On the public citation graph

Closing coronavirus spike glycoproteins by structure-guided design

https://doi.org/10.1101/2020.06.03.129817

0 signed · 90 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/pro.3048openalex-snapshot

Crucial steps in the structure determination of a coronavirus spike glycoprotein using cryo‐electron microscopy

inferredcites →https://doi.org/10.1002/pro.3235openalex-snapshot

UCSF ChimeraX: Meeting modern challenges in visualization and analysis

inferredcites →https://doi.org/10.1016/bs.aivir.2019.08.002openalex-snapshot

Structural insights into coronavirus entry

inferredcites →https://doi.org/10.1016/j.cell.2018.12.028openalex-snapshot

Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion

inferredcites →https://doi.org/10.1016/j.cell.2019.01.046openalex-snapshot

Induction of Potent Neutralizing Antibody Responses by a Designed Protein Nanoparticle Vaccine for Respiratory Syncytial Virus

inferredcites →https://doi.org/10.1016/j.cell.2020.02.052openalex-snapshot

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor

inferredcites →https://doi.org/10.1016/j.cell.2020.02.058openalex-snapshot

Structure, Function, and Antigenicity of the SARS-CoV-2 Spike Glycoprotein

inferredcites →https://doi.org/10.1016/j.cell.2020.03.045openalex-snapshot

Structural and Functional Basis of SARS-CoV-2 Entry by Using Human ACE2

inferredcites →https://doi.org/10.1016/j.celrep.2020.107940openalex-snapshot

Remdesivir Inhibits SARS-CoV-2 in Human Lung Cells and Chimeric SARS-CoV Expressing the SARS-CoV-2 RNA Polymerase in Mice

inferredcites →https://doi.org/10.1016/j.chom.2020.06.010openalex-snapshot

Neutralization of SARS-CoV-2 by Destruction of the Prefusion Spike

inferredcites →https://doi.org/10.1016/j.chom.2020.07.002openalex-snapshot

Neutralization of SARS-CoV-2 by Destruction of the Prefusion Spike

inferredcites →https://doi.org/10.1016/j.jsb.2005.03.010openalex-snapshot

Automated molecular microscopy: The new Leginon system

inferredcites →https://doi.org/10.1016/j.jsb.2006.06.010openalex-snapshot

Visualizing density maps with UCSF Chimera

inferredcites →https://doi.org/10.1016/j.str.2018.09.006openalex-snapshot

Automatically Fixing Errors in Glycoprotein Structures with Rosetta

inferredcites →https://doi.org/10.1016/j.virusres.2014.11.021openalex-snapshot

Host cell proteases: Critical determinants of coronavirus tropism and pathogenesis

inferredcites →https://doi.org/10.1016/s0140-6736(20)30183-5openalex-snapshot

Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China

inferredcites →https://doi.org/10.1038/371037a0openalex-snapshot

Structure of influenza haemagglutinin at the pH of membrane fusion

inferredcites →https://doi.org/10.1038/cr.2016.152openalex-snapshot

Cryo-electron microscopy structures of the SARS-CoV spike glycoprotein reveal a prerequisite conformational state for receptor binding

inferredcites →https://doi.org/10.1038/nature02145openalex-snapshot

Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus

inferredcites →https://doi.org/10.1038/nature12005openalex-snapshot

Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC

inferredcites →https://doi.org/10.1038/nature12328openalex-snapshot

Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26

inferredcites →https://doi.org/10.1038/nature13808openalex-snapshot

Structure and immune recognition of trimeric pre-fusion HIV-1 Env

inferredcites →https://doi.org/10.1038/nature16988openalex-snapshot

Cryo-electron microscopy structure of a coronavirus spike glycoprotein trimer

inferredcites →https://doi.org/10.1038/nature17200openalex-snapshot

Pre-fusion structure of a human coronavirus spike protein

inferredcites →https://doi.org/10.1038/ncomms15092openalex-snapshot

Cryo-EM structures of MERS-CoV and SARS-CoV spike glycoproteins reveal the dynamic receptor binding domains

inferredcites →https://doi.org/10.1038/nmeth.2115openalex-snapshot

Prevention of overfitting in cryo-EM structure determination

inferredcites →https://doi.org/10.1038/nmeth.3286openalex-snapshot

Atomic-accuracy models from 4.5-Å cryo-electron microscopy data with density-guided iterative local refinement

inferredcites →https://doi.org/10.1038/nmeth.3541openalex-snapshot

EMRinger: side chain–directed model and map validation for 3D cryo-electron microscopy

inferredcites →https://doi.org/10.1038/nmeth.4169openalex-snapshot

cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination

inferredcites →https://doi.org/10.1038/nsmb.1456openalex-snapshot

Viral membrane fusion

inferredcites →https://doi.org/10.1038/s41564-020-0688-yopenalex-snapshot

Functional assessment of cell entry and receptor usage for SARS-CoV-2 and other lineage B betacoronaviruses

