On the public citation graph
Enhanced plasticity of programmed DNA elimination boosts adaptive potential in suboptimal environments
0 signed · 78 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/bies.10153openalex-snapshot
Non‐stop decay—a new mRNA surveillance pathway
inferredcites →https://doi.org/10.1002/dvg.1020010105openalex-snapshot
A genetic system for alternative stable characteristics in genomically identical homozygous clones
inferredcites →https://doi.org/10.1002/wrna.1124openalex-snapshot
Degradation of mRNAs that lack a stop codon: a decade of nonstop progress
inferredcites →https://doi.org/10.1002/wrna.1293openalex-snapshot
On the path to genetic novelties: insights from programmed DNA elimination and RNA splicing
inferredcites →https://doi.org/10.1007/bf01984742openalex-snapshot
Inherited changes produced by heat-treatment in Drosophila melanogaster
inferredcites →https://doi.org/10.1016/0022-2836(92)90393-xopenalex-snapshot
A high degree of macronuclear chromosome polymorphism is generated by variable DNA rearrangements in Paramecium primaurelia during macronuclear differentiation
inferredcites →https://doi.org/10.1016/j.cell.2013.06.052openalex-snapshot
Orchestrated Intron Retention Regulates Normal Granulocyte Differentiation
inferredcites →https://doi.org/10.1016/j.cell.2018.02.029openalex-snapshot
Dicer-like Enzymes with Sequence Cleavage Preferences
inferredcites →https://doi.org/10.1016/j.cub.2018.03.067openalex-snapshot
Discovery of the First Germline-Restricted Gene by Subtractive Transcriptomic Analysis in the Zebra Finch, Taeniopygia guttata
inferredcites →https://doi.org/10.1016/j.cub.2018.04.071openalex-snapshot
Small RNA-Mediated trans-Nuclear and trans-Element Communications in Tetrahymena DNA Elimination
inferredcites →https://doi.org/10.1016/j.devcel.2013.12.010openalex-snapshot
Functional Diversification of Dicer-like Proteins and Small RNAs Required for Genome Sculpting
inferredcites →https://doi.org/10.1016/j.ejop.2010.12.001openalex-snapshot
Thermal performance curves of Paramecium caudatum: A model selection approach
inferredcites →https://doi.org/10.1016/j.gde.2014.03.012openalex-snapshot
Programmed DNA elimination in multicellular organisms
inferredcites →https://doi.org/10.1016/j.tig.2009.05.007openalex-snapshot
Developmental genome rearrangements in ciliates: a natural genomic subtraction mediated by non-coding transcripts
inferredcites →https://doi.org/10.1016/j.tig.2017.01.005openalex-snapshot
Necessity Is the Mother of Invention: Ciliates, Transposons, and Transgenerational Inheritance
inferredcites →https://doi.org/10.1016/s0065-2660(08)60488-5openalex-snapshot
Recent Advances in the Genetics of Paramecium and Euplotes
inferredcites →https://doi.org/10.1038/24550openalex-snapshot
Hsp90 as a capacitor for morphological evolution
inferredcites →https://doi.org/10.1038/nature08739openalex-snapshot
Hsp90 prevents phenotypic variation by suppressing the mutagenic activity of transposons
inferredcites →https://doi.org/10.1038/nature13318openalex-snapshot
Genome-defence small RNAs exapted for epigenetic mating-type inheritance
inferredcites →https://doi.org/10.1038/nature749openalex-snapshot
Hsp90 as a capacitor of phenotypic variation
inferredcites →https://doi.org/10.1038/ng.743openalex-snapshot
Drosophila Piwi functions in Hsp90-mediated suppression of phenotypic variation
inferredcites →https://doi.org/10.1038/ng1067openalex-snapshot
Evidence for an epigenetic mechanism by which Hsp90 acts as a capacitor for morphological evolution
inferredcites →https://doi.org/10.1038/nprot.2013.092openalex-snapshot
Large-scale gene function analysis with the PANTHER classification system
inferredcites →https://doi.org/10.1038/nsmb.1550openalex-snapshot
Nonsense-mediated mRNA decay (NMD) mechanisms
inferredcites →https://doi.org/10.1038/s41588-017-0036-1openalex-snapshot
The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution
inferredcites →https://doi.org/10.1073/pnas.0136770100openalex-snapshot
Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans
inferredcites →https://doi.org/10.1073/pnas.0501844102openalex-snapshot
Developmental plasticity and the origin of species differences
inferredcites →https://doi.org/10.1073/pnas.1803361115openalex-snapshot
Genetics of alternative splicing evolution during sunflower domestication
