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The local environment determines the assembly of root endophytic fungi at a continental scale

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Fungal Ecology

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Mycorrhizas in ecosystems

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Fungal Assemblages Associated with Roots of Halophytic and Non-halophytic Plant Species Vary Differentially Along a Salinity Gradient

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Ecologically meaningful transformations for ordination of species data

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Arbuscular mycorrhizal fungal communities in sub-Saharan Savannas of Benin, West Africa, as affected by agricultural land use intensity and ecological zone

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Culturable fungal endophytes in roots of Enkianthus campanulatus (Ericaceae)

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Endophytic mycobiota of leaves and roots of the grass Holcus lanatus

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The endophytic mycobiota of Arabidopsis thaliana

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Root-associated fungi of Arabidopsis thaliana and Microthlaspi perfoliatum

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PCR protocols — A guide to methods and applications

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Unveiling the hidden culturable endophytic fungal diversity in aerial vegetative parts of Wrightia tinctoria (Roxb.) R.Br. of southern Aravalli hills

inferred← citeshttps://doi.org/10.1071/sr24073openalex-snapshot

Soil properties and environmental factors across different altitudes influence biodiversity of root endophytic fungi in the orchid Bletilla sinensis

inferred← citeshttps://doi.org/10.1073/pnas.1710455114openalex-snapshot

Root-associated fungal microbiota of nonmycorrhizal Arabis alpina and its contribution to plant phosphorus nutrition

inferred← citeshttps://doi.org/10.1073/pnas.1716329114openalex-snapshot

Continuum of root–fungal symbioses for plant nutrition

inferred← citeshttps://doi.org/10.1080/00275514.2017.1406748openalex-snapshot

Cadophora meredithiae and C. interclivum , new species from roots of sedge and spruce in a western Canada subalpine forest

inferred← citeshttps://doi.org/10.1080/00275514.2018.1448167openalex-snapshot

Inhabiting plant roots, nematodes, and truffles—Polyphilus, a new helotialean genus with two globally distributed species

inferred← citeshttps://doi.org/10.1080/00275514.2020.1803649openalex-snapshot

Pygmaeomycetaceae, a new root-associated family in Mucoromycotina from the pygmy pine plains

inferred← citeshttps://doi.org/10.1080/00275514.2023.2258269openalex-snapshot

Pleoardoris graminearum , gen. et sp. nov., a new member of Pleosporales from North American Plains, its biogeography and effects on a foundation grass species

inferred← citeshttps://doi.org/10.1080/17550874.2018.1504332openalex-snapshot

Host species identity in annual Brassicaceae has a limited effect on the assembly of root-endophytic fungal communities

inferred← citeshttps://doi.org/10.1093/femsec/fiad034openalex-snapshot

Drivers of bacterial and fungal root endophyte communities: understanding the relative influence of host plant, environment, and space

inferred← citeshttps://doi.org/10.1093/femsec/fix162openalex-snapshot

The effects of fungal root endophytes on plant growth are stable along gradients of abiotic habitat conditions

inferred← citeshttps://doi.org/10.1093/femsle/fnaf030openalex-snapshot

Environmental and host plant effects on taxonomic and phylogenetic diversity of root fungal endophytes

inferred← citeshttps://doi.org/10.1093/g3journal/jkae272openalex-snapshot

Comparative genomics reveals putative copper tolerance genes in a Fusarium oxysporum strain

inferred← citeshttps://doi.org/10.1101/2023.12.29.572992openalex-snapshot

Time-resolved transcriptomics reveal a mechanism of host niche defense: beneficial root endophytes deploy a host-protective antimicrobial GH18-CBM5 chitinase

inferred← citeshttps://doi.org/10.1101/2025.01.22.634355openalex-snapshot

Warming disrupts plant-fungal endophyte symbiosis more strongly in leaves than roots

inferred← citeshttps://doi.org/10.1101/793471openalex-snapshot

The diversity and distribution of endophytes across biomes, plant phylogeny, and host tissues—how far have we come and where do we go from here?