inferredcites →https://doi.org/10.1038/s41586-020-2012-7openalex-snapshot

A pneumonia outbreak associated with a new coronavirus of probable bat origin

inferredcites →https://doi.org/10.1038/s41586-020-2179-yopenalex-snapshot

Structural basis of receptor recognition by SARS-CoV-2

inferredcites →https://doi.org/10.1038/s41586-020-2180-5openalex-snapshot

Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor

inferredcites →https://doi.org/10.1038/s41586-020-2349-yopenalex-snapshot

Cross-neutralization of SARS-CoV-2 by a human monoclonal SARS-CoV antibody

inferredcites →https://doi.org/10.1038/s41592-019-0580-yopenalex-snapshot

Real-time cryo-electron microscopy data preprocessing with Warp

inferredcites →https://doi.org/10.1038/s41594-019-0233-yopenalex-snapshot

Structural basis for human coronavirus attachment to sialic acid receptors

inferredcites →https://doi.org/10.1038/s41594-019-0308-9openalex-snapshot

An antibody against the F glycoprotein inhibits Nipah and Hendra virus infections

inferredcites →https://doi.org/10.1038/s41594-019-0334-7openalex-snapshot

Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors

inferredcites →https://doi.org/10.1038/s41598-018-34171-7openalex-snapshot

Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis

inferredcites →https://doi.org/10.1038/s41598-018-36918-8openalex-snapshot

Publisher Correction: Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis

inferredcites →https://doi.org/10.1056/nejmoa030747openalex-snapshot

Identification of a Novel Coronavirus in Patients with Severe Acute Respiratory Syndrome

inferredcites →https://doi.org/10.1056/nejmoa030781openalex-snapshot

A Novel Coronavirus Associated with Severe Acute Respiratory Syndrome

inferredcites →https://doi.org/10.1056/nejmoa1211721openalex-snapshot

Isolation of a Novel Coronavirus from a Man with Pneumonia in Saudi Arabia

inferredcites →https://doi.org/10.1056/nejmoa2001017openalex-snapshot

A Novel Coronavirus from Patients with Pneumonia in China, 2019

inferredcites →https://doi.org/10.1073/pnas.0809524106openalex-snapshot

Activation of the SARS coronavirus spike protein via sequential proteolytic cleavage at two distinct sites

inferredcites →https://doi.org/10.1073/pnas.1407087111openalex-snapshot

Host cell entry of Middle East respiratory syndrome coronavirus after two-step, furin-mediated activation of the spike protein

inferredcites →https://doi.org/10.1073/pnas.1523303113openalex-snapshot

Structure and stabilization of the Hendra virus F glycoprotein in its prefusion form

inferredcites →https://doi.org/10.1073/pnas.1608147113openalex-snapshot

Proteolytic processing of Middle East respiratory syndrome coronavirus spikes expands virus tropism

inferredcites →https://doi.org/10.1073/pnas.1707304114openalex-snapshot

Immunogenicity and structures of a rationally designed prefusion MERS-CoV spike antigen

inferredcites →https://doi.org/10.1073/pnas.1708727114openalex-snapshot

Tectonic conformational changes of a coronavirus spike glycoprotein promote membrane fusion

inferredcites →https://doi.org/10.1073/pnas.1811980115openalex-snapshot

Structure-based design of a quadrivalent fusion glycoprotein vaccine for human parainfluenza virus types 1–4

inferredcites →https://doi.org/10.1080/22221751.2020.1729069openalex-snapshot

Potent binding of 2019 novel coronavirus spike protein by a SARS coronavirus-specific human monoclonal antibody

inferredcites →https://doi.org/10.1083/jcb.141.6.1335openalex-snapshot

Specific Single or Double Proline Substitutions in the “Spring-loaded” Coiled-Coil Region of the Influenza Hemagglutinin Impair or Abolish Membrane Fusion Activity

inferredcites →https://doi.org/10.1093/protein/11.4.329openalex-snapshot

Engineering trimeric fibrous proteins based on bacteriophage T4 adhesins

inferredcites →https://doi.org/10.1101/2020.03.02.972927openalex-snapshot

Viral Architecture of SARS-CoV-2 with Post-Fusion Spike Revealed by Cryo-EM

inferredcites →https://doi.org/10.1101/2020.03.15.992883openalex-snapshot

A Cryptic Site of Vulnerability on the Receptor Binding Domain of the SARS-CoV-2 Spike Glycoprotein

inferredcites →https://doi.org/10.1107/s0907444909042073openalex-snapshot

MolProbity : all-atom structure validation for macromolecular crystallography

inferredcites →https://doi.org/10.1107/s205225251801463xopenalex-snapshot

A Bayesian approach to beam-induced motion correction in cryo-EM single-particle analysis

inferredcites →https://doi.org/10.1107/s2059798319011471openalex-snapshot

Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix

inferredcites →https://doi.org/10.1126/science.1116480openalex-snapshot

Structure of SARS Coronavirus Spike Receptor-Binding Domain Complexed with Receptor

inferredcites →https://doi.org/10.1126/science.1127683openalex-snapshot

Crystal Structure of the Low-pH Form of the Vesicular Stomatitis Virus Glycoprotein G

