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Nutrient-dependent mTORC1 signaling in coral-algal symbiosis

https://doi.org/10.1101/723312
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/mrd.22489openalex-snapshot
The ImageJ ecosystem: An open platform for biomedical image analysis
inferredcites →https://doi.org/10.1007/s00338-011-0868-6openalex-snapshot
Diel rhythmicity of lipid-body formation in a coral-Symbiodinium endosymbiosis
inferredcites →https://doi.org/10.1016/0022-0981(85)90170-4openalex-snapshot
Individual and population growth in the asexually reproducing anemone Aiptasia pallida Verrill
inferredcites →https://doi.org/10.1016/j.bbrc.2004.09.151openalex-snapshot
Molecular cloning of Rab5 (ApRab5) in Aiptasia pulchella and its retention in phagosomes harboring live zooxanthellae
inferredcites →https://doi.org/10.1016/j.cell.2015.02.041openalex-snapshot
Nutrient-Sensing Mechanisms across Evolution
inferredcites →https://doi.org/10.1016/j.cub.2018.07.008openalex-snapshot
Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts
inferredcites →https://doi.org/10.1016/j.mam.2006.08.005openalex-snapshot
Roles of LAMP-1 and LAMP-2 in lysosome biogenesis and autophagy
inferredcites →https://doi.org/10.1038/emboj.2012.32openalex-snapshot
A lysosome‐to‐nucleus signalling mechanism senses and regulates the lysosome via mTOR and TFEB
inferredcites →https://doi.org/10.1038/ncb2718openalex-snapshot
TFEB controls cellular lipid metabolism through a starvation-induced autoregulatory loop
inferredcites →https://doi.org/10.1038/ncb2741openalex-snapshot
MXL-3 and HLH-30 transcriptionally link lipolysis and autophagy to nutrient availability
inferredcites →https://doi.org/10.1038/ncomms3267openalex-snapshot
The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans
inferredcites →https://doi.org/10.1038/nmeth.2019openalex-snapshot
Fiji: an open-source platform for biological-image analysis
inferredcites →https://doi.org/10.1038/nmeth.4285openalex-snapshot
ModelFinder: fast model selection for accurate phylogenetic estimates
inferredcites →https://doi.org/10.1038/nprot.2014.006openalex-snapshot
Full-length RNA-seq from single cells using Smart-seq2
inferredcites →https://doi.org/10.1038/s41598-018-34575-5openalex-snapshot
Transcriptomic changes with increasing algal symbiont reveal the detailed process underlying establishment of coral-algal symbiosis
inferredcites →https://doi.org/10.1038/srep15677openalex-snapshot
Induction of Gametogenesis in the Cnidarian Endosymbiosis Model Aiptasia sp.
inferredcites →https://doi.org/10.1038/srep19867openalex-snapshot
Development and Symbiosis Establishment in the Cnidarian Endosymbiosis Model Aiptasia sp.
inferredcites →https://doi.org/10.1038/srep32366openalex-snapshot
Aiptasia sp. larvae as a model to reveal mechanisms of symbiont selection in cnidarians
inferredcites →https://doi.org/10.1042/bst20130014openalex-snapshot
Mechanisms of microbial escape from phagocyte killing
inferredcites →https://doi.org/10.1053/ejpn.2000.0428openalex-snapshot
Lysosomal membrane proteins
inferredcites →https://doi.org/10.1073/pnas.1413483112openalex-snapshot
Coral host cells acidify symbiotic algal microenvironment to promote photosynthesis
inferredcites →https://doi.org/10.1073/pnas.1513318112openalex-snapshot
The genome of Aiptasia , a sea anemone model for coral symbiosis
inferredcites →https://doi.org/10.1073/pnas.1710733114openalex-snapshot
Optimal nutrient exchange and immune responses operate in partner specificity in the cnidarian-dinoflagellate symbiosis
inferredcites →https://doi.org/10.1080/15548627.2015.1134081openalex-snapshot
DrosophilaMitf regulates the V-ATPase and the lysosomal-autophagic pathway
inferredcites →https://doi.org/10.1089/omi.2011.0118openalex-snapshot
clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
inferredcites →https://doi.org/10.1093/bioinformatics/btm404openalex-snapshot
Clustal W and Clustal X version 2.0
inferredcites →https://doi.org/10.1093/bioinformatics/btp348openalex-snapshot
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
inferredcites →https://doi.org/10.1093/bioinformatics/btr088openalex-snapshot
ProtTest 3: fast selection of best-fit models of protein evolution
inferredcites →https://doi.org/10.1093/bioinformatics/btw313openalex-snapshot
Complex heatmaps reveal patterns and correlations in multidimensional genomic data
inferredcites →https://doi.org/10.1093/hmg/ddr306openalex-snapshot
Characterization of the CLEAR network reveals an integrated control of cellular clearance pathways
inferredcites →https://doi.org/10.1093/molbev/msu300openalex-snapshot
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
inferredcites →https://doi.org/10.1093/nar/gkx922openalex-snapshot
20 years of the SMART protein domain annotation resource