inferred← citeshttps://doi.org/10.1111/1365-2745.13584openalex-snapshot

Fungal root endophytes influence plants in a species‐specific manner that depends on plant's growth stage

inferred← citeshttps://doi.org/10.1111/1462-2920.14072openalex-snapshot

Metabolomics‐based chemotaxonomy of root endophytic fungi for natural products discovery

inferred← citeshttps://doi.org/10.1111/1462-2920.14968openalex-snapshot

The diversity and distribution of endophytes across biomes, plant phylogeny and host tissues: how far have we come and where do we go from here?

inferred← citeshttps://doi.org/10.1111/1462-2920.70082openalex-snapshot

Needle in a Haystack: Culturing Plant‐Beneficial Helotiales Lineages From Plant Roots

inferred← citeshttps://doi.org/10.1111/1751-7915.13308openalex-snapshot

Endophytic fungal community of Dysphania ambrosioides from two heavy metal‐contaminated sites: evaluated by culture‐dependent and culture‐independent approaches

inferred← citeshttps://doi.org/10.1111/1755-0998.13097openalex-snapshot

Exploring the accuracy of amplicon‐based internal transcribed spacer markers for a fungal community

inferred← citeshttps://doi.org/10.1111/1758-2229.12976openalex-snapshot

Different patterns of belowground fungal diversity along altitudinal gradients with respect to microhabitat and guild types

inferred← citeshttps://doi.org/10.1111/brv.13085openalex-snapshot

Fungal endophytes can modulate plant invasion

inferred← citeshttps://doi.org/10.1111/gcb.70207openalex-snapshot

Warming Disrupts Plant–Fungal Endophyte Symbiosis More Severely in Leaves Than Roots

inferred← citeshttps://doi.org/10.1111/jbi.14260openalex-snapshot

Biogeography of root‐associated fungi in foundation grasses of North American plains

inferred← citeshttps://doi.org/10.1111/mec.14231openalex-snapshot

Genotypic diversity in root‐endophytic fungi reflects efficient dispersal and environmental adaptation

inferred← citeshttps://doi.org/10.1111/mec.17529openalex-snapshot

Host preference explains the high endemism of ectomycorrhizal fungi in a dipterocarp rainforest

inferred← citeshttps://doi.org/10.1111/nph.14873openalex-snapshot

Facultative root‐colonizing fungi dominate endophytic assemblages in roots of nonmycorrhizal Microthlaspi species

inferred← citeshttps://doi.org/10.1111/nph.18061openalex-snapshot

Unearthing the plant–microbe quid pro quo in root associations with beneficial fungi

inferred← citeshttps://doi.org/10.1111/nph.20080openalex-snapshot

Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18 ‐ CBM5 chitinase to protect their hosts

inferred← citeshttps://doi.org/10.1146/annurev-phyto-080516-035623openalex-snapshot

Interplay Between Innate Immunity and the Plant Microbiota

inferred← citeshttps://doi.org/10.1186/s40168-018-0445-0openalex-snapshot

Microbial interactions within the plant holobiont

inferred← citeshttps://doi.org/10.1186/s43008-020-00036-wopenalex-snapshot

Brassicaceous roots as an unexpected diversity hot-spot of helotialean endophytes

inferred← citeshttps://doi.org/10.1186/s43008-023-00113-wopenalex-snapshot

Polydomus karssenii gen. nov. sp. nov. is a dark septate endophyte with a bifunctional lifestyle parasitising eggs of plant parasitic cyst nematodes (Heterodera spp.)