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btv691openalex-snapshot
ParTIES: a toolbox for Paramecium interspersed DNA elimination studies
inferredcites →https://doi.org/10.1093/emph/eoy007openalex-snapshot
Developmental plasticity research in evolution and human health
inferredcites →https://doi.org/10.1093/gbe/evt087openalex-snapshot
Spliced DNA Sequences in the Paramecium Germline: Their Properties and Evolutionary Potential
inferredcites →https://doi.org/10.1093/gbe/evx204openalex-snapshot
The Role of Alternative Splicing and Differential Gene Expression in Cichlid Adaptive Radiation
inferredcites →https://doi.org/10.1093/genetics/151.2.597openalex-snapshot
A Mutation in the Flanking 5′-TA-3′ Dinucleotide Prevents Excision of an Internal Eliminated Sequence From the Paramecium tetraurelia Genome
inferredcites →https://doi.org/10.1093/nar/23.11.2006openalex-snapshot
Consensus inverted terminal repeat sequence ofParameciumlESs: resemblance to termini of Tc1 -related andEuplotesTec transposons
inferredcites →https://doi.org/10.1093/nar/gkn1018openalex-snapshot
Silencing-associated and meiosis-specific small RNA pathways in Paramecium tetraurelia
inferredcites →https://doi.org/10.1093/nar/gkq1283openalex-snapshot
Functional specialization of Piwi proteins in Paramecium tetraurelia from post-transcriptional gene silencing to genome remodelling
inferredcites →https://doi.org/10.1093/nar/gkq918openalex-snapshot
ParameciumDB in 2011: new tools and new data for functional and comparative genomics of the model ciliate Paramecium tetraurelia
inferredcites →https://doi.org/10.1093/nar/gku881openalex-snapshot
HSP90α plays an important role in piRNA biogenesis and retrotransposon repression in mouse
inferredcites →https://doi.org/10.1093/nar/gkv843openalex-snapshot
Cis-acting signals modulate the efficiency of programmed DNA elimination inParamecium tetraurelia
inferredcites →https://doi.org/10.1093/nar/gkw1138openalex-snapshot
PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements
inferredcites →https://doi.org/10.1098/rsob.170172openalex-snapshot
Whats, hows and whys of programmed DNA elimination inTetrahymena
inferredcites →https://doi.org/10.1101/gad.473008openalex-snapshot
Maternal noncoding transcripts antagonize the targeting of DNA elimination by scanRNAs in Paramecium tetraurelia
inferredcites →https://doi.org/10.1101/gad.547309openalex-snapshot
PiggyMac, a domesticated piggyBac transposase involved in programmed genome rearrangements in the ciliate Paramecium tetraurelia
inferredcites →https://doi.org/10.1101/gr.074534.107openalex-snapshot
Analysis of sequence variability in the macronuclear DNA of Paramecium tetraurelia: A somatic view of the germline
inferredcites →https://doi.org/10.1101/gr.177790.114openalex-snapshot
Widespread intron retention in mammals functionally tunes transcriptomes
inferredcites →https://doi.org/10.1101/gr.186585.114openalex-snapshot
Unmasking alternative splicing inside protein-coding exons defines exitrons and their role in proteome plasticity
inferredcites →https://doi.org/10.1111/boc.201100057openalex-snapshot
RNA‐guided DNA rearrangements in ciliates: Is the best genome defence a good offence?
inferredcites →https://doi.org/10.1111/j.1558-5646.1953.tb00070.xopenalex-snapshot
GENETIC ASSIMILATION OF AN ACQUIRED CHARACTER
inferredcites →https://doi.org/10.1126/science.1067338openalex-snapshot
An mRNA Surveillance Mechanism That Eliminates Transcripts Lacking Termination Codons
inferredcites →https://doi.org/10.1126/science.1195487openalex-snapshot
Hsp90 and Environmental Stress Transform the Adaptive Value of Natural Genetic Variation
inferredcites →https://doi.org/10.1126/science.1240276openalex-snapshot
Cryptic Variation in Morphological Evolution: HSP90 as a Capacitor for Loss of Eyes in Cavefish
inferredcites →https://doi.org/10.1128/9781555819217.ch17openalex-snapshot
Programmed Rearrangement in Ciliates: Paramecium
inferredcites →https://doi.org/10.1128/mcb.18.12.7075openalex-snapshot
Homology-Dependent Maternal Inhibition of Developmental Excision of Internal Eliminated Sequences in Paramecium tetraurelia
inferredcites →https://doi.org/10.1128/mcb.24.17.7370-7379.2004openalex-snapshot
RNA-Mediated Programming of Developmental Genome Rearrangements in Paramecium tetraurelia
inferredcites →https://doi.org/10.1128/mmbr.58.2.233-267.1994openalex-snapshot
The DNA of ciliated protozoa.
