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Chromatin-lamin B1 interaction promotes genomic compartmentalization and constrains chromatin dynamics

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.bpj.2018.05.017openalex-snapshot

Intranucleus Single-Molecule Imaging in Living Cells

inferredcites →https://doi.org/10.1016/j.ceb.2016.02.014openalex-snapshot

How to rule the nucleus: divide et impera

inferredcites →https://doi.org/10.1016/j.cell.2013.01.009openalex-snapshot

LBR and Lamin A/C Sequentially Tether Peripheral Heterochromatin and Inversely Regulate Differentiation

inferredcites →https://doi.org/10.1016/j.cell.2013.02.028openalex-snapshot

Single-Cell Dynamics of Genome-Nuclear Lamina Interactions

inferredcites →https://doi.org/10.1016/j.cell.2014.08.030openalex-snapshot

Interchromosomal Homology Searches Drive Directional ALT Telomere Movement and Synapsis

inferredcites →https://doi.org/10.1016/j.cell.2014.11.021openalex-snapshot

A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping

inferredcites →https://doi.org/10.1016/j.cell.2015.01.054openalex-snapshot

Chromatin Fibers Are Formed by Heterogeneous Groups of Nucleosomes In Vivo

inferredcites →https://doi.org/10.1016/j.cell.2015.08.040openalex-snapshot

Genome-wide Maps of Nuclear Lamina Interactions in Single Human Cells

inferredcites →https://doi.org/10.1016/j.cell.2017.04.013openalex-snapshot

The Cohesin Release Factor WAPL Restricts Chromatin Loop Extension

inferredcites →https://doi.org/10.1016/j.cell.2017.04.022openalex-snapshot

Lamina-Associated Domains: Links with Chromosome Architecture, Heterochromatin, and Gene Repression

inferredcites →https://doi.org/10.1016/j.cell.2017.05.004openalex-snapshot

Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization

inferredcites →https://doi.org/10.1016/j.cell.2017.09.026openalex-snapshot

Cohesin Loss Eliminates All Loop Domains

inferredcites →https://doi.org/10.1016/j.cub.2006.03.059openalex-snapshot

Long-Range Directional Movement of an Interphase Chromosome Site

inferredcites →https://doi.org/10.1016/j.febslet.2012.01.007openalex-snapshot

Crystal structures of the coil 2B fragment and the globular tail domain of human lamin B1

inferredcites →https://doi.org/10.1016/j.molcel.2013.10.021openalex-snapshot

Centromere Tethering Confines Chromosome Domains

inferredcites →https://doi.org/10.1016/j.molcel.2018.02.007openalex-snapshot

Inter-chromosomal Contact Properties in Live-Cell Imaging and in Hi-C

inferredcites →https://doi.org/10.1016/j.molcel.2018.05.017openalex-snapshot

Lamins Organize the Global Three-Dimensional Genome from the Nuclear Periphery

inferredcites →https://doi.org/10.1016/s0006-3495(00)76282-5openalex-snapshot

Size-Dependent Positioning of Human Chromosomes in Interphase Nuclei

inferredcites →https://doi.org/10.1016/s0960-9822(02)00695-4openalex-snapshot

Chromatin Motion Is Constrained by Association with Nuclear Compartments in Human Cells

inferredcites →https://doi.org/10.1038/nature07433openalex-snapshot

53BP1 promotes non-homologous end joining of telomeres by increasing chromatin mobility

inferredcites →https://doi.org/10.1038/nature08497openalex-snapshot

An oestrogen-receptor-α-bound human chromatin interactome

inferredcites →https://doi.org/10.1038/nature11049openalex-snapshot

Spatial partitioning of the regulatory landscape of the X-inactivation centre

inferredcites →https://doi.org/10.1038/nature11082openalex-snapshot

Topological domains in mammalian genomes identified by analysis of chromatin interactions

inferredcites →https://doi.org/10.1038/nature12593openalex-snapshot

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

inferredcites →https://doi.org/10.1038/nature14450openalex-snapshot

Condensin-driven remodelling of X chromosome topology during dosage compensation

inferredcites →https://doi.org/10.1038/nature16496openalex-snapshot

Super-resolution imaging reveals distinct chromatin folding for different epigenetic states

inferredcites →https://doi.org/10.1038/nature23263openalex-snapshot

Allelic reprogramming of 3D chromatin architecture during early mammalian development

inferredcites →https://doi.org/10.1038/nature24281openalex-snapshot

Two independent modes of chromatin organization revealed by cohesin removal

inferredcites →https://doi.org/10.1038/ncomms3003openalex-snapshot

Short-time movement of E. coli chromosomal loci depends on coordinate and subcellular localization

inferredcites →https://doi.org/10.1038/ncomms9044openalex-snapshot

Loss of lamin A function increases chromatin dynamics in the nuclear interior

inferredcites →https://doi.org/10.1038/ng1896openalex-snapshot

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture–on-chip (4C)

inferredcites →https://doi.org/10.1038/nmeth.1237openalex-snapshot

Robust single-particle tracking in live-cell time-lapse sequences

inferredcites →https://doi.org/10.1038/nmeth.2148openalex-snapshot

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

inferredcites →https://doi.org/10.1038/nmeth929openalex-snapshot

Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM)

inferredcites →https://doi.org/10.1038/nrm.2017.101openalex-snapshot

Regulation of genome organization and gene expression by nuclear mechanotransduction