inferred← citeshttps://doi.org/10.1371/journal.pone.0182017openalex-snapshot

Endophytic fungal communities of Polygonum acuminatum and Aeschynomene fluminensis are influenced by soil mercury contamination

inferred← citeshttps://doi.org/10.1371/journal.pone.0214975openalex-snapshot

Infection of Plasmodiophora brassicae changes the fungal endophyte community of tumourous stem mustard roots as revealed by high-throughput sequencing and culture-dependent methods

inferred← citeshttps://doi.org/10.1515/ausae-2016-0001openalex-snapshot

Effect of crop management and cultivar on colonization of Capsicum annuum L. by Endophytic Fungi

inferred← citeshttps://doi.org/10.1660/062.126.0107openalex-snapshot

Amorpha canescens and Andropogon gerardii Recruit Comparable Foliar Fungal Communities Across the Steep Precipitation Gradient in Kansas

inferred← citeshttps://doi.org/10.21203/rs.3.rs-3724855/v1openalex-snapshot

Seasonal dynamics of endophytic fungal diversity Grevillea robusta (Silver oak) trees

inferred← citeshttps://doi.org/10.21203/rs.3.rs-5179528/v1openalex-snapshot

Vegetation indices of grain crops and diversity of rhizospheric microflora in conditions of biological agriculture of Western Siberia

inferred← citeshttps://doi.org/10.2139/ssrn.6032322openalex-snapshot

Differences in endophytic fungal communities between aboveground and belowground organs in Larix sibirica seedlings, and the unexpected occurrence of ectomycorrhizal Russula in both

inferred← citeshttps://doi.org/10.2174/9789815079753124030018openalex-snapshot

Interaction of Plant-parasitic Nematode and Filamentous Fungi: an Insight Story of Mechanism Involved and Tool for Sustainable Agriculture

inferred← citeshttps://doi.org/10.22215/etd/2022-15022openalex-snapshot

The Biodiversity of Microfungi Isolated from the Bark of the Sugar Maple (Acer saccharum)

inferred← citeshttps://doi.org/10.29050/harranziraat.1736913openalex-snapshot

Microbial sentinels in plant tissues: isolation and profiling of fungal and bacterial endophytes from diverse ecosystems of Sakarya Province

inferred← citeshttps://doi.org/10.30550/j.lil/2156openalex-snapshot

Micorrizas y otros hongos endófitos radiculares en siete especies vegetales nativas de los Valles Calchaquíes (Tucumán, Argentina)

inferred← citeshttps://doi.org/10.3114/fuse.2024.13.11openalex-snapshot

Fungal Planet description sheets: 1614???1696

inferred← citeshttps://doi.org/10.3114/fuse.2024.14.19openalex-snapshot

Fungal Planet description sheets: 1697?1780

inferred← citeshttps://doi.org/10.31428/10317/9723openalex-snapshot

The importance of autochthonous microbial communities in the sustainability of vegetation for the phytomanagement of semiarid mine tailings

inferred← citeshttps://doi.org/10.3389/fcimb.2023.1252482openalex-snapshot

Exploring diversity rock-inhabiting fungi from northern Thailand: a new genus and three new species belonged to the family Herpotrichiellaceae

inferred← citeshttps://doi.org/10.3389/fevo.2021.633155openalex-snapshot

The Utility of Macroecological Rules for Microbial Biogeography

inferred← citeshttps://doi.org/10.3389/ffunb.2022.805225openalex-snapshot

Precipitation, Not Land Use, Primarily Determines the Composition of Both Plant and Phyllosphere Fungal Communities

inferred← citeshttps://doi.org/10.3389/fmicb.2017.01645openalex-snapshot

Seed and Root Endophytic Fungi in a Range Expanding and a Related Plant Species

inferred← citeshttps://doi.org/10.3389/fmicb.2018.01847openalex-snapshot

Fungi Indirectly Affect Plant Root Architecture by Modulating Soil Volatile Organic Compounds

inferred← citeshttps://doi.org/10.3389/fmicb.2018.02462openalex-snapshot

Fungal Endophytic Communities of Two Wild Rosa Varieties With Different Powdery Mildew Susceptibilities

inferred← citeshttps://doi.org/10.3389/fmicb.2019.01437openalex-snapshot

Orchard Conditions and Fruiting Body Characteristics Drive the Microbiome of the Black Truffle Tuber aestivum