inferredcites →https://doi.org/10.1128/mr.58.2.233-267.1994openalex-snapshot
The DNA of ciliated protozoa
inferredcites →https://doi.org/10.1146/annurev-genet-110410-132432openalex-snapshot
DNA Elimination in Ciliates: Transposon Domestication and Genome Surveillance
inferredcites →https://doi.org/10.1146/annurev-micro-090816-093342openalex-snapshot
Genetics and Epigenetics of Mating Type Determination in Paramecium and Tetrahymena
inferredcites →https://doi.org/10.1146/annurev.ge.11.120177.002025openalex-snapshot
GENETICS OF CELLULAR DIFFERENTIATION: STABLE NUCLEAR DIFFERENTIATION IN EUCARYOTIC UNICELLS
inferredcites →https://doi.org/10.1146/annurev.immunol.23.021704.115830openalex-snapshot
MECHANISM AND CONTROL OF V(D)J RECOMBINATION AT THE IMMUNOGLOBULIN HEAVY CHAIN LOCUS
inferredcites →https://doi.org/10.1155/2012/436196openalex-snapshot
Transposon Invasion of theParameciumGermline Genome Countered by a Domesticated PiggyBac Transposase and the NHEJ Pathway
inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
inferredcites →https://doi.org/10.1186/s12864-017-3887-zopenalex-snapshot
Improved methods and resources for paramecium genomics: transcription units, gene annotation and gene expression
inferredcites →https://doi.org/10.1371/journal.pgen.0030043openalex-snapshot
Hsp90 Selectively Modulates Phenotype in Vertebrate Development
inferredcites →https://doi.org/10.1371/journal.pgen.1002984openalex-snapshot
The Paramecium Germline Genome Provides a Niche for Intragenic Parasitic DNA: Evolutionary Dynamics of Internal Eliminated Sequences
inferredcites →https://doi.org/10.1371/journal.pgen.1004665openalex-snapshot
Local Effect of Enhancer of Zeste-Like Reveals Cooperation of Epigenetic and cis-Acting Determinants for Zygotic Genome Rearrangements
inferredcites →https://doi.org/10.1371/journal.pone.0030598openalex-snapshot
Coping with Temperature at the Warm Edge – Patterns of Thermal Adaptation in the Microbial Eukaryote Paramecium caudatum
inferredcites →https://doi.org/10.1371/journal.pone.0185056openalex-snapshot
BBMerge – Accurate paired shotgun read merging via overlap
inferredcites →https://doi.org/10.1534/genetics.117.201079openalex-snapshot
Canalization by Selection of de Novo Induced Mutations
inferredcites →https://doi.org/10.1534/genetics.117.205039openalex-snapshot
Waddington Redux: De Novo Mutations Underlie the Genetic Assimilation of Stress-Induced Phenocopies in Drosophila melanogaster
inferredcites →https://doi.org/10.1534/genetics.117.300588openalex-snapshot
Plasticity of Meiotic Recombination Rates in Response to Temperature inArabidopsis
inferredcites →https://doi.org/10.1534/genetics.118.300995openalex-snapshot
Developmental Bias and Evolution: A Regulatory Network Perspective
inferredcites →https://doi.org/10.5962/bhl.title.11942openalex-snapshot
Experimentelle Protistenstudien. von Victor Jollos. I, Untersuchungen ariabilitund Vererbung bei Infusorien
inferredcites →https://doi.org/10.7554/elife.37927openalex-snapshot
Six domesticated PiggyBac transposases together carry out programmed DNA elimination in Paramecium
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1111/jeu.12926openalex-snapshot
Ciliate research: From myth to trendsetting science
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.