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Unravelling the debate on heme effects in COVID-19 infections

https://doi.org/10.1101/2020.06.09.142125

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Epidemiologic Features and Clinical Course of Patients Infected With SARS-CoV-2 in Singapore

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Hematologic parameters in patients with COVID‐19 infection

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Regulatory FeII/III Heme: The Reconstruction of a Molecule's Biography

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Role of the Chemical Environment beyond the Coordination Site: Structural Insight into FeIII Protoporphyrin Binding to Cysteine‐Based Heme‐Regulatory Protein Motifs

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Statistical methods for research workers. By Sir Ronald A. Fisher. Edinburgh (Oliver and Boyd), 12th Ed., 1954. Pp. xv, 356; 12 Figs., 74 Tables. 16s

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Angiotensin-converting enzyme 2 (ACE2) as a SARS-CoV-2 receptor: molecular mechanisms and potential therapeutic target

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Circulating inflammatory cytokine levels in hemolytic uremic syndrome

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High-affinity binding and catalytic activity of His/Tyr-based sequences: Extending heme-regulatory motifs beyond CP

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Severe acute respiratory syndrome coronavirus protein 7a interacts with hSGT

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Structural Characterization and Crystallization of Human TMPRSS2 Protease

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SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor

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Structure, Function, and Antigenicity of the SARS-CoV-2 Spike Glycoprotein

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Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19

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Epidemiological, clinical characteristics of cases of SARS-CoV-2 infection with abnormal imaging findings

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Epidemiological and clinical features of 125 Hospitalized Patients with COVID-19 in Fuyang, Anhui, China

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Coagulation disorders in coronavirus infected patients: COVID-19, SARS-CoV-1, MERS-CoV and lessons from the past

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The pathogenesis and treatment of the `Cytokine Storm' in COVID-19

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Genotype and phenotype of COVID-19: Their roles in pathogenesis

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Heme: Modulator of Plasma Systems in Hemolytic Diseases

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Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China

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Epidemiological and clinical characteristics of 99 cases of 2019 novel coronavirus pneumonia in Wuhan, China: a descriptive study

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Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study

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Clinical course and outcomes of critically ill patients with SARS-CoV-2 pneumonia in Wuhan, China: a single-centered, retrospective, observational study

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Protein Structure and Sequence Reanalysis of 2019-nCoV Genome Refutes Snakes as Its Intermediate Host and the Unique Similarity between Its Spike Protein Insertions and HIV-1

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High expression of ACE2 receptor of 2019-nCoV on the epithelial cells of oral mucosa

inferredcites →https://doi.org/10.1038/s41467-020-15562-9openalex-snapshot

Characterization of spike glycoprotein of SARS-CoV-2 on virus entry and its immune cross-reactivity with SARS-CoV

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Complement as a target in COVID-19?

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A pneumonia outbreak associated with a new coronavirus of probable bat origin

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Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor

inferredcites →https://doi.org/10.1038/s41598-018-20841-zopenalex-snapshot

Heme interaction of the intrinsically disordered N-terminal peptide segment of human cystathionine-β-synthase

inferredcites →https://doi.org/10.1038/s41598-018-23276-8openalex-snapshot

Three-dimensional Epigenome Statistical Model: Genome-wide Chromatin Looping Prediction

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Co-protoporphyrin IX and Sn-protoporphyrin IX inactivate Zika, Chikungunya and other arboviruses by targeting the viral envelope

inferredcites →https://doi.org/10.1038/s41598-019-53231-0openalex-snapshot

Structural insights into heme binding to IL-36α proinflammatory cytokine

inferredcites →https://doi.org/10.1038/s42003-020-0800-0openalex-snapshot

Heme binding of transmembrane signaling proteins undergoing regulated intramembrane proteolysis

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Neutralization of Japanese Encephalitis Virus by heme-induced broadly reactive human monoclonal antibody

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The Regulation of Platelet Aggregation In Vitro by Interleukin-1 β and Tumor Necrosis Factor-α: Changes in Pregnancy and in Pre-eclampsia

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Clinical Characteristics of Coronavirus Disease 2019 in China

inferredcites →https://doi.org/10.1074/jbc.m111.325803openalex-snapshot

Mechanisms of Host Receptor Adaptation by Severe Acute Respiratory Syndrome Coronavirus

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Prevalence and Gene Characteristics of Antibodies with Cofactor-induced HIV-1 Specificity

inferredcites →https://doi.org/10.1080/15216540500380871openalex-snapshot

Hemoglobin and heme scavenging

inferredcites →https://doi.org/10.1089/ars.2009.2822openalex-snapshot

Heme Degradation and Vascular Injury

inferredcites →https://doi.org/10.1093/ajcp/15.11.552bopenalex-snapshot

Statistical Methods for Research Workers

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COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology

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YASARA View—molecular graphics for all devices—from smartphones to workstations

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PyBEL: a computational framework for Biological Expression Language

