On the public citation graph

Translational readthrough goes unseen by natural selection

https://doi.org/10.1101/844621
0 signed · 62 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/scdb.1999.0332openalex-snapshot
Gene duplication and the uniqueness of vertebrate genomes circa 1970–1999
inferredcites →https://doi.org/10.1016/j.cell.2008.05.042openalex-snapshot
Mistranslation-Induced Protein Misfolding as a Dominant Constraint on Coding-Sequence Evolution
inferredcites →https://doi.org/10.1016/j.molcel.2017.07.010openalex-snapshot
Heterogeneity of Stop Codon Readthrough in Single Bacterial Cells and Implications for Population Fitness
inferredcites →https://doi.org/10.1016/j.tree.2006.06.015openalex-snapshot
The genomic rate of adaptive evolution
inferredcites →https://doi.org/10.1038/351652a0openalex-snapshot
Adaptive protein evolution at the Adh locus in Drosophila
inferredcites →https://doi.org/10.1038/nature11051openalex-snapshot
Cryptic peroxisomal targeting via alternative splicing and stop codon read-through in fungi
inferredcites →https://doi.org/10.1038/nature12511openalex-snapshot
Genome-wide signatures of convergent evolution in echolocating mammals
inferredcites →https://doi.org/10.1038/nchembio.441openalex-snapshot
Messy biology and the origins of evolutionary innovations
inferredcites →https://doi.org/10.1038/nprot.2013.099openalex-snapshot
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor
inferredcites →https://doi.org/10.1038/s41559-017-0425-yopenalex-snapshot
Evolutionary determinants of genome-wide nucleotide composition
inferredcites →https://doi.org/10.1038/s41559-018-0506-6openalex-snapshot
Translation of neutrally evolving peptides provides a basis for de novo gene evolution
inferredcites →https://doi.org/10.1038/s41580-018-0040-zopenalex-snapshot
Regulation of proteasome assembly and activity in health and disease
inferredcites →https://doi.org/10.1038/s41586-018-0030-5openalex-snapshot
Genome evolution across 1,011 Saccharomyces cerevisiae isolates
inferredcites →https://doi.org/10.1038/srep32142openalex-snapshot
Computational analysis of translational readthrough proteins in Drosophila and yeast reveals parallels to alternative splicing
inferredcites →https://doi.org/10.1073/pnas.0504070102openalex-snapshot
Why highly expressed proteins evolve slowly
inferredcites →https://doi.org/10.1073/pnas.1510071112openalex-snapshot
Mistranslation drives the evolution of robustness in TEM-1 β-lactamase
inferredcites →https://doi.org/10.1093/bioinformatics/bti541openalex-snapshot
IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btr509openalex-snapshot
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
inferredcites →https://doi.org/10.1093/bioinformatics/bts577openalex-snapshot
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data
inferredcites →https://doi.org/10.1093/bioinformatics/btu638openalex-snapshot
HTSeq—a Python framework to work with high-throughput sequencing data
inferredcites →https://doi.org/10.1093/database/bar062openalex-snapshot
YeastMine—an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit
inferredcites →https://doi.org/10.1093/embo-reports/kve176openalex-snapshot
Impact of the six nucleotides downstream of the stop codon on translation termination
inferredcites →https://doi.org/10.1093/molbev/msm284openalex-snapshot
Mutation-Selection Models of Codon Substitution and Their Use to Estimate Selective Strengths on Codon Usage
inferredcites →https://doi.org/10.1093/molbev/msq249openalex-snapshot
Estimation of the Neutrality Index
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/molbev/msv014openalex-snapshot
No Genome-Wide Protein Sequence Convergence for Echolocation
inferredcites →https://doi.org/10.1093/molbev/msx315openalex-snapshot
A Molecular Portrait of De Novo Genes in Yeasts
inferredcites →https://doi.org/10.1093/nar/15.3.1281openalex-snapshot
The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications
inferredcites →https://doi.org/10.1093/nar/gkf436openalex-snapshot
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
inferredcites →https://doi.org/10.1093/nar/gkr1029openalex-snapshot
Saccharomyces Genome Database: the genomics resource of budding yeast
inferredcites →https://doi.org/10.1093/nar/gkr853openalex-snapshot
PomBase: a comprehensive online resource for fission yeast
inferredcites →https://doi.org/10.1093/nar/gku301openalex-snapshot
