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Intronic non-coding RNAs within ribosomal protein coding genes can regulate biogenesis of yeast ribosome

https://doi.org/10.1101/289751
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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.cell.2011.08.044openalex-snapshot
Introns within Ribosomal Protein Genes Regulate the Production and Function of Yeast Ribosomes
inferredcites →https://doi.org/10.1016/j.cub.2014.04.048openalex-snapshot
Transcriptional Regulation by Pho23 Modulates the Frequency of Autophagosome Formation
inferredcites →https://doi.org/10.1016/j.ygeno.2007.07.003openalex-snapshot
Transcriptional regulation in eukaryotic ribosomal protein genes
inferredcites →https://doi.org/10.1038/nature13007openalex-snapshot
Poly(A)-tail profiling reveals an embryonic switch in translational control
inferredcites →https://doi.org/10.1038/nsmb.1514openalex-snapshot
Single-RNA counting reveals alternative modes of gene expression in yeast
inferredcites →https://doi.org/10.1038/nsmb.2480openalex-snapshot
Structure and function of long noncoding RNAs in epigenetic regulation
inferredcites →https://doi.org/10.1039/c2mb25046bopenalex-snapshot
A simple method for incorporating dynamic effects of intronic miRNA mediated regulation
inferredcites →https://doi.org/10.1039/c3fd00126aopenalex-snapshot
RiboVision suite for visualization and analysis of ribosomes
inferredcites →https://doi.org/10.1073/pnas.93.4.1596openalex-snapshot
An RNA structure involved in feedback regulation of splicing and of translation is critical for biological fitness.
inferredcites →https://doi.org/10.1093/gbe/evu196openalex-snapshot
Intron Evolution in Saccharomycetaceae
inferredcites →https://doi.org/10.1093/hmg/ddl046openalex-snapshot
Non-coding RNA
inferredcites →https://doi.org/10.1093/nar/gkr1029openalex-snapshot
Saccharomyces Genome Database: the genomics resource of budding yeast
inferredcites →https://doi.org/10.1093/nar/gkr853openalex-snapshot
PomBase: a comprehensive online resource for fission yeast
inferredcites →https://doi.org/10.1101/gad.1800909openalex-snapshot
Long noncoding RNAs: functional surprises from the RNA world
inferredcites →https://doi.org/10.1101/gr.229202openalex-snapshot
BLAT —The BLAST -Like Alignment Tool
inferredcites →https://doi.org/10.1126/science.1179555openalex-snapshot
CRISPR/Cas, the Immune System of Bacteria and Archaea
inferredcites →https://doi.org/10.1126/stke.3672007re1openalex-snapshot
How Do MicroRNAs Regulate Gene Expression?
inferredcites →https://doi.org/10.1128/mcb.00025-13openalex-snapshot
The Yeast Snt2 Protein Coordinates the Transcriptional Response to Hydrogen Peroxide-Mediated Oxidative Stress
inferredcites →https://doi.org/10.1128/mcb.02062-06openalex-snapshot
Potential Interface between Ribosomal Protein Production and Pre-rRNA Processing
inferredcites →https://doi.org/10.1128/mcb.02367-05openalex-snapshot
Fine-Structure Analysis of Ribosomal Protein Gene Transcription
inferredcites →https://doi.org/10.1128/mcb.19.1.826openalex-snapshot
Ribosomal Protein S14 of Saccharomyces cerevisiae Regulates Its Expression by Binding to RPS14B Pre-mRNA and to 18S rRNA
inferredcites →https://doi.org/10.1146/annurev.cellbio.24.110707.175327openalex-snapshot
The Biogenesis and Function of PIWI Proteins and piRNAs: Progress and Prospect
inferredcites →https://doi.org/10.1146/annurev.genet.33.1.261openalex-snapshot
Ribosome Synthesis in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1146/annurev.micro.55.1.165openalex-snapshot
Quorum Sensing in Bacteria
inferredcites →https://doi.org/10.1186/1471-2105-11-485openalex-snapshot
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
inferredcites →https://doi.org/10.1186/gb-2003-5-1-r1openalex-snapshot
MicroRNA targets in Drosophila
inferredcites →https://doi.org/10.1186/gb-2007-8-10-r223openalex-snapshot
Comparative genomic analysis of fungal genomes reveals intron-rich ancestors
inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
inferredcites →https://doi.org/10.1261/rna.049098.114openalex-snapshot
A deeply conserved, noncanonical miRNA hosted by ribosomal DNA
inferredcites →https://doi.org/10.1261/rna.5248604openalex-snapshot
Fast and effective prediction of microRNA/target duplexes
inferredcites →https://doi.org/10.1371/journal.pbio.1000523openalex-snapshot
Control of Transcription by Cell Size
inferredcites →https://doi.org/10.1371/journal.pgen.1004734openalex-snapshot
Metabolic Respiration Induces AMPK- and Ire1p-Dependent Activation of the p38-Type HOG MAPK Pathway
inferredcites →https://doi.org/10.1534/genetics.110.116665openalex-snapshot
Stb3 Plays a Role in the Glucose-Induced Transition from Quiescence to Growth in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1534/genetics.113.153197openalex-snapshot
Ribosome Biogenesis in the Yeast Saccharomyces cerevisiae
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