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Cell size is a determinant of stem cell potential during aging

https://doi.org/10.1101/2020.10.27.355388

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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The long-term repopulating subset of hematopoietic stem cells is deterministic and isolatable by phenotype

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Cell size homeostasis: Metabolic control of growth and cell division

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SLAM Family Receptors Distinguish Hematopoietic Stem and Progenitor Cells and Reveal Endothelial Niches for Stem Cells

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Hematopoietic Stem Cells Reversibly Switch from Dormancy to Self-Renewal during Homeostasis and Repair

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Monitoring Tumorigenesis and Senescence In Vivo with a p16INK4a-Luciferase Model

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Hematopoietic Stem Cells Count and Remember Self-Renewal Divisions

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mTOR Signaling in Growth, Metabolism, and Disease

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Senescence in Health and Disease

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mTORC1 Controls Phase Separation and the Biophysical Properties of the Cytoplasm by Tuning Crowding

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Excessive Cell Growth Causes Cytoplasm Dilution And Contributes to Senescence

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Stem Cell-Specific Mechanisms Ensure Genomic Fidelity within HSCs and upon Aging of HSCs

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Proliferation Drives Aging-Related Functional Decline in a Subpopulation of the Hematopoietic Stem Cell Compartment

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Heterogeneous Responses of Hematopoietic Stem Cells to Inflammatory Stimuli Are Altered with Age

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How Cells Coordinate Growth and Division

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A G1 Sizer Coordinates Growth and Division in the Mouse Epidermis

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Cellular Allometry of Mitochondrial Functionality Establishes the Optimal Cell Size

inferredcites →https://doi.org/10.1016/j.molcel.2020.03.012openalex-snapshot

Differential Scaling of Gene Expression with Cell Size May Explain Size Control in Budding Yeast

inferredcites →https://doi.org/10.1016/j.stem.2007.10.003openalex-snapshot

Hematopoietic Fingerprints: An Expression Database of Stem Cells and Their Progeny

inferredcites →https://doi.org/10.1016/j.stem.2014.10.019openalex-snapshot

Inhibition of Pluripotency Networks by the Rb Tumor Suppressor Restricts Reprogramming and Tumorigenesis

inferredcites →https://doi.org/10.1016/j.stem.2017.11.002openalex-snapshot

Dye-Independent Methods Reveal Elevated Mitochondrial Mass in Hematopoietic Stem Cells

inferredcites →https://doi.org/10.1016/j.stem.2018.04.001openalex-snapshot

Fasting Activates Fatty Acid Oxidation to Enhance Intestinal Stem Cell Function during Homeostasis and Aging

inferredcites →https://doi.org/10.1016/j.stemcr.2019.01.016openalex-snapshot

Lymphoid-Biased Hematopoietic Stem Cells Are Maintained with Age and Efficiently Generate Lymphoid Progeny

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Nucleolar Function in Lifespan Regulation

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Genetic regulation of primitive hematopoietic stem cell senescence

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Peak Annotation and Verification Engine for Untargeted LC–MS Metabolomics

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Life Span of Individual Yeast Cells

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Restoration of p53 function leads to tumour regression in vivo

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Oestrogen increases haematopoietic stem-cell self-renewal in females and during pregnancy

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Haematopoietic stem cells require a highly regulated protein synthesis rate

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mTORC1 controls the adaptive transition of quiescent stem cells from G0 to GAlert

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Replication stress is a potent driver of functional decline in ageing haematopoietic stem cells

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Exit from dormancy provokes DNA-damage-induced attrition in haematopoietic stem cells

inferredcites →https://doi.org/10.1038/nature21388openalex-snapshot

Autophagy maintains the metabolism and function of young and old stem cells

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Ascorbate regulates haematopoietic stem cell function and leukaemogenesis

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Analysis of histone 2B-GFP retention reveals slowly cycling hematopoietic stem cells

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Metabolic regulation of stem cell function in tissue homeostasis and organismal ageing

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Small nucleoli are a cellular hallmark of longevity

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Protocols to detect senescence-associated beta-galactosidase (SA-βgal) activity, a biomarker of senescent cells in culture and in vivo

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DNA damage checkpoints in stem cells, ageing and cancer

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Rb is dispensable for self-renewal and multilineage differentiation of adult hematopoietic stem cells

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mTORC1-dependent and -independent regulation of stem cell renewal, differentiation, and mobilization

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Single cell trapping and DNA damage analysis using microwell arrays

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Human bone marrow hematopoietic stem cells are increased in frequency and myeloid-biased with age

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Specific factors in blood from young but not old mice directly promote synapse formation and NMDA-receptor recruitment

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Functional heterogeneity is associated with the cell cycle status of murine hematopoietic stem cells

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Cell cycle regulation in hematopoietic stem cells

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Resonant microchannel volume and mass measurements show that suspended cells swell during mitosis

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Stem cells: Aging and transcriptional fingerprints

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Global analysis of proliferation and cell cycle gene expression in the regulation of hematopoietic stem and progenitor cell fates

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Clonal analysis reveals multiple functional defects of aged murine hematopoietic stem cells

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inferredcites →https://doi.org/10.1093/nar/gkw1214openalex-snapshot

Single cell transcriptomics reveals unanticipated features of early hematopoietic precursors

inferredcites →https://doi.org/10.1101/gad.14.8.994openalex-snapshot

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inferredcites →https://doi.org/10.1101/gad.278820.116openalex-snapshot