inferredcites →https://doi.org/10.1101/gad.1212704openalex-snapshot
Upstream and downstream of mTOR
inferredcites →https://doi.org/10.1109/isbi.2011.5872394openalex-snapshot
Ilastik: Interactive learning and segmentation toolkit
inferredcites →https://doi.org/10.1111/j.1365-3040.2008.01802.xopenalex-snapshot
Metabolic interactions between algal symbionts and invertebrate hosts
inferredcites →https://doi.org/10.1111/j.1525-142x.2007.00173.xopenalex-snapshot
Embryonic development in two species of scleractinian coral embryos: Symbiodinium localization and mode of gastrulation
inferredcites →https://doi.org/10.1111/mec.13659openalex-snapshot
The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome
inferredcites →https://doi.org/10.1111/nyas.13131openalex-snapshot
Transcription factor EB: from master coordinator of lysosomal pathways to candidate therapeutic target in degenerative storage diseases
inferredcites →https://doi.org/10.1126/sciadv.1500681openalex-snapshot
Nutritional input from dinoflagellate symbionts in reef-building corals is minimal during planula larval life stage
inferredcites →https://doi.org/10.1126/science.1157535openalex-snapshot
The Rag GTPases Bind Raptor and Mediate Amino Acid Signaling to mTORC1
inferredcites →https://doi.org/10.1126/science.1174447openalex-snapshot
A Gene Network Regulating Lysosomal Biogenesis and Function
inferredcites →https://doi.org/10.1126/science.1204592openalex-snapshot
TFEB Links Autophagy to Lysosomal Biogenesis
inferredcites →https://doi.org/10.1126/science.aag1417openalex-snapshot
Lysosomal cholesterol activates mTORC1 via an SLC38A9–Niemann-Pick C1 signaling complex
inferredcites →https://doi.org/10.1126/scisignal.2002790openalex-snapshot
The Transcription Factor TFEB Links mTORC1 Signaling to Transcriptional Control of Lysosome Homeostasis
inferredcites →https://doi.org/10.1128/mmbr.05014-11openalex-snapshot
Cell Biology of Cnidarian-Dinoflagellate Symbiosis
inferredcites →https://doi.org/10.1146/annurev-cellbio-111315-125125openalex-snapshot
The Lysosome as a Regulatory Hub
inferredcites →https://doi.org/10.1242/jeb.095679openalex-snapshot
Similar specificities of symbiont uptake by adults and larvae in an anemone model system for coral biology
inferredcites →https://doi.org/10.1351/pac198153040837openalex-snapshot
Sterol biosynthesis and metabolism in marine invertebrates
inferredcites →https://doi.org/10.1371/journal.pone.0195755openalex-snapshot
Optimization of the cydex blue assay: A one-step colorimetric protein assay using cyclodextrins and compatible with detergents and reducers
inferredcites →https://doi.org/10.1534/g3.113.009084openalex-snapshot
Extensive Differences in Gene Expression Between Symbiotic and Aposymbiotic Cnidarians
inferredcites →https://doi.org/10.4161/auto.19653openalex-snapshot
MTORC1 functions as a transcriptional regulator of autophagy by preventing nuclear transport of TFEB
inferredcites →https://doi.org/10.4319/lo.1994.39.4.0925openalex-snapshot
Do symbiotic dinoflagellates secrete lipid droplets?
inferredcites →https://doi.org/10.7554/elife.43923openalex-snapshot
Sterol transfer by atypical cholesterol-binding NPC2 proteins in coral-algal symbiosis

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s00338-025-02720-yopenalex-snapshot
Oxylipin signalling in a coral-dinoflagellate symbiosis
inferred← citeshttps://doi.org/10.1038/s41564-021-00897-wopenalex-snapshot
Dinoflagellate symbionts escape vomocytosis by host cell immune suppression
inferred← citeshttps://doi.org/10.1038/s41598-021-82489-6openalex-snapshot
Immature symbiotic system between horizontally transmitted green algae and brown hydra
inferred← citeshttps://doi.org/10.1111/1462-2920.70015openalex-snapshot
Oxylipin Receptors and Their Role in Inter‐Partner Signalling in a Model Cnidarian‐Dinoflagellate Symbiosis
inferred← citeshttps://doi.org/10.1242/jeb.229906openalex-snapshot
Differential expression of Exaiptasia pallida GIMAP genes upon induction of apoptosis and autophagy suggests a potential role in cnidarian symbiosis and disease
inferred← citeshttps://doi.org/10.25148/etd.fidc009548openalex-snapshot
A Comparative Genomics Exploration of Inter-partner Metabolic Signaling in the Coral-algal Symbiosis
inferred← citeshttps://doi.org/10.26686/wgtn.16727266openalex-snapshot
Host-Symbiont Biomass Regulation in the Cnidarian-Dinoflagellate Symbiosis
inferred← citeshttps://doi.org/10.26686/wgtn.16727266.v2openalex-snapshot
Host-Symbiont Biomass Regulation in the Cnidarian-Dinoflagellate Symbiosis
inferred← citeshttps://doi.org/10.3389/fmicb.2022.1094255openalex-snapshot
Genomic conservation and putative downstream functionality of the phosphatidylinositol signalling pathway in the cnidarian-dinoflagellate symbiosis
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