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The Yeast Snt2 Protein Coordinates the Transcriptional Response to Hydrogen Peroxide-Mediated Oxidative Stress

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/(sici)1097-0061(19960315)12:3%3c267::aid-yea897%3e3.0.co;2-uopenalex-snapshot
Identification of ASK10 as a multicopy activator of Skn7p-dependent transcription of a HIS3 reporter gene.
inferredcites →https://doi.org/10.1002/(sici)1097-0061(19960315)12:3<267::aid-yea897>3.0.co;2-uopenalex-snapshot
Identification of ASK10 as a multicopy activator of Skn7p-dependent transcription of a HIS3 reporter gene
inferredcites →https://doi.org/10.1002/(sici)1097-0061(199807)14:10<953::aid-yea293>3.0.co;2-uopenalex-snapshot
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1002/0471142727.mb1312s23openalex-snapshot
Preparation of Yeast RNA
inferredcites →https://doi.org/10.1002/0471142727.mb1910s89openalex-snapshot
Galaxy: A Web‐Based Genome Analysis Tool for Experimentalists
inferredcites →https://doi.org/10.1002/0471142727.mb2103s69openalex-snapshot
Chromatin Immunoprecipitation for Determining the Association of Proteins with Specific Genomic Sequences In Vivo
inferredcites →https://doi.org/10.1002/cfg.85openalex-snapshot
A genomic approach for the identification and classification of genes involved in cell wall formation and its regulation in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1002/yea.1188openalex-snapshot
YAP4 gene expression is induced in response to several forms of stress in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1007/bf00351681openalex-snapshot
The PAR1 (YAP1/SNQ3) gene of Saccharomyces cerevisiae, ac-jun homologue, is involved in oxygen metabolism
inferredcites →https://doi.org/10.1016/j.bbagen.2007.12.004openalex-snapshot
Redox control and oxidative stress in yeast cells
inferredcites →https://doi.org/10.1016/j.cell.2005.10.023openalex-snapshot
Histone H3 Methylation by Set2 Directs Deacetylation of Coding Regions by Rpd3S to Suppress Spurious Intragenic Transcription
inferredcites →https://doi.org/10.1016/j.cell.2005.10.025openalex-snapshot
Cotranscriptional Set2 Methylation of Histone H3 Lysine 36 Recruits a Repressive Rpd3 Complex
inferredcites →https://doi.org/10.1016/j.molcel.2006.09.008openalex-snapshot
Histone H2B Deacetylation at Lysine 11 Is Required for Yeast Apoptosis Induced by Phosphorylation of H2B at Serine 10
inferredcites →https://doi.org/10.1016/j.molcel.2008.11.020openalex-snapshot
A Library of Yeast Transcription Factor Motifs Reveals a Widespread Function for Rsc3 in Targeting Nucleosome Exclusion at Promoters
inferredcites →https://doi.org/10.1016/j.molcel.2011.07.027openalex-snapshot
Life Span Extension and H2O2 Resistance Elicited by Caloric Restriction Require the Peroxiredoxin Tsa1 in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1016/s0014-5793(98)00061-1openalex-snapshot
Cytochrome c in the apoptotic and antioxidant cascades
inferredcites →https://doi.org/10.1016/s0168-9525(99)01936-8openalex-snapshot
RAP, RAP, open up! New wrinkles for RAP1 in yeast
inferredcites →https://doi.org/10.1038/415141aopenalex-snapshot
Functional organization of the yeast proteome by systematic analysis of protein complexes
inferredcites →https://doi.org/10.1038/msb.2010.112openalex-snapshot
Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast
inferredcites →https://doi.org/10.1038/nature02046openalex-snapshot
Global analysis of protein expression in yeast
inferredcites →https://doi.org/10.1038/nature02258openalex-snapshot
The MAPK Hog1 recruits Rpd3 histone deacetylase to activate osmoresponsive genes
inferredcites →https://doi.org/10.1038/nature02800openalex-snapshot
Transcriptional regulatory code of a eukaryotic genome
inferredcites →https://doi.org/10.1038/nature05649openalex-snapshot
Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map
inferredcites →https://doi.org/10.1038/nbt.1621openalex-snapshot
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
inferredcites →https://doi.org/10.1038/nbt.1754openalex-snapshot
Integrative genomics viewer
inferredcites →https://doi.org/10.1038/ng569openalex-snapshot
Promoter-specific binding of Rap1 revealed by genome-wide maps of protein–DNA association
inferredcites →https://doi.org/10.1038/nmeth1101openalex-snapshot
Comprehensive analysis of diverse ribonucleoprotein complexes
inferredcites →https://doi.org/10.1038/nrg3055openalex-snapshot
Controlling gene expression in response to stress
inferredcites →https://doi.org/10.1046/j.1365-2958.2002.03262.xopenalex-snapshot