Aneuploidy impairs hematopoietic stem cell fitness and is selected against in regenerating tissues in vivo

inferredcites →https://doi.org/10.1101/gad.995802openalex-snapshot

Mammalian cell size is controlled by mTOR and its downstream targets S6K1 and 4EBP1/eIF4E

inferredcites →https://doi.org/10.1111/1574-6976.12060openalex-snapshot

Budding yeast as a model organism to study the effects of age

inferredcites →https://doi.org/10.1111/acel.12592openalex-snapshot

Quantitative identification of senescent cells in aging and disease

inferredcites →https://doi.org/10.1126/science.1122446openalex-snapshot

Cellular Senescence in Aging Primates

inferredcites →https://doi.org/10.1126/science.1201219openalex-snapshot

Isolation of Single Human Hematopoietic Stem Cells Capable of Long-Term Multilineage Engraftment

inferredcites →https://doi.org/10.1126/science.1245075openalex-snapshot

On being the right (cell) size

inferredcites →https://doi.org/10.1126/science.277.5330.1313openalex-snapshot

Accelerated Aging and Nucleolar Fragmentation in Yeast sgs1 Mutants

inferredcites →https://doi.org/10.1126/science.aad3267openalex-snapshot

Healthy aging: The ultimate preventative medicine

inferredcites →https://doi.org/10.1126/science.aaz6213openalex-snapshot

Cell growth dilutes the cell cycle inhibitor Rb to trigger cell division

inferredcites →https://doi.org/10.1126/scisignal.2000559openalex-snapshot

mTOR Regulation and Therapeutic Rejuvenation of Aging Hematopoietic Stem Cells

inferredcites →https://doi.org/10.1126/scitranslmed.aal3986openalex-snapshot

Transient CDK4/6 inhibition protects hematopoietic stem cells from chemotherapy-induced exhaustion

inferredcites →https://doi.org/10.1146/annurev-physiol-030212-183653openalex-snapshot

Aging, Cellular Senescence, and Cancer

inferredcites →https://doi.org/10.1182/blood-2007-02-071746openalex-snapshot

The retinoblastoma tumor suppressor is a critical intrinsic regulator for hematopoietic stem and progenitor cells under stress

inferredcites →https://doi.org/10.1182/blood-2013-07-515619openalex-snapshot

Total body irradiation causes long-term mouse BM injury via induction of HSC premature senescence in an Ink4a- and Arf-independent manner

inferredcites →https://doi.org/10.1182/blood-2015-11-683581openalex-snapshot

Palbociclib treatment of FLT3-ITD+ AML cells uncovers a kinase-dependent transcriptional regulation of FLT3 and PIM1 by CDK6

inferredcites →https://doi.org/10.1186/1471-2105-12-323openalex-snapshot

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

inferredcites →https://doi.org/10.1186/gb-2010-11-10-r106openalex-snapshot

Differential expression analysis for sequence count data

inferredcites →https://doi.org/10.1371/journal.pone.0070348openalex-snapshot

HSC-Explorer: A Curated Database for Hematopoietic Stem Cells

inferredcites →https://doi.org/10.1634/stemcells.2004-0066openalex-snapshot

Impaired Hematopoietic Stem Cell Functioning After Serial Transplantation and During Normal Aging

inferredcites →https://doi.org/10.4161/cc.7.21.6919openalex-snapshot

Growth stimulation leads to cellular senescence when the cell cycle is blocked

inferredcites →https://doi.org/10.4161/cc.8.12.8606openalex-snapshot

Rapamycin decelerates cellular senescence

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Cell size sensing in animal cells coordinates anabolic growth rates and cell cycle progression to maintain cell size uniformity

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.cell.2023.10.012openalex-snapshot

RNA polymerase II dynamics and mRNA stability feedback scale mRNA amounts with cell size

inferred← citeshttps://doi.org/10.1016/j.molcel.2022.07.017openalex-snapshot

Increasing cell size remodels the proteome and promotes senescence

inferred← citeshttps://doi.org/10.1016/j.molcel.2023.10.016openalex-snapshot

CDK4/6 inhibitor-mediated cell overgrowth triggers osmotic and replication stress to promote senescence

inferred← citeshttps://doi.org/10.1038/s41523-024-00624-8openalex-snapshot

The search for CDK4/6 inhibitor biomarkers has been hampered by inappropriate proliferation assays

inferred← citeshttps://doi.org/10.1038/s41594-024-01353-zopenalex-snapshot

Genome dilution by cell growth drives starvation-like proteome remodeling in mammalian and yeast cells

inferred← citeshttps://doi.org/10.1083/jcb.202012031openalex-snapshot

Angelika Amon (1967–2020): Breakthrough scientist, extraordinary mentor, and loyal friend

inferred← citeshttps://doi.org/10.1091/mbc.e24-11-0488openalex-snapshot

Intracellular diffusion in the cytoplasm increases with cell size in fission yeast

inferred← citeshttps://doi.org/10.11606/d.9.2022.tde-15022023-132009openalex-snapshot

Avaliação dos efeitos modulatórios da hematopoese no envelhecimento: Papel das células tronco mesenquimais medulares

inferred← citeshttps://doi.org/10.1182/blood.2021014698openalex-snapshot

PLAG1 dampens protein synthesis to promote human hematopoietic stem cell self-renewal

inferred← citeshttps://doi.org/10.1186/s12915-022-01372-6openalex-snapshot

Segmentation, tracking and cell cycle analysis of live-cell imaging data with Cell-ACDC

inferred← citeshttps://doi.org/10.1214/25-aoas2012openalex-snapshot

Augmented doubly robust post-imputation inference for proteomic data

inferred← citeshttps://doi.org/10.3791/64792-vopenalex-snapshot

Isolation of Nuclei from Flash-frozen Liver Tissue for Single-cell Multiomics

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