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A genomic assessment of the marine-speciation paradox within the toothed whale superfamily Delphinoidea

https://doi.org/10.1101/2020.10.23.352286

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471250953.bi1112s47openalex-snapshot

BEDTools: The Swiss‐Army Tool for Genome Feature Analysis

inferredcites →https://doi.org/10.1002/ece3.1913openalex-snapshot

Hybridization in the Cetacea: widespread occurrence and associated morphological, behavioral, and ecological factors

inferredcites →https://doi.org/10.1007/s10682-011-9488-4openalex-snapshot

The temporal dimension of marine speciation

inferredcites →https://doi.org/10.1016/j.cell.2014.03.054openalex-snapshot

Population Genomics Reveal Recent Speciation and Rapid Evolutionary Adaptation in Polar Bears

inferredcites →https://doi.org/10.1016/j.cell.2021.07.032openalex-snapshot

Ancient and modern genomes unravel the evolutionary history of the rhinoceros family

inferredcites →https://doi.org/10.1016/j.cub.2011.05.058openalex-snapshot

Ancient Hybridization and an Irish Origin for the Modern Polar Bear Matriline

inferredcites →https://doi.org/10.1016/j.tig.2012.03.009openalex-snapshot

The genomics of speciation-with-gene-flow

inferredcites →https://doi.org/10.1016/j.tree.2017.11.003openalex-snapshot

Sympatric Speciation in the Genomic Era

inferredcites →https://doi.org/10.1016/j.ympev.2020.106756openalex-snapshot

Phylogenomics of the genus Tursiops and closely related Delphininae reveals extensive reticulation among lineages and provides inference about eco-evolutionary drivers

inferredcites →https://doi.org/10.1016/s0169-5347(01)02177-2openalex-snapshot

Theory and speciation

inferredcites →https://doi.org/10.1038/346705a0openalex-snapshot

Whale migration record

inferredcites →https://doi.org/10.1038/hdy.2014.120openalex-snapshot

Sympatric speciation in killer whales?

inferredcites →https://doi.org/10.1038/hdy.2014.67openalex-snapshot

Phylogenomics of the killer whale indicates ecotype divergence in sympatry

inferredcites →https://doi.org/10.1038/nature10231openalex-snapshot

Inference of human population history from individual whole-genome sequences

inferredcites →https://doi.org/10.1038/s41559-018-0654-8openalex-snapshot

Partial genomic survival of cave bears in living brown bears

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inferredcites →https://doi.org/10.1038/s41561-018-0222-5openalex-snapshot

A highly resolved record of relative sea level in the western Mediterranean Sea during the last interglacial period

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Hybridization between two high Arctic cetaceans confirmed by genomic analysis

inferredcites →https://doi.org/10.1086/695136openalex-snapshot

Coupling, Reinforcement, and Speciation

inferredcites →https://doi.org/10.1093/bioinformatics/18.2.337openalex-snapshot

Generating samples under a Wright–Fisher neutral model of genetic variation

inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot

Fast and accurate short read alignment with Burrows–Wheeler transform

inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot

The Sequence Alignment/Map format and SAMtools

inferredcites →https://doi.org/10.1093/bioinformatics/btq102openalex-snapshot

Genome-wide synteny through highly sensitive sequence alignment: Satsuma

inferredcites →https://doi.org/10.1093/bioinformatics/btq110openalex-snapshot

DensiTree: making sense of sets of phylogenetic trees

inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btw044openalex-snapshot

BCFtools/RoH: a hidden Markov model approach for detecting autozygosity from next-generation sequencing data

inferredcites →https://doi.org/10.1093/biolinnean/bly063openalex-snapshot

What is Speciation Genomics? The roles of ecology, gene flow, and genomic architecture in the formation of species

inferredcites →https://doi.org/10.1093/icb/icn029openalex-snapshot

Hydrodynamic flow control in marine mammals

inferredcites →https://doi.org/10.1093/molbev/msaa148openalex-snapshot

Interspecific Gene Flow and the Evolution of Specialization in Black and White Rhinoceros

inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot

PAML 4: Phylogenetic Analysis by Maximum Likelihood

inferredcites →https://doi.org/10.1093/molbev/msn172openalex-snapshot

Subdivision in an Ancestral Species Creates Asymmetry in Gene Trees

inferredcites →https://doi.org/10.1093/molbev/msr048openalex-snapshot

Testing for Ancient Admixture between Closely Related Populations

inferredcites →https://doi.org/10.1093/molbev/mss239openalex-snapshot

Phylogenetic Patterns of GC-Biased Gene Conversion in Placental Mammals and the Evolutionary Dynamics of Recombination Landscapes

inferredcites →https://doi.org/10.1093/molbev/msu269openalex-snapshot

Evaluating the Use of ABBA–BABA Statistics to Locate Introgressed Loci

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Relationships between gene trees and species trees.

