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Developmental and comparative transcriptomic identification of iridophore contribution to white barring in clownfish
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/aja.1002030302openalex-snapshot
Stages of embryonic development of the zebrafish
inferredcites →https://doi.org/10.1002/dvdy.10334openalex-snapshot
Pigment cell organization in the hypodermis of zebrafish
inferredcites →https://doi.org/10.1002/dvdy.22743openalex-snapshot
Embryonic expression of zebrafish MiT family genes tfe3b, tfeb, and tfec
inferredcites →https://doi.org/10.1007/bf00221751openalex-snapshot
Evidence that mineralized spherules are involved in the formation of the superficial layer of the elasmoid scale in cichlids Cichlasoma octofasciatum and Hemichromis bimaculatus (Pisces, Teleostei): an epidermal active participation?
inferredcites →https://doi.org/10.1016/j.cub.2014.11.013openalex-snapshot
Zebrafish Stripes as a Model for Vertebrate Colour Pattern Formation
inferredcites →https://doi.org/10.1016/j.tig.2014.11.005openalex-snapshot
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inferredcites →https://doi.org/10.1016/s0074-7696(08)61876-8openalex-snapshot
Cytophysiology of Fish Chromatophores
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A Simple, Highly Visual in Vivo Screen for Anaplastic Lymphoma Kinase Inhibitors
inferredcites →https://doi.org/10.1038/nbt.1883openalex-snapshot
Full-length transcriptome assembly from RNA-Seq data without a reference genome
inferredcites →https://doi.org/10.1038/ncomms6149openalex-snapshot
The evolution of cichlid fish egg-spots is linked with a cis-regulatory change
inferredcites →https://doi.org/10.1038/nmeth.3317openalex-snapshot
HISAT: a fast spliced aligner with low memory requirements
inferredcites →https://doi.org/10.1038/nmeth.3360openalex-snapshot
Rapid reverse genetic screening using CRISPR in zebrafish
inferredcites →https://doi.org/10.1038/sj.embor.7400757openalex-snapshot
Spot pattern of leopard Danio is caused by mutation in the zebrafish connexin41.8 gene
inferredcites →https://doi.org/10.1038/srep29946openalex-snapshot
Additive reductions in zebrafish PRPS1 activity result in a spectrum of deficiencies modeling several human PRPS1-associated diseases
inferredcites →https://doi.org/10.1073/pnas.0506580102openalex-snapshot
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
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Identification of NVP-TAE684, a potent, selective, and efficacious inhibitor of NPM-ALK
inferredcites →https://doi.org/10.1073/pnas.0808622106openalex-snapshot
Interactions between zebrafish pigment cells responsible for the generation of Turing patterns
inferredcites →https://doi.org/10.1073/pnas.1311254111openalex-snapshot
Leucophores are similar to xanthophores in their specification and differentiation processes in medaka
inferredcites →https://doi.org/10.1073/pnas.1719137115openalex-snapshot
ALKALs are in vivo ligands for ALK family receptor tyrosine kinases in the neural crest and derived cells
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/bts611openalex-snapshot
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
inferredcites →https://doi.org/10.1093/sysbio/syr041openalex-snapshot
Survey of Branch Support Methods Demonstrates Accuracy, Power, and Robustness of Fast Likelihood-based Approximation Schemes
inferredcites →https://doi.org/10.1101/165217openalex-snapshot
Revelation of the Genetic Basis for Convergent Innovative Anal Fin Pigmentation Patterns in Cichlid Fishes
inferredcites →https://doi.org/10.1111/j.1742-4658.2010.07897.xopenalex-snapshot
Structural and functional studies of the human phosphoribosyltransferase domain containing protein 1
inferredcites →https://doi.org/10.1111/j.1755-148x.2012.00977.xopenalex-snapshot
Small molecule screening identifies targetable zebrafish pigmentation pathways
inferredcites →https://doi.org/10.1111/joa.12373openalex-snapshot
Comparison of pigment cell ultrastructure and organisation in the dermis of marble trout and brown trout, and first description of erythrophore ultrastructure in salmonids
inferredcites →https://doi.org/10.1111/pcmr.12409openalex-snapshot
What is a vertebrate pigment cell?