InterMine: extensive web services for modern biology
inferredcites →https://doi.org/10.1093/nar/gku608openalex-snapshot
Evidence of efficient stop codon readthrough in four mammalian genes
inferredcites →https://doi.org/10.1093/nar/gky778openalex-snapshot
Robustness by intrinsically disordered C-termini and translational readthrough
inferredcites →https://doi.org/10.1093/nar/gky961openalex-snapshot
PomBase 2018: user-driven reimplementation of the fission yeast database provides rapid and intuitive access to diverse, interconnected information
inferredcites →https://doi.org/10.1101/gr.221507.117openalex-snapshot
Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data
inferredcites →https://doi.org/10.1111/1462-2920.12243openalex-snapshot
Phenotypic heterogeneity is a selected trait in natural yeast populations subject to environmental stress
inferredcites →https://doi.org/10.1126/science.1089370openalex-snapshot
The Origins of Genome Complexity
inferredcites →https://doi.org/10.1126/science.1168978openalex-snapshot
Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
inferredcites →https://doi.org/10.1128/mbio.01018-18openalex-snapshot
Errors during Gene Expression: Single-Cell Heterogeneity, Stress Resistance, and Microbe-Host Interactions
inferredcites →https://doi.org/10.1159/000063562openalex-snapshot
Convergent Evolution on the Molecular Level
inferredcites →https://doi.org/10.1186/1471-2105-6-31openalex-snapshot
Automated generation of heuristics for biological sequence comparison
inferredcites →https://doi.org/10.1186/1745-6150-3-18openalex-snapshot
The look-ahead effect of phenotypic mutations
inferredcites →https://doi.org/10.1186/1745-6150-3-40openalex-snapshot
Comparable contributions of structural-functional constraints and expression level to the rate of protein sequence evolution
inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
inferredcites →https://doi.org/10.1186/gb-2010-11-8-r87openalex-snapshot
Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species
inferredcites →https://doi.org/10.1261/rna.294907openalex-snapshot
The frequency of translational misreading errors in E. coli is largely determined by tRNA competition
inferredcites →https://doi.org/10.1371/journal.pbio.1002607openalex-snapshot
Correction: Phenotypic heterogeneity promotes adaptive evolution
inferredcites →https://doi.org/10.1371/journal.pcbi.1005375openalex-snapshot
High GC content causes orphan proteins to be intrinsically disordered
inferredcites →https://doi.org/10.1371/journal.pgen.1004685openalex-snapshot
Ribosomal Readthrough at a Short UGA Stop Codon Context Triggers Dual Localization of Metabolic Enzymes in Fungi and Animals
inferredcites →https://doi.org/10.1371/journal.pgen.1005445openalex-snapshot
The Evolutionary Potential of Phenotypic Mutations
inferredcites →https://doi.org/10.1371/journal.pgen.1006196openalex-snapshot
Functional Translational Readthrough: A Systems Biology Perspective
inferredcites →https://doi.org/10.1371/journal.pgen.1008141openalex-snapshot
Stop-codon read-through arises largely from molecular errors and is generally nonadaptive
inferredcites →https://doi.org/10.1534/g3.111.000273openalex-snapshot
The Awesome Power of Yeast Evolutionary Genetics: New Genome Sequences and Strain Resources for theSaccharomyces sensu strictoGenus
inferredcites →https://doi.org/10.1534/g3.113.008995openalex-snapshot
The Reference Genome Sequence ofSaccharomyces cerevisiae: Then and Now
inferredcites →https://doi.org/10.1534/genetics.105.046599openalex-snapshot
Why Are Phenotypic Mutation Rates Much Higher Than Genotypic Mutation Rates?
inferredcites →https://doi.org/10.1534/genetics.108.090456openalex-snapshot
The Cellular, Developmental and Population-Genetic Determinants of Mutation-Rate Evolution
inferredcites →https://doi.org/10.1534/genetics.115.177329openalex-snapshot
The Spontaneous Mutation Rate in the Fission Yeast Schizosaccharomyces pombe
inferredcites →https://doi.org/10.5860/choice.45-0862openalex-snapshot
The origins of genome architecture
inferredcites →https://doi.org/10.7554/elife.01179openalex-snapshot
Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster
inferredcites →https://doi.org/10.7554/elife.29216openalex-snapshot
Regulated Ire1-dependent mRNA decay requires no-go mRNA degradation to maintain endoplasmic reticulum homeostasis in S. pombe
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.