The yeast zinc finger regulators Pdr1p and Pdr3p control pleiotropic drug resistance (PDR) as homo‐ and heterodimers in vivo
inferredcites →https://doi.org/10.1073/pnas.93.25.14503openalex-snapshot
HDA1 and RPD3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription
inferredcites →https://doi.org/10.1074/jbc.m109.058610openalex-snapshot
SAGA and Rpd3 Chromatin Modification Complexes Dynamically Regulate Heat Shock Gene Structure and Expression
inferredcites →https://doi.org/10.1074/jbc.m411062200openalex-snapshot
Pkc1 and the Upstream Elements of the Cell Integrity Pathway in Saccharomyces cerevisiae, Rom2 and Mtl1, Are Required for Cellular Responses to Oxidative Stress
inferredcites →https://doi.org/10.1083/jcb.131.5.1133openalex-snapshot
Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.
inferredcites →https://doi.org/10.1083/jcb.201301120openalex-snapshot
A novel single-cell screening platform reveals proteome plasticity during yeast stress responses
inferredcites →https://doi.org/10.1091/mbc.11.12.4241openalex-snapshot
Genomic Expression Programs in the Response of Yeast Cells to Environmental Changes
inferredcites →https://doi.org/10.1091/mbc.11.7.2335openalex-snapshot
The Skn7 Response Regulator of Saccharomyces cerevisiae Interacts with Hsf1 In Vivo and Is Required for the Induction of Heat Shock Genes by Oxidative Stress
inferredcites →https://doi.org/10.1091/mbc.12.2.323openalex-snapshot
Remodeling of Yeast Genome Expression in Response to Environmental Changes
inferredcites →https://doi.org/10.1093/bioinformatics/bth092openalex-snapshot
TANDEM: matching proteins with tandem mass spectra
inferredcites →https://doi.org/10.1093/bioinformatics/btp120openalex-snapshot
TopHat: discovering splice junctions with RNA-Seq
inferredcites →https://doi.org/10.1093/bioinformatics/btp498openalex-snapshot
Next generation software for functional trend analysis
inferredcites →https://doi.org/10.1093/bioinformatics/btq033openalex-snapshot
BEDTools: a flexible suite of utilities for comparing genomic features
inferredcites →https://doi.org/10.1093/emboj/16.7.1710openalex-snapshot
Regulation of yAP‐1 nuclear localization in response to oxidative stress
inferredcites →https://doi.org/10.1093/genetics/147.2.435openalex-snapshot
Large Scale Identification of Genes Involved in Cell Surface Biosynthesis and Architecture in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1093/nar/gkp335openalex-snapshot
MEME SUITE: tools for motif discovery and searching
inferredcites →https://doi.org/10.1093/nar/gkq964openalex-snapshot
YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface
inferredcites →https://doi.org/10.1099/13500872-145-1-231openalex-snapshot
Stress induction of HSP30, the plasma membrane heat shock protein gene of Saccharomyces cerevisiae, appears not to use known stress-regulated transcription factors
inferredcites →https://doi.org/10.1101/gr.4086505openalex-snapshot
Galaxy: A platform for interactive large-scale genome analysis
inferredcites →https://doi.org/10.1101/pdb.prot5610openalex-snapshot
Conjugation of Magnetic Beads for Immunopurification of Protein Complexes
inferredcites →https://doi.org/10.1101/pdb.prot5611openalex-snapshot
Affinity Purification of Protein Complexes
inferredcites →https://doi.org/10.1111/j.1365-2958.2010.07167.xopenalex-snapshot
The Rpd3L HDAC complex is essential for the heat stress response in yeast
inferredcites →https://doi.org/10.1111/j.1574-6976.2000.tb00551.xopenalex-snapshot
Stress-controlled transcription factors, stress-induced genes and stress tolerance in budding yeast
inferredcites →https://doi.org/10.1128/ec.2.5.962-970.2003openalex-snapshot
Ask10p Mediates the Oxidative Stress-Induced Destruction of the Saccharomyces cerevisiae C-Type Cyclin Ume3p/Srb11p
inferredcites →https://doi.org/10.1128/mcb.00887-07openalex-snapshot
Heme Levels Switch the Function of Hap1 of Saccharomyces cerevisiae between Transcriptional Activator and Transcriptional Repressor
inferredcites →https://doi.org/10.1128/mcb.01643-08openalex-snapshot
The H3K4 Demethylase Lid Associates with and Inhibits Histone Deacetylase Rpd3
inferredcites →https://doi.org/10.1128/mcb.02297-06openalex-snapshot
Direct Role for the Rpd3 Complex in Transcriptional Induction of the Anaerobic DAN/TIR Genes in Yeast
inferredcites →https://doi.org/10.1128/mmbr.66.4.579-591.2002openalex-snapshot
Elucidating TOR Signaling and Rapamycin Action: Lessons from Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1186/gb-2008-9-11-r167openalex-snapshot
Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment
inferredcites →https://doi.org/10.1186/gb-2008-9-9-r137openalex-snapshot
Model-based Analysis of ChIP-Seq (MACS)
inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
inferredcites →https://doi.org/10.1186/gb-2009-10-5-r57openalex-snapshot
The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress
inferredcites →https://doi.org/10.1186/gb-2010-11-8-r86openalex-snapshot
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
inferredcites →https://doi.org/10.1371/journal.pbio.1001369openalex-snapshot
Systematic Dissection of Roles for Chromatin Regulators in a Yeast Stress Response
inferredcites →https://doi.org/10.1371/journal.pone.0005029openalex-snapshot
Where Does Mediator Bind In Vivo?
inferredcites →https://doi.org/10.1371/journal.pone.0036295openalex-snapshot
Novel E3 Ubiquitin Ligases That Regulate Histone Protein Levels in the Budding Yeast Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1534/genetics.111.128033openalex-snapshot
The Response to Heat Shock and Oxidative Stress in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.4161/cib.3.4.11908openalex-snapshot
The homeodomain transcription factor Ste12

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Genome-wide identification and expression profiling of the histone deacetylase gene family in Fusarium oxysporum
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HSF1 induces RNA polymerase II synthesis of ribosomal RNA in S. cerevisiae during nitrogen deprivation
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The role of frataxin in fission yeast iron metabolism: Implications for Friedreich's ataxia
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On top of biosynthetic gene clusters: How epigenetic machinery influences secondary metabolism in fungi
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The epigenetic reader SntB regulates secondary metabolism, development and global histone modifications in Aspergillus flavus
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The KdmB-EcoA-RpdA-SntB (KERS) chromatin regulatory complex controls development, secondary metabolism and pathogenicity in Aspergillus flavus
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The histone demethylase KdmB is part of a trimeric protein complex and mediates virulence and mycotoxin production in Penicillium expansum
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Global Promoter Targeting of a Conserved Lysine Deacetylase for Transcriptional Shutoff during Quiescence Entry
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Slow-growing cells within isogenic populations have increased RNA polymerase error rates and DNA damage
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Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL
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Dynamics of DNA damage-induced nuclear inclusions are regulated by SUMOylation of Btn2
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PKA plays a conserved role in regulating gene expression and metabolic adaptation by phosphorylating Rpd3/HDAC1
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Multivalent binding of the tardigrade Dsup protein to chromatin promotes yeast survival and longevity upon exposure to oxidative damage
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Archetypal transcriptional blocks underpin yeast gene regulation in response to changes in growth conditions
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2-Hydroxyisobutyrylation on histone H4K8 is regulated by glucose homeostasis in Saccharomyces cerevisiae
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Set4 is a chromatin-associated protein, promotes survival during oxidative stress, and regulates stress response genes in yeast
inferred← citeshttps://doi.org/10.1080/15548627.2018.1458171openalex-snapshot
MoSnt2-dependent deacetylation of histone H3 mediates MoTor-dependent autophagy and plant infection by the rice blast fungus Magnaporthe oryzae
inferred← citeshttps://doi.org/10.1093/femsle/fnac077openalex-snapshot
SLX5 deletion confers tolerance to oxidative stress in Saccharomyces cerevisiae
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Transcriptional memory dampens heat shock responses in yeast: functional role of Mip6 and its interaction with Rpd3
inferred← citeshttps://doi.org/10.1093/nar/gkac744openalex-snapshot
The KdmB-EcoA-RpdA-SntB chromatin complex binds regulatory genes and coordinates fungal development with mycotoxin synthesis
inferred← citeshttps://doi.org/10.1101/2021.05.14.444270openalex-snapshot
