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Hybrid Automata Library: A modular platform for efficient hybrid modeling with real-time visualization

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/cpa.3160050303openalex-snapshot
On the solution of nonlinear hyperbolic differential equations by finite differences
inferredcites →https://doi.org/10.1002/wsbm.102openalex-snapshot
Hybrid models of tumor growth
inferredcites →https://doi.org/10.1006/bulm.1998.0042openalex-snapshot
Continuous and Discrete Mathematical Models of Tumor-induced Angiogenesis
inferredcites →https://doi.org/10.1007/7651_2016_346openalex-snapshot
Agent-Based Modeling of Cancer Stem Cell Driven Solid Tumor Growth
inferredcites →https://doi.org/10.1007/978-3-7643-8123-3openalex-snapshot
Single-Cell-Based Models in Biology and Medicine
inferredcites →https://doi.org/10.1007/s11538-009-9498-3openalex-snapshot
Generalized Voronoi Tessellation as a Model of Two-dimensional Cell Tissue Dynamics
inferredcites →https://doi.org/10.1007/s11538-018-0402-xopenalex-snapshot
Micropharmacology: An In Silico Approach for Assessing Drug Efficacy Within a Tumor Tissue
inferredcites →https://doi.org/10.1016/b978-0-12-388403-9.00013-8openalex-snapshot
Multi-Scale Modeling of Tissues Using CompuCell3D
inferredcites →https://doi.org/10.1016/j.cell.2006.09.042openalex-snapshot
Tumor Morphology and Phenotypic Evolution Driven by Selective Pressure from the Microenvironment
inferredcites →https://doi.org/10.1016/j.jtbi.2007.01.027openalex-snapshot
An evolutionary hybrid cellular automaton model of solid tumour growth
inferredcites →https://doi.org/10.1016/j.jtbi.2013.04.037openalex-snapshot
A review of mathematical models for the formation of vascular networks
inferredcites →https://doi.org/10.1038/s41467-017-01968-5openalex-snapshot
Integrating evolutionary dynamics into treatment of metastatic castrate-resistant prostate cancer
inferredcites →https://doi.org/10.1098/rsif.2017.0490openalex-snapshot
The biology and mathematical modelling of glioma invasion: a review
inferredcites →https://doi.org/10.1101/cshperspect.a028332openalex-snapshot
Homeostasis Back and Forth: An Ecoevolutionary Perspective of Cancer
inferredcites →https://doi.org/10.1137/0103003openalex-snapshot
The Numerical Solution of Parabolic and Elliptic Differential Equations
inferredcites →https://doi.org/10.1158/0008-5472.can-08-3957openalex-snapshot
The Role of Transforming Growth Factor-β–Mediated Tumor-Stroma Interactions in Prostate Cancer Progression: An Integrative Approach
inferredcites →https://doi.org/10.1158/0008-5472.can-13-1720openalex-snapshot
Senescent Fibroblasts in Melanoma Initiation and Progression: An Integrated Theoretical, Experimental, and Clinical Approach
inferredcites →https://doi.org/10.1158/0008-5472.can-13-2652openalex-snapshot
An Integrated Computational Model of the Bone Microenvironment in Bone-Metastatic Prostate Cancer
inferredcites →https://doi.org/10.1158/0008-5472.can-14-1428openalex-snapshot
Impact of Metabolic Heterogeneity on Tumor Growth, Invasion, and Treatment Outcomes
inferredcites →https://doi.org/10.1371/journal.pcbi.1002970openalex-snapshot
Chaste: An Open Source C++ Library for Computational Physiology and Biology
inferredcites →https://doi.org/10.1371/journal.pcbi.1005991openalex-snapshot
PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems
inferredcites →https://doi.org/10.1534/genetics.116.193474openalex-snapshot
Stochasticity in the Genotype-Phenotype Map: Implications for the Robustness and Persistence of Bet-Hedging

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s11538-020-00768-1openalex-snapshot
High School Internship Program in Integrated Mathematical Oncology (HIP IMO): Five-Year Experience at Moffitt Cancer Center
inferred← citeshttps://doi.org/10.1016/j.coisb.2019.09.005openalex-snapshot
Modeling heterogeneous tumor growth dynamics and cell–cell interactions at single-cell and cell-population resolution
inferred← citeshttps://doi.org/10.1016/j.cpc.2019.05.005openalex-snapshot
LibreGrowth: A tumor growth code based on reaction–diffusion equations using shared memory
inferred← citeshttps://doi.org/10.1038/s41598-019-39636-xopenalex-snapshot
The impact of proliferation-migration tradeoffs on phenotypic evolution in cancer
inferred← citeshttps://doi.org/10.1101/454447openalex-snapshot
Evolutionary exploitation of PD-L1 expression in hormone receptor positive breast cancer
inferred← citeshttps://doi.org/10.1101/542019openalex-snapshot
Tissue structure accelerates evolution: premalignant sweeps precede neutral expansion
inferred← citeshttps://doi.org/10.1101/548131openalex-snapshot
Clonal Architecture of the Epidermis: Homeostasis Limits Keratinocyte Evolution
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1007961openalex-snapshot
Mathematical modelling reveals cellular dynamics within tumour spheroids
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