for the evolution of micro-endemism in Madagascar

inferred← citeshttps://doi.org/10.1186/s12862-015-0503-1openalex-snapshot

Comparing species tree estimation with large anchored phylogenomic and small Sanger-sequenced molecular datasets: an empirical study on Malagasy pseudoxyrhophiine snakes

inferred← citeshttps://doi.org/10.1186/s12862-017-1047-3openalex-snapshot

Gene flow during glacial habitat shifts facilitates character displacement in a Neotropical flycatcher radiation

inferred← citeshttps://doi.org/10.1371/journal.pone.0048358openalex-snapshot

Lizards on Ice: Evidence for Multiple Refugia in Liolaemus pictus (Liolaemidae) during the Last Glacial Maximum in the Southern Andean Beech Forests

inferred← citeshttps://doi.org/10.1371/journal.pone.0085240openalex-snapshot

Pleistocene Speciation in North American Lichenized Fungi and the Impact of Alternative Species Circumscriptions and Rates of Molecular Evolution on Divergence Estimates

inferred← citeshttps://doi.org/10.1371/journal.pone.0097556openalex-snapshot

How Do You Solve a Problem like Letharia? A New Look at Cryptic Species in Lichen-Forming Fungi Using Bayesian Clustering and SNPs from Multilocus Sequence Data

inferred← citeshttps://doi.org/10.1371/journal.pone.0121139openalex-snapshot

Assessing Species Boundaries Using Multilocus Species Delimitation in a Morphologically Conserved Group of Neotropical Freshwater Fishes, the Poecilia sphenops Species Complex (Poeciliidae)

inferred← citeshttps://doi.org/10.1371/journal.pone.0132358openalex-snapshot

Extreme Food-Plant Specialisation in Megabombus Bumblebees as a Product of Long Tongues Combined with Short Nesting Seasons

inferred← citeshttps://doi.org/10.1371/journal.pone.0225815openalex-snapshot

Description and phylogeny of a new species of Liolaemus (Iguania: Liolaemidae) endemic to the south of the Plurinational State of Bolivia

inferred← citeshttps://doi.org/10.1655/herpetologica-d-13-00083openalex-snapshot

Molecular Phylogeny of the Liolaemus kriegi Complex (Iguania, Liolaemini)

inferred← citeshttps://doi.org/10.1655/herpetologica-d-14-00067openalex-snapshot

Molecular Phylogeny of the Lizard Clade Leiosaurae Endemic to Southern South America

inferred← citeshttps://doi.org/10.2994/sajh-d-20-00045.1openalex-snapshot

Historical Biogeographic Reconstruction of the South American Liolaemus boulengeri Group (Iguania: Liolaemidae)

inferred← citeshttps://doi.org/10.31390/gradschool_dissertations.18openalex-snapshot

Model-based approaches to discovering diversity : new implementations, tests of adequacy and an empirical application to central American Diptera

inferred← citeshttps://doi.org/10.3732/ajb.1200146openalex-snapshot

Neogene‐dominated diversification in neotropical montane lichens: Dating divergence events in the lichen‐forming fungal genus Oropogon (Parmeliaceae)

inferred← citeshttps://doi.org/10.3897/zookeys.364.6109openalex-snapshot

Integrative taxonomy and preliminary assessment of species limits in the Liolaemus walkeri complex (Squamata, Liolaemidae) with descriptions of three new species from Peru

inferred← citeshttps://doi.org/10.70675/16a4b1fezdc18z4a53zb938z667ab690ce9bopenalex-snapshot

Écomorphologie et évolution phénotypique : méthodes et applications aux ruminants actuels et aux « ongulés » fossiles lors de la Crise de Salinité Messinienne à la limite Mio-Pliocène

inferred← citeshttps://doi.org/10.7287/peerj.5856v0.1/reviews/1openalex-snapshot

Peer Review #1 of "Uncovering hidden specific diversity of Andean glassfrogs of the Centrolene buckleyi species complex (Anura: Centrolenidae) (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.5856v0.1/reviews/2openalex-snapshot

Peer Review #2 of "Uncovering hidden specific diversity of Andean glassfrogs of the Centrolene buckleyi species complex (Anura: Centrolenidae) (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.5856v0.1/reviews/3openalex-snapshot

Peer Review #3 of "Uncovering hidden specific diversity of Andean glassfrogs of the Centrolene buckleyi species complex (Anura: Centrolenidae) (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.5856v0.2/reviews/2openalex-snapshot

Peer Review #2 of "Uncovering hidden specific diversity of Andean glassfrogs of the Centrolene buckleyi species complex (Anura: Centrolenidae) (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.5856v0.2/reviews/3openalex-snapshot

Peer Review #3 of "Uncovering hidden specific diversity of Andean glassfrogs of the Centrolene buckleyi species complex (Anura: Centrolenidae) (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.9249v0.1/reviews/1openalex-snapshot

Peer Review #1 of "Behavioral, morphological, and ecological trait evolution in two clades of New World Sparrows (Aimophila and Peucaea, Passerellidae) (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.9249v0.1/reviews/2openalex-snapshot

Peer Review #2 of "Behavioral, morphological, and ecological trait evolution in two clades of New World Sparrows (Aimophila and Peucaea, Passerellidae) (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.9249v0.1/reviews/3openalex-snapshot

Peer Review #3 of "Behavioral, morphological, and ecological trait evolution in two clades of New World Sparrows (Aimophila and Peucaea, Passerellidae) (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.9249v0.2/reviews/1openalex-snapshot

Peer Review #1 of "Behavioral, morphological, and ecological trait evolution in two clades of New World Sparrows (Aimophila and Peucaea, Passerellidae) (v0.2)"

inferred← citeshttps://doi.org/10.7717/peerj.3941openalex-snapshot

Phylogenomic analysis of the Chilean clade ofLiolaemuslizards (Squamata: Liolaemidae) based on sequence capture data

inferred← citeshttps://doi.org/10.7717/peerj.5856openalex-snapshot

Uncovering hidden specific diversity of Andean glassfrogs of the Centrolene buckleyi species complex (Anura: Centrolenidae)

inferred← citeshttps://doi.org/10.7717/peerj.9249openalex-snapshot

Behavioral, morphological, and ecological trait evolution in two clades of New World Sparrows ( Aimophila and Peucaea , Passerellidae)

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.