Histone acetyltransferases and deacetylases are required for virulence, conidiation, DNA damage repair, and multiple stresses resistance of Alternaria alternata
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Decoding Transcriptional Memory in Yeast Heat Shock and the Functional Implication of the RNA Binding Protein Mip6
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Intronic non-coding RNAs within ribosomal protein coding genes can regulate biogenesis of yeast ribosome
inferred← citeshttps://doi.org/10.1101/330365openalex-snapshot
Gene function contributes to gene expression levels in S. cerevisiae
inferred← citeshttps://doi.org/10.1111/mmi.13491openalex-snapshot
Transcription factor PRO1 targets genes encoding conserved components of fungal developmental signaling pathways
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The TORC1 activates Rpd3L complex to deacetylate Ino80 and H2A.Z and repress autophagy
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Responses of Yeast Biocontrol Agents to Environmental Stress
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Revitalization of a Forward Genetic Screen Identifies Three New Regulators of Fungal Secondary Metabolism in the Genus Aspergillus
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Stress-Free with Rpd3: a Unique Chromatin Complex Mediates the Response to Oxidative Stress
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Environmental change drives accelerated adaptation through stimulated copy number variation
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Bypassing the Requirement for an Essential MYST Acetyltransferase
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The Pho23-Rpd3 histone deacetylase complex regulates the yeast metabolic transcription factor Stb5
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Characterization of selection on immune regulatory elements and major histocompatibility complex gene diversity in Holstein cattle
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RcLS2F – A Novel Fungal Class 1 KDAC Co-repressor Complex in Aspergillus nidulans
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New Insight Into Pathogenicity and Secondary Metabolism of the Plant Pathogen Penicillium expansum Through Deletion of the Epigenetic Reader SntB
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Histone Acetyltransferases and Deacetylases Are Required for Virulence, Conidiation, DNA Damage Repair, and Multiple Stresses Resistance of Alternaria alternata
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Fungal Lysine Deacetylases in Virulence, Resistance, and Production of Small Bioactive Compounds
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The Subunit Nto1 of the NuA3 Complex Is Associated with Conidiation, Oxidative Stress Response, and Pathogenicity in Fusarium oxysporum
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Protein Homeostasis Networks and the Use of Yeast to Guide Interventions in Alzheimer’s Disease
inferred← citeshttps://doi.org/10.3390/jof10060368openalex-snapshot
SntB Affects Growth to Regulate Infecting Potential in Penicillium italicum
inferred← citeshttps://doi.org/10.3390/jof8090974openalex-snapshot
The CfSnt2-Dependent Deacetylation of Histone H3 Mediates Autophagy and Pathogenicity of Colletotrichum fructicola
inferred← citeshttps://doi.org/10.7554/elife.94743openalex-snapshot
SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
inferred← citeshttps://doi.org/10.7554/elife.94743.1openalex-snapshot
SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
inferred← citeshttps://doi.org/10.7554/elife.94743.2openalex-snapshot
SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
inferred← citeshttps://doi.org/10.7554/elife.94743.2.sa0openalex-snapshot
Reviewer #2 (Public Review): SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
inferred← citeshttps://doi.org/10.7554/elife.94743.2.sa2openalex-snapshot
eLife Assessment: SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
inferred← citeshttps://doi.org/10.7554/elife.94743.2.sa3openalex-snapshot
Author response: SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
inferred← citeshttps://doi.org/10.7554/elife.94743.3openalex-snapshot
SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
inferred← citeshttps://doi.org/10.7554/elife.94743.4openalex-snapshot
SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
inferred← citeshttps://doi.org/10.7554/elife.94743.5openalex-snapshot
SntB triggers the antioxidant pathways to regulate development and aflatoxin biosynthesis in Aspergillus flavus
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