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Recurrent selection explains parallel evolution of genomic regions of high relative but low absolute differentiation in greenish warblers
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Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/ece3.1400openalex-snapshot
Evolution of leaf warbler songs (Aves: Phylloscopidae)
inferredcites →https://doi.org/10.1007/s10709-003-2738-9openalex-snapshot
Parallel genotypic adaptation: when evolution repeats itself
inferredcites →https://doi.org/10.1023/a:1013319217703openalex-snapshot
Ring species as bridges between microevolution and speciation
inferredcites →https://doi.org/10.1038/355817a0openalex-snapshot
Evolution of ecological differences in the Old World leaf warblers
inferredcites →https://doi.org/10.1038/hdy.2008.93openalex-snapshot
Speciation through evolution of sex-linked genes
inferredcites →https://doi.org/10.1038/hdy.2009.151openalex-snapshot
Islands of speciation or mirages in the desert? Examining the role of restricted recombination in maintaining species
inferredcites →https://doi.org/10.1038/hdy.2015.46openalex-snapshot
Z chromosome divergence, polymorphism and relative effective population size in a genus of lekking birds
inferredcites →https://doi.org/10.1038/nature11584openalex-snapshot
The genomic landscape of species divergence in Ficedula flycatchers
inferredcites →https://doi.org/10.1038/nature13285openalex-snapshot
Genomic divergence in a ring species complex
inferredcites →https://doi.org/10.1038/ncomms2833openalex-snapshot
Genomic islands of divergence are not affected by geography of speciation in sunflowers
inferredcites →https://doi.org/10.1038/sj.hdy.6884960openalex-snapshot
Indirect measures of gene flow and migration: FST≠1/(4Nm+1)
inferredcites →https://doi.org/10.1038/srep09607openalex-snapshot
Repeatability of evolution on epistatic landscapes
inferredcites →https://doi.org/10.1046/j.1420-9101.2001.00335.xopenalex-snapshot
The genic view of the process of speciation
inferredcites →https://doi.org/10.1073/pnas.1418892112openalex-snapshot
Adaptive introgression in an African malaria mosquito coincident with the increased usage of insecticide-treated bed nets
inferredcites →https://doi.org/10.1086/284701openalex-snapshot
The Relative Rates of Evolution of Sex Chromosomes and Autosomes
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot
Trimmomatic: a flexible trimmer for Illumina sequence data
inferredcites →https://doi.org/10.1093/genetics/134.4.1289openalex-snapshot
The effect of deleterious mutations on neutral molecular variation.
inferredcites →https://doi.org/10.1093/sysbio/sys004openalex-snapshot
Ultraconserved Elements Anchor Thousands of Genetic Markers Spanning Multiple Evolutionary Timescales
inferredcites →https://doi.org/10.1098/rspb.2012.2146openalex-snapshot
The probability of genetic parallelism and convergence in natural populations
inferredcites →https://doi.org/10.1098/rstb.2009.0269openalex-snapshot
The roles of time and ecology in the continental radiation of the Old World leaf warblers ( Phylloscopus and Seicercus )
inferredcites →https://doi.org/10.1098/rstb.2011.0198openalex-snapshot
Genomic islands of divergence in hybridizing Heliconius butterflies identified by large-scale targeted sequencing
inferredcites →https://doi.org/10.1098/rstb.2011.0249openalex-snapshot
Recombination rate variation and speciation: theoretical predictions and empirical results from rabbits and mice
inferredcites →https://doi.org/10.1098/rstb.2011.0260openalex-snapshot
Divergence hitchhiking and the spread of genomic isolation during ecological speciation-with-gene-flow
inferredcites →https://doi.org/10.1098/rstb.2011.0263openalex-snapshot
Genomic divergence during speciation: causes and consequences
inferredcites →https://doi.org/10.1101/gr.107524.110openalex-snapshot
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
inferredcites →https://doi.org/10.1101/gr.196485.115openalex-snapshot
Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers
inferredcites →https://doi.org/10.1101/gr.5045006openalex-snapshot
Genomic islands of differentiation between house mouse subspecies
inferredcites →https://doi.org/10.1111/j.0014-3820.2000.tb00099.xopenalex-snapshot
SONG VARIATION IN AN AVIAN RING SPECIES
inferredcites →https://doi.org/10.1111/j.1365-294x.2008.03946.xopenalex-snapshot
Divergent selection and heterogeneous genomic divergence
inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04532.xopenalex-snapshot
Genomic islands of speciation or genomic islands and speciation?