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Is There an Association Between COVID-19 Mortality and the Renin-Angiotensin System? A Call for Epidemiologic Investigations

inferredcites →https://doi.org/10.1093/nar/25.1.31openalex-snapshot

The SWISS-PROT protein sequence data bank and its supplement TrEMBL

inferredcites →https://doi.org/10.1093/nar/26.1.38openalex-snapshot

The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998

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The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000

inferredcites →https://doi.org/10.1093/nar/gky427openalex-snapshot

SWISS-MODEL: homology modelling of protein structures and complexes

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Analysis of ACE2 in polarized epithelial cells: surface expression and function as receptor for severe acute respiratory syndrome-associated coronavirus

inferredcites →https://doi.org/10.1101/2020.04.16.044321openalex-snapshot

Revisiting the interaction of heme with hemopexin: Recommendations for the responsible use of an emerging drug

inferredcites →https://doi.org/10.1111/jam.13038openalex-snapshot

Inactivation of Dengue and Yellow Fever viruses by heme, cobalt-protoporphyrin IX and tin-protoporphyrin IX

inferredcites →https://doi.org/10.1111/jth.14768openalex-snapshot

Abnormal coagulation parameters are associated with poor prognosis in patients with novel coronavirus pneumonia

inferredcites →https://doi.org/10.1111/vox.12925openalex-snapshot

Post‐donation COVID‐19 identification in blood donors

inferredcites →https://doi.org/10.1126/science.abb2762openalex-snapshot

Structural basis for the recognition of SARS-CoV-2 by full-length human ACE2

inferredcites →https://doi.org/10.1128/jvi.02202-13openalex-snapshot

TMPRSS2 and ADAM17 Cleave ACE2 Differentially and Only Proteolysis by TMPRSS2 Augments Entry Driven by the Severe Acute Respiratory Syndrome Coronavirus Spike Protein

inferredcites →https://doi.org/10.1152/physrev.00013.2020openalex-snapshot

Elevated Plasmin(ogen) as a Common Risk Factor for COVID-19 Susceptibility

inferredcites →https://doi.org/10.1155/2015/635670openalex-snapshot

Clinical Applications of Hemolytic Markers in the Differential Diagnosis and Management of Hemolytic Anemia

inferredcites →https://doi.org/10.1155/2020/4389089openalex-snapshot

Sars‐CoV‐2 Envelope and Membrane Proteins: Structural Differences Linked to Virus Characteristics?

inferredcites →https://doi.org/10.1186/s12859-020-3420-2openalex-snapshot

HeMoQuest: a webserver for qualitative prediction of transient heme binding to protein motifs

inferredcites →https://doi.org/10.1515/bc.2007.157openalex-snapshot

SARS-CoV accessory protein 7a directly interacts with human LFA-1

inferredcites →https://doi.org/10.1515/cclm-2020-0188openalex-snapshot

Prominent changes in blood coagulation of patients with SARS-CoV-2 infection

inferredcites →https://doi.org/10.15252/embj.20105114openalex-snapshot

SARS-CoV-2 receptor ACE2 and TMPRSS2 are primarily expressed in bronchial transient secretory cells

inferredcites →https://doi.org/10.2217/fvl-2018-0144openalex-snapshot

Membrane Binding Proteins of Coronaviruses

inferredcites →https://doi.org/10.23750/abm.v91i1.9397openalex-snapshot

WHO Declares COVID-19 a Pandemic.

inferredcites →https://doi.org/10.26434/chemrxiv.11938173openalex-snapshot

COVID-19:Attacks the 1-Beta Chain of Hemoglobin and Captures the Porphyrin to Inhibit Human Heme Metabolism

inferredcites →https://doi.org/10.26434/chemrxiv.11938173.v7openalex-snapshot

COVID-19: Attacks the 1-Beta Chain of Hemoglobin and Captures the Porphyrin to Inhibit Human Heme Metabolism

inferredcites →https://doi.org/10.3389/fbioe.2020.00074openalex-snapshot

A Computational Approach for Mapping Heme Biology in the Context of Hemolytic Disorders

inferredcites →https://doi.org/10.3389/fphar.2014.00029openalex-snapshot

Mitochondrial iron-sulfur cluster dysfunction in neurodegenerative disease

inferredcites →https://doi.org/10.3389/fphar.2014.00061openalex-snapshot

Heme in pathophysiology: a matter of scavenging, metabolism and trafficking across cell membranes

inferredcites →https://doi.org/10.3389/fphar.2014.00115openalex-snapshot

Heme on innate immunity and inflammation

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The Coronavirus E Protein: Assembly and Beyond

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An unhappy triad: Hemochromatosis, porphyria cutanea tarda and hepatocellular carcinoma-A case report

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Hepatitis A Virus-induced Severe Hemolysis Complicated by Severe Glucose-6-Phosphate Dehydrogenase Deficiency

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Investigational antiviral drugs for the treatment of COVID-19 patients

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An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients

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Transcriptomic similarities and differences in host response between SARS-CoV-2 and other viral infections

inferred← citeshttps://doi.org/10.1016/j.jbc.2023.105014openalex-snapshot

Heme binding to the SARS-CoV-2 spike glycoprotein

inferred← citeshttps://doi.org/10.1021/acs.analchem.4c01951openalex-snapshot

A Dual-Fluorescence Molecular “Open Bridge” for Evaluating Gestational Hypoxia and Hypertension under the Stress of SARS-Cov-2

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The relationship between serum erythropoietin, hepcidin, and haptoglobin levels with disease severity and other biochemical values in patients with COVID‐19

inferred← citeshttps://doi.org/10.29309/tpmj/2021.28.08.6523openalex-snapshot

Corona virus lowers hemoglobin more in severe infection than mild COVID-19 infection.

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Correlation of hemoglobin with recovery time in COVID 19 infected patients.

inferred← citeshttps://doi.org/10.3390/cells10071762openalex-snapshot

Viral MicroRNAs Encoded by Nucleocapsid Gene of SARS-CoV-2 Are Detected during Infection, and Targeting Metabolic Pathways in Host Cells

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High Doses of Dexamethasone Improved Hemoglobin Levels Lowered by Corona Virus in COVID-19 Infected Patients

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