inferredcites →https://doi.org/10.1126/science.1135710openalex-snapshot

Structure of the Prefusion Form of the Vesicular Stomatitis Virus Glycoprotein G

inferredcites →https://doi.org/10.1126/science.1243283openalex-snapshot

Structure-Based Design of a Fusion Glycoprotein Vaccine for Respiratory Syncytial Virus

inferredcites →https://doi.org/10.1126/science.1245625openalex-snapshot

Crystal Structure of a Soluble Cleaved HIV-1 Envelope Trimer

inferredcites →https://doi.org/10.1126/science.1245627openalex-snapshot

Cryo-EM Structure of a Fully Glycosylated Soluble Cleaved HIV-1 Envelope Trimer

inferredcites →https://doi.org/10.1126/science.abb2507openalex-snapshot

Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation

inferredcites →https://doi.org/10.1126/science.abb2762openalex-snapshot

Structural basis for the recognition of SARS-CoV-2 by full-length human ACE2

inferredcites →https://doi.org/10.1126/science.abb7269openalex-snapshot

A highly conserved cryptic epitope in the receptor binding domains of SARS-CoV-2 and SARS-CoV

inferredcites →https://doi.org/10.1126/science.abd4251openalex-snapshot

Distinct conformational states of SARS-CoV-2 spike protein

inferredcites →https://doi.org/10.1126/scitranslmed.abb5883openalex-snapshot

An orally bioavailable broad-spectrum antiviral inhibits SARS-CoV-2 in human airway epithelial cell cultures and multiple coronaviruses in mice

inferredcites →https://doi.org/10.1128/jvi.00079-09openalex-snapshot

Characterization of a Highly Conserved Domain within the Severe Acute Respiratory Syndrome Coronavirus Spike Protein S2 Domain with Characteristics of a Viral Fusion Peptide

inferredcites →https://doi.org/10.1128/jvi.01962-14openalex-snapshot

Characterization of pH-Sensitive Molecular Switches That Trigger the Structural Transition of Vesicular Stomatitis Virus Glycoprotein from the Postfusion State toward the Prefusion State

inferredcites →https://doi.org/10.1128/jvi.02277-14openalex-snapshot

Nipah Virus Attachment Glycoprotein Stalk C-Terminal Region Links Receptor Binding to Fusion Triggering

inferredcites →https://doi.org/10.1128/jvi.77.16.8801-8811.2003openalex-snapshot

The Coronavirus Spike Protein Is a Class I Virus Fusion Protein: Structural and Functional Characterization of the Fusion Core Complex

inferredcites →https://doi.org/10.1186/1471-2105-14-346openalex-snapshot

Disulfide by Design 2.0: a web-based tool for disulfide engineering in proteins

inferredcites →https://doi.org/10.1371/journal.ppat.1003618openalex-snapshot

A Next-Generation Cleaved, Soluble HIV-1 Env Trimer, BG505 SOSIP.664 gp140, Expresses Multiple Epitopes for Broadly Neutralizing but Not Non-Neutralizing Antibodies

inferredcites →https://doi.org/10.1371/journal.ppat.1004502openalex-snapshot

Coronavirus Cell Entry Occurs through the Endo-/Lysosomal Pathway in a Proteolysis-Dependent Manner

inferredcites →https://doi.org/10.1371/journal.ppat.1007236openalex-snapshot

Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2

inferredcites →https://doi.org/10.3390/v12050513openalex-snapshot

Protocol and Reagents for Pseudotyping Lentiviral Particles with SARS-CoV-2 Spike Protein for Neutralization Assays

inferredcites →https://doi.org/10.3390/v4040557openalex-snapshot

Ready, Set, Fuse! The Coronavirus Spike Protein and Acquisition of Fusion Competence

inferredcites →https://doi.org/10.7554/elife.17219openalex-snapshot

Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta

inferredcites →https://doi.org/10.7554/elife.42166openalex-snapshot

New tools for automated high-resolution cryo-EM structure determination in RELION-3

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.chom.2020.11.001openalex-snapshot

Real-Time Conformational Dynamics of SARS-CoV-2 Spikes on Virus Particles

inferred← citeshttps://doi.org/10.1038/s41467-020-20321-xopenalex-snapshot

Stabilizing the closed SARS-CoV-2 spike trimer

inferred← citeshttps://doi.org/10.1038/s41594-020-0478-5openalex-snapshot

A thermostable, closed SARS-CoV-2 spike protein trimer

inferred← citeshttps://doi.org/10.1101/2020.06.26.173765openalex-snapshot

Glycans on the SARS-CoV-2 Spike Control the Receptor Binding Domain Conformation

inferred← citeshttps://doi.org/10.1126/science.abb7269openalex-snapshot

A highly conserved cryptic epitope in the receptor binding domains of SARS-CoV-2 and SARS-CoV

inferred← citeshttps://doi.org/10.1371/journal.ppat.1009282openalex-snapshot

Multimerization- and glycosylation-dependent receptor binding of SARS-CoV-2 spike proteins

inferred← citeshttps://doi.org/10.3389/fimmu.2021.660198openalex-snapshot

Enhancing the Prefusion Conformational Stability of SARS-CoV-2 Spike Protein Through Structure-Guided Design

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.