inferredcites →https://doi.org/10.1111/j.1474-919x.2001.tb04479.xopenalex-snapshot
Cryptic species in the genus Phylloscopus (Old World leaf warblers)
inferredcites →https://doi.org/10.1111/j.1558-5646.1984.tb05657.xopenalex-snapshot
ESTIMATING F -STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE
inferredcites →https://doi.org/10.1111/j.1558-5646.2009.00943.xopenalex-snapshot
THE EFFICACY OF DIVERGENCE HITCHHIKING IN GENERATING GENOMIC ISLANDS DURING ECOLOGICAL SPECIATION
inferredcites →https://doi.org/10.1111/j.1558-5646.2010.01049.xopenalex-snapshot
PARALLEL CHANGES IN HOST RESISTANCE TO VIRAL INFECTION DURING 45,000 GENERATIONS OF RELAXED SELECTION
inferredcites →https://doi.org/10.1111/mec.12600openalex-snapshot
Shared selective pressure and local genomic landscape lead to repeatable patterns of genomic divergence in sunflowers
inferredcites →https://doi.org/10.1111/mec.12796openalex-snapshot
Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
inferredcites →https://doi.org/10.1111/mec.12810openalex-snapshot
A high‐density linkage map enables a second‐generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution
inferredcites →https://doi.org/10.1111/mec.13150openalex-snapshot
Genomic analysis of a migratory divide reveals candidate genes for migration and implicates selective sweeps in generating islands of differentiation
inferredcites →https://doi.org/10.1126/science.1105201openalex-snapshot
Speciation by Distance in a Ring Species
inferredcites →https://doi.org/10.1126/science.1107239openalex-snapshot
Widespread Parallel Evolution in Sticklebacks by Repeated Fixation of Ectodysplasin Alleles
inferredcites →https://doi.org/10.1126/science.1214449openalex-snapshot
Repeatability and Contingency in the Evolution of a Key Innovation in Phage Lambda
inferredcites →https://doi.org/10.1126/science.285.5426.422openalex-snapshot
Different Trajectories of Parallel Evolution During Viral Adaptation
inferredcites →https://doi.org/10.1126/science.7809610openalex-snapshot
Experimental Tests of the Roles of Adaptation, Chance, and History in Evolution
inferredcites →https://doi.org/10.1146/annurev-ecolsys-110411-160327openalex-snapshot
The Evolutionary Genomics of Birds
inferredcites →https://doi.org/10.1186/2047-217x-1-18openalex-snapshot
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
inferredcites →https://doi.org/10.1186/2047-217x-3-26openalex-snapshot
Comparative genomic data of the Avian Phylogenomics Project
inferredcites →https://doi.org/10.1371/journal.pbio.0030285openalex-snapshot
Genomic Islands of Speciation in Anopheles gambiae
inferredcites →https://doi.org/10.1371/journal.pgen.1002891openalex-snapshot
Genome Patterns of Selection and Introgression of Haplotypes in Natural Populations of the House Mouse (Mus musculus)
inferredcites →https://doi.org/10.1371/journal.pgen.1003519openalex-snapshot
The Genomic Architecture of Population Divergence between Subspecies of the European Rabbit
inferredcites →https://doi.org/10.1371/journal.pgen.1005703openalex-snapshot
A Spatial Framework for Understanding Population Structure and Admixture
inferredcites →https://doi.org/10.1371/journal.pone.0011147openalex-snapshot
progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
inferredcites →https://doi.org/10.1371/journal.pone.0019379openalex-snapshot
A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
inferredcites →https://doi.org/10.1371/journal.pone.0052249openalex-snapshot
FastUniq: A Fast De Novo Duplicates Removal Tool for Paired Short Reads
inferredcites →https://doi.org/10.1534/genetics.111.130575openalex-snapshot
The Joint Effects of Background Selection and Genetic Recombination on Local Gene Genealogies
inferredcites →https://doi.org/10.1534/genetics.115.178558openalex-snapshot
The Effects of Background and Interference Selection on Patterns of Genetic Variation in Subdivided Populations
inferredcites →https://doi.org/10.3389/fgene.2012.00246openalex-snapshot
Replaying the Tape of Life: Quantification of the Predictability of Evolution
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