inferred← citeshttps://doi.org/10.3389/fmicb.2019.02565openalex-snapshot

Root-Colonizing Endophytic Fungi of the Dominant Grass Stipa krylovii From a Mongolian Steppe Grassland

inferred← citeshttps://doi.org/10.3389/fmicb.2019.02919openalex-snapshot

Tissue-Specific and Geographical Variation in Endophytic Fungi of Ageratina adenophora and Fungal Associations With the Environment

inferred← citeshttps://doi.org/10.3389/fmicb.2019.03105openalex-snapshot

Community Assembly of Endophytic Fungi in Ectomycorrhizae of Betulaceae Plants at a Regional Scale

inferred← citeshttps://doi.org/10.3389/fmicb.2019.03135openalex-snapshot

Rhizobium Inoculation Drives the Shifting of Rhizosphere Fungal Community in a Host Genotype Dependent Manner

inferred← citeshttps://doi.org/10.3389/fmicb.2020.00992openalex-snapshot

Biological Control of Plant-Parasitic Nematodes by Filamentous Fungi Inducers of Resistance: Trichoderma, Mycorrhizal and Endophytic Fungi

inferred← citeshttps://doi.org/10.3389/fmicb.2020.01519openalex-snapshot

Fungal Endophyte Communities of Crucifer Crops Are Seasonally Dynamic and Structured by Plant Identity, Plant Tissue and Environmental Factors

inferred← citeshttps://doi.org/10.3389/fmicb.2021.679729openalex-snapshot

Disruption of Traditional Grazing and Fire Regimes Shape the Fungal Endophyte Assemblages of the Tall-Grass Brachypodium rupestre

inferred← citeshttps://doi.org/10.3389/fmicb.2021.737616openalex-snapshot

Seed-Transmitted Bacteria and Fungi Dominate Juvenile Plant Microbiomes

inferred← citeshttps://doi.org/10.3389/fmicb.2022.868081openalex-snapshot

Symbiotic Modulation as a Driver of Niche Expansion of Coastal Plants in the San Juan Archipelago of Washington State

inferred← citeshttps://doi.org/10.3389/fmicb.2024.1466613openalex-snapshot

Distribution and diversity of cultured endophytic fungi in Gentiana straminea Maxim. at different altitudes on the northeastern Qinghai-Tibetan Plateau

inferred← citeshttps://doi.org/10.3389/fpls.2022.932288openalex-snapshot

Fungal endophytes of Brassicaceae: Molecular interactions and crop benefits

inferred← citeshttps://doi.org/10.3389/fpls.2024.1374228openalex-snapshot

Factors affecting the production of sugarcane yield and sucrose accumulation: suggested potential biological solutions

inferred← citeshttps://doi.org/10.3390/agriculture10060205openalex-snapshot

Endophytism of Lecanicillium and Akanthomyces

inferred← citeshttps://doi.org/10.3390/agriculture10120643openalex-snapshot

A Survey of Endophytic Fungi Associated with High-Risk Plants Imported for Ornamental Purposes

inferred← citeshttps://doi.org/10.3390/d16080453openalex-snapshot

Diversity of Endophytic Fungi and Bacteria Inhabiting the Roots of the Woodland Grass, Festuca gigantea (Poaceae)

inferred← citeshttps://doi.org/10.3390/jof10100679openalex-snapshot

Environmental Factors Drive the Biogeographic Pattern of Hippophae rhamnoides Root Endophytic Fungal Diversity in the Arid Regions of Northwest China

inferred← citeshttps://doi.org/10.3390/jof11020113openalex-snapshot

Composition and Biodiversity of Culturable Endophytic Fungi in the Roots of Alpine Medicinal Plants in Xinjiang, China

inferred← citeshttps://doi.org/10.3390/microorganisms11061406openalex-snapshot

Beneficial Effect of the New Leptodophora sp. Strain on Development of Blueberry Microclones in the Process of Their Adaptation

inferred← citeshttps://doi.org/10.3390/microorganisms13040799openalex-snapshot

Identifying Root-Associated Endophytic Fungi and Bacteria in Festuca and Lolium Grasses from a Site in Lithuania

inferred← citeshttps://doi.org/10.3767/persoonia.2021.46.11openalex-snapshot

Fungal Planet description sheets: 1182–1283

inferred← citeshttps://doi.org/10.3767/persoonia.2023.48.08openalex-snapshot

Fungal Planet description sheets: 1383-1435.