inferredcites →https://doi.org/10.1093/sysbio/syp060openalex-snapshot

Radiation of Extant Cetaceans Driven by Restructuring of the Oceans

inferredcites →https://doi.org/10.1093/sysbio/syt049openalex-snapshot

The Influence of Gene Flow on Species Tree Estimation: A Simulation Study

inferredcites →https://doi.org/10.1093/sysbio/syv023openalex-snapshot

Detection and Polarization of Introgression in a Five-Taxon Phylogeny

inferredcites →https://doi.org/10.1093/sysbio/syw018openalex-snapshot

Gene Tree Discordance Causes Apparent Substitution Rate Variation

inferredcites →https://doi.org/10.1093/sysbio/syz068openalex-snapshot

Phylogenomic Resolution of the Cetacean Tree of Life Using Target Sequence Capture

inferredcites →https://doi.org/10.1098/rspb.2003.2404openalex-snapshot

Habitat preference and the marine-speciation paradox

inferredcites →https://doi.org/10.1098/rstb.1999.0371openalex-snapshot

The evolution of cost efficient swimming in marine mammals: limits to energetic optimization

inferredcites →https://doi.org/10.1098/rstb.2015.0138openalex-snapshot

Inferring species divergence times using pairwise sequential Markovian coalescent modelling and low-coverage genomic data

inferredcites →https://doi.org/10.1109/tcbb.2015.2509997openalex-snapshot

Encoding Data Using Biological Principles: The Multisample Variant Format for Phylogenomics and Population Genomics

inferredcites →https://doi.org/10.1111/1755-0998.12932openalex-snapshot

High‐quality whole‐genome sequence of an abundant Holarctic odontocete, the harbour porpoise ( Phocoena phocoena )

inferredcites →https://doi.org/10.1111/1755-0998.13265openalex-snapshot

Dsuite ‐ Fast D ‐statistics and related admixture evidence from VCF files

inferredcites →https://doi.org/10.1111/gcb.16085openalex-snapshot

Strong and lasting impacts of past global warming on baleen whales and their prey

inferredcites →https://doi.org/10.1111/mec.13557openalex-snapshot

A genomic perspective on hybridization and speciation

inferredcites →https://doi.org/10.1126/sciadv.aap9873openalex-snapshot

Whole-genome sequencing of the blue whale and other rorquals finds signatures for introgressive gene flow

inferredcites →https://doi.org/10.1126/sciadv.aay0456openalex-snapshot

Hyena paleogenomes reveal a complex evolutionary history of cross-continental gene flow between spotted and cave hyena

inferredcites →https://doi.org/10.1126/science.1188021openalex-snapshot

A Draft Sequence of the Neandertal Genome

inferredcites →https://doi.org/10.1126/science.aaw2090openalex-snapshot

Genomic architecture and introgression shape a butterfly radiation

inferredcites →https://doi.org/10.1139/z04-059openalex-snapshot

Natural hybridization between Dall's porpoises (Phocoenoides dalli) and harbour porpoises (Phocoena phocoena)

inferredcites →https://doi.org/10.1146/annurev.es.25.110194.002555openalex-snapshot

GENETIC DIVERGENCE, REPRODUCTIVE ISOLATION, AND MARINE SPECIATION

inferredcites →https://doi.org/10.1186/1471-2105-15-182openalex-snapshot

Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads

inferredcites →https://doi.org/10.1186/s12859-014-0356-4openalex-snapshot

ANGSD: Analysis of Next Generation Sequencing Data

inferredcites →https://doi.org/10.1186/s12859-017-2002-4openalex-snapshot

Gene flow analysis method, the D-statistic, is robust in a wide parameter space

inferredcites →https://doi.org/10.1186/s12859-018-2129-yopenalex-snapshot

ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees

inferredcites →https://doi.org/10.1371/journal.pone.0024980openalex-snapshot

Out of the Pacific and Back Again: Insights into the Matrilineal History of Pacific Killer Whale Ecotypes

inferredcites →https://doi.org/10.1371/journal.pone.0160080openalex-snapshot

Interspecific Hybridization in Pilot Whales and Asymmetric Genetic Introgression in Northern Globicephala melas under the Scenario of Global Warming

inferredcites →https://doi.org/10.1371/journal.pone.0201722openalex-snapshot

Hybridization in bottlenose dolphins—A case study of Tursiops aduncus × T. truncatus hybrids and successful backcross hybridization events

inferredcites →https://doi.org/10.1371/journal.pone.0215020openalex-snapshot

Hybridization in the wild between Tursiops truncatus (Montagu 1821) and Delphinus delphis (Linnaeus 1758)

inferredcites →https://doi.org/10.1371/journal.pone.0222004openalex-snapshot

Genomic analyses reveal an absence of contemporary introgressive admixture between fin whales and blue whales, despite known hybrids

inferredcites →https://doi.org/10.1578/am.31.4.2005.468openalex-snapshot

Two Presumed Interspecific Hybrids in the Genus Stenella (Delphinidae) in the Tropical West Atlantic

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Constructing sympatry networks to assess potential introgression pathways within the major oak sections in the contiguous US states

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High genomic diversity in the endangered East Greenland Svalbard Barents Sea stock of bowhead whales (Balaena mysticetus)

inferred← citeshttps://doi.org/10.1093/molbev/msad055openalex-snapshot

Tracing Eastern Wolf Origins From Whole-Genome Data in Context of Extensive Hybridization

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Divergence and hybridization in sea turtles: Inferences from genome data show evidence of ancient gene flow between species

inferred← citeshttps://doi.org/10.1146/annurev-ecolsys-012021-105003openalex-snapshot

A Genetic Perspective on Cetacean Evolution

inferred← citeshttps://doi.org/10.24072/pci.evolbiol.100139openalex-snapshot

Reticulated evolution marks the rapid diversification of the Delphinoidae

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