inferredcites →https://doi.org/10.1073/pnas.0402606101openalex-snapshot

Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial DNA replication

inferredcites →https://doi.org/10.1073/pnas.1420024112openalex-snapshot

Multicolor CRISPR labeling of chromosomal loci in human cells

inferredcites →https://doi.org/10.1073/pnas.1717730115openalex-snapshot

Chromatin organization by an interplay of loop extrusion and compartmental segregation

inferredcites →https://doi.org/10.1073/pnas.1806297115openalex-snapshot

Anomalous diffusion, spatial coherence, and viscoelasticity from the energy landscape of human chromosomes

inferredcites →https://doi.org/10.1080/19491034.2018.1449498openalex-snapshot

Laminopathy-causing lamin A mutations reconfigure lamina-associated domains and local spatial chromatin conformation

inferredcites →https://doi.org/10.1083/jcb.145.6.1119openalex-snapshot

Differences in the Localization and Morphology of Chromosomes in the Human Nucleus

inferredcites →https://doi.org/10.1083/jcb.200304096openalex-snapshot

Inheritance of gene density–related higher order chromatin arrangements in normal and tumor cell nuclei

inferredcites →https://doi.org/10.1083/jcb.201208186openalex-snapshot

Systematic characterization of the conformation and dynamics of budding yeast chromosome XII

inferredcites →https://doi.org/10.1083/jcb.66.1.188openalex-snapshot

Rapid flow cytofluorometric analysis of mammalian cell cycle by propidium iodide staining.

inferredcites →https://doi.org/10.1093/bioinformatics/bts521openalex-snapshot

HiTC: exploration of high-throughput ‘C’ experiments

inferredcites →https://doi.org/10.1093/nar/gkv624openalex-snapshot

Simultaneous live imaging of the transcription and nuclear position of specific genes

inferredcites →https://doi.org/10.1096/fj.14-250456openalex-snapshot

Loss of lamin B1 results in prolongation of S phase and decondensation of chromosome territories

inferredcites →https://doi.org/10.1101/122226openalex-snapshot

Chromosome Conformation Paints Reveal the Role of Lamina Association in Genome Organization and Regulation

inferredcites →https://doi.org/10.1101/244038openalex-snapshot

Heterochromatin drives organization of conventional and inverted nuclei

inferredcites →https://doi.org/10.1101/gad.1735208openalex-snapshot

The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization and transcription

inferredcites →https://doi.org/10.1101/gr.141028.112openalex-snapshot

Constitutive nuclear lamina–genome interactions are highly conserved and associated with A/T-rich sequence

inferredcites →https://doi.org/10.1101/gr.157008.113openalex-snapshot

High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome

inferredcites →https://doi.org/10.1101/gr.196220.115openalex-snapshot

A-type lamins bind both hetero- and euchromatin, the latter being regulated by lamina-associated polypeptide 2 alpha

inferredcites →https://doi.org/10.1101/gr.224576.117openalex-snapshot

The nuclear matrix protein HNRNPU maintains 3D genome architecture globally in mouse hepatocytes

inferredcites →https://doi.org/10.1101/gr.5571506openalex-snapshot

Chromosome Conformation Capture Carbon Copy (5C): A massively parallel solution for mapping interactions between genomic elements

inferredcites →https://doi.org/10.1126/science.1067799openalex-snapshot

Capturing Chromosome Conformation

inferredcites →https://doi.org/10.1126/science.1181369openalex-snapshot

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

inferredcites →https://doi.org/10.1126/science.aaf8084openalex-snapshot

Spatial organization of chromatin domains and compartments in single chromosomes

inferredcites →https://doi.org/10.1126/science.aao3136openalex-snapshot

Transcription-coupled changes in nuclear mobility of mammalian cis-regulatory elements

inferredcites →https://doi.org/10.1126/science.aau1783openalex-snapshot

Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells

inferredcites →https://doi.org/10.1136/jmedgenet-2013-102119openalex-snapshot

Normal and aberrant splicing of LMNA

inferredcites →https://doi.org/10.1146/annurev-biochem-060614-034115openalex-snapshot

Lamins: Nuclear Intermediate Filament Proteins with Fundamental Functions in Nuclear Mechanics and Genome Regulation

inferredcites →https://doi.org/10.1146/annurev.biophys.093008.131348openalex-snapshot

Chromatin Dynamics

inferredcites →https://doi.org/10.1186/s13059-015-0831-xopenalex-snapshot

HiC-Pro: an optimized and flexible pipeline for Hi-C data processing

inferredcites →https://doi.org/10.1242/jcs.087288openalex-snapshot

Lamins at a glance

inferredcites →https://doi.org/10.1242/jcs.133678openalex-snapshot

Centromeric motion facilitates the mobility of interphase genomic regions in fission yeast

inferredcites →https://doi.org/10.1371/journal.pcbi.1006617openalex-snapshot

Chain organization of human interphase chromosome determines the spatiotemporal dynamics of chromatin loci

inferredcites →https://doi.org/10.15252/embj.201798004openalex-snapshot

Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s11427-019-1613-3openalex-snapshot

Architectural proteins for the formation and maintenance of the 3D genome

inferred← citeshttps://doi.org/10.1016/j.gde.2020.03.001openalex-snapshot

Chromosome dynamics during interphase: a biophysical perspective

inferred← citeshttps://doi.org/10.1016/j.tcb.2020.09.003openalex-snapshot

Histone Variants and Histone Modifications in Neurogenesis

inferred← citeshttps://doi.org/10.20944/preprints202009.0604.v1openalex-snapshot

Structure-Function Relationships of Nuclear Lamins

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.