inferred← citeshttps://doi.org/10.3767/persoonia.2023.51.08openalex-snapshot

Fungal Planet description sheets: 1550–1613

inferred← citeshttps://doi.org/10.3897/mycokeys.20.11265openalex-snapshot

What do we learn from cultures in the omics age? High-throughput sequencing and cultivation of leaf-inhabiting endophytes from beech (Fagus sylvatica L.) revealed complementary community composition but similar correlations with local habitat conditions

inferred← citeshttps://doi.org/10.4102/koedoe.v62i2.1597openalex-snapshot

Fungal community structure variability between the root rhizosphere and endosphere in a granite catena system in Kruger National Park, South Africa

inferred← citeshttps://doi.org/10.5598/imafungus.2018.09.01.11openalex-snapshot

Ten reasons why a sequence-based nomenclature is not useful for fungi anytime soon

inferred← citeshttps://doi.org/10.64898/2026.09.28.754902openalex-snapshot

Global distributions and plant associations of the ecologically diverse ascomycete order Helotiales

inferred← citeshttps://doi.org/10.70675/8592dc74z9f4dz41cbz82b6z437ddf5a2901openalex-snapshot

Rôle du microbiote racinaire dans la nutrition phosphorée des plantes non-mycorhiziennes

inferred← citeshttps://doi.org/10.7287/peerj.15361v0.1/reviews/1openalex-snapshot

Peer Review #1 of "Microbial diversity patterns in the root zone of two Meconopsis plants on the Qinghai-Tibet Plateau (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.15361v0.1/reviews/2openalex-snapshot

Peer Review #2 of "Microbial diversity patterns in the root zone of two Meconopsis plants on the Qinghai-Tibet Plateau (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.15361v0.2/reviews/1openalex-snapshot

Peer Review #1 of "Microbial diversity patterns in the root zone of two Meconopsis plants on the Qinghai-Tibet Plateau (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.15361v0.2/reviews/2openalex-snapshot

Peer Review #2 of "Microbial diversity patterns in the root zone of two Meconopsis plants on the Qinghai-Tibet Plateau (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.7463v0.1/reviews/1openalex-snapshot

Peer Review #1 of "Plant host and drought shape the root associated fungal microbiota in rice (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.7463v0.1/reviews/2openalex-snapshot

Peer Review #2 of "Plant host and drought shape the root associated fungal microbiota in rice (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.7463v0.2/reviews/1openalex-snapshot

Peer Review #1 of "Plant host and drought shape the root associated fungal microbiota in rice (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.7463v0.2/reviews/2openalex-snapshot

Peer Review #2 of "Plant host and drought shape the root associated fungal microbiota in rice (v0.2)"

inferred← citeshttps://doi.org/10.7717/peerj.15361openalex-snapshot

Microbial diversity patterns in the root zone of two Meconopsis plants on the Qinghai-Tibet Plateau

inferred← citeshttps://doi.org/10.7717/peerj.6030openalex-snapshot

Structural plasticity in root-fungal symbioses: diverse interactions lead to improved plant fitness

inferred← citeshttps://doi.org/10.7717/peerj.7463openalex-snapshot

Plant host and drought shape the root associated fungal microbiota in rice

inferred← citeshttps://doi.org/10.9734/cjast/2021/v40i2931536openalex-snapshot

Endophytic Fungi as Potential Bio-Control Agents against Root Knot Nematode, Meloidogyne incognita in Banana

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.