inferredcites →https://doi.org/10.1111/pcmr.12454openalex-snapshot
Zebrafish Leucocyte tyrosine kinase controls iridophore establishment, proliferation and survival
inferredcites →https://doi.org/10.1126/science.1256251openalex-snapshot
Thyroid hormone–dependent adult pigment cell lineage and pattern in zebrafish
inferredcites →https://doi.org/10.1126/science.aal2745openalex-snapshot
A macrophage relay for long-distance signaling during postembryonic tissue remodeling
inferredcites →https://doi.org/10.1186/s12915-018-0559-7openalex-snapshot
Ontogenetic and phylogenetic simplification during white stripe evolution in clownfishes
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1242/dev.096719openalex-snapshot
Iridophores and their interactions with other chromatophores are required for stripe formation in zebrafish
inferredcites →https://doi.org/10.1242/dev.119.4.1203openalex-snapshot
Structure of the zebrafish snail1 gene and its expression in wild-type, spadetail and no tail mutant embryos
inferredcites →https://doi.org/10.12688/f1000research.7563.1openalex-snapshot
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences
inferredcites →https://doi.org/10.1371/journal.pgen.1000026openalex-snapshot
Leukocyte Tyrosine Kinase Functions in Pigment Cell Development
inferredcites →https://doi.org/10.1371/journal.pgen.1003561openalex-snapshot
Interactions with Iridophores and the Tissue Environment Required for Patterning Melanophores and Xanthophores during Zebrafish Adult Pigment Stripe Formation
inferredcites →https://doi.org/10.1371/journal.pgen.1004246openalex-snapshot
Sox5 Functions as a Fate Switch in Medaka Pigment Cell Development
inferredcites →https://doi.org/10.1371/journal.pgen.1007260openalex-snapshot
Distinct interactions of Sox5 and Sox10 in fate specification of pigment cells in medaka and zebrafish
inferredcites →https://doi.org/10.1371/journal.pgen.1007402openalex-snapshot
A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest
inferredcites →https://doi.org/10.1371/journal.pone.0067801openalex-snapshot
Gene Expression Analysis of Zebrafish Melanocytes, Iridophores, and Retinal Pigmented Epithelium Reveals Indicators of Biological Function and Developmental Origin
inferredcites →https://doi.org/10.1534/g3.117.040675openalex-snapshot
pnp4aIs the Causal Gene of the Medaka Iridophore Mutantguanineless
inferredcites →https://doi.org/10.1534/g3.118.200201openalex-snapshot
Teleost Fish-Specific Preferential Retention of Pigmentation Gene-Containing Families After Whole Genome Duplications in Vertebrates
inferredcites →https://doi.org/10.7554/elife.05125openalex-snapshot
Gap junctions composed of connexins 41.8 and 39.4 are essential for colour pattern formation in zebrafish
inferredcites →https://doi.org/10.7554/elife.12401openalex-snapshot
Long-distance communication by specialized cellular projections during pigment pattern development and evolution
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.741550openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.celrep.2023.112661openalex-snapshot
The multi-level regulation of clownfish metamorphosis by thyroid hormones
inferred← citeshttps://doi.org/10.1016/j.gde.2019.07.002openalex-snapshot
The identification of genes involved in the evolution of color patterns in fish
inferred← citeshttps://doi.org/10.1016/j.gde.2020.05.010openalex-snapshot
Linking genotype, cell behavior, and phenotype: multidisciplinary perspectives with a basis in zebrafish patterns
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inferred← citeshttps://doi.org/10.1016/j.isci.2024.111490openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.mce.2025.112535openalex-snapshot
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Creation of colorless transparent tilapia using CRISPR/Cas9 mediated multi-gene mutation
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Artificial insemination techniques and molecular insights into iridophore development in the ornamental fish bitterling (Rhodeus ocellatus)
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Cell-cell communication as underlying principle governing color pattern formation in teleost fishes
inferred← citeshttps://doi.org/10.1038/s41589-025-02020-0openalex-snapshot
pH variations enable guanine crystal formation within iridosomes
inferred← citeshttps://doi.org/10.1038/s41598-020-69239-wopenalex-snapshot
Neural innervation as a potential trigger of morphological color change and sexual dimorphism in cichlid fish
inferred← citeshttps://doi.org/10.1073/pnas.1901021116openalex-snapshot
Fate plasticity and reprogramming in genetically distinct populations of Danio leucophores
inferred← citeshttps://doi.org/10.1073/pnas.2101634118openalex-snapshot
Thyroid hormones regulate the formation and environmental plasticity of white bars in clownfishes
inferred← citeshttps://doi.org/10.1073/pnas.2424180122openalex-snapshot
Agouti and BMP signaling drive a naturally occurring fate conversion of melanophores to leucophores in zebrafish
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Lysosome-related organelles orchestrate guanine crystal formation in pigment cells
inferred← citeshttps://doi.org/10.1073/pnas.2537571123openalex-snapshot
Cell type diversification and phenotype convergence underlying white fin-ornamentation of cyprinid fishes
inferred← citeshttps://doi.org/10.1093/beheco/arac089openalex-snapshot
Higher ultraviolet skin reflectance signals submissiveness in the anemonefish, Amphiprion akindynos
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Replicate avian hybrid zones reveal the progression of genetic and trait introgression through time
inferred← citeshttps://doi.org/10.1093/jhered/esaa008openalex-snapshot
The Estrogen-Responsive Transcriptome of Female Secondary Sexual Traits in the Gulf Pipefish
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Expression levels of the tetratricopeptide repeat protein gene ttc39b covary with carotenoid-based skin colour in cichlid fish
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CRISPR/Cas9-mediated generation of biallelic G0 anemonefish ( Amphiprion ocellaris ) mutants
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Genetic basis of aposematic coloration in a mimetic radiation of poison frogs
inferred← citeshttps://doi.org/10.1101/2023.10.19.563036openalex-snapshot
Gene flow throughout the evolutionary history of a polymorphic and generalist clownfish
inferred← citeshttps://doi.org/10.1101/2024.07.20.604036openalex-snapshot
Controlled pH Alteration Enables Guanine Accumulation and Drives Crystallization within Iridosomes
inferred← citeshttps://doi.org/10.1101/2025.03.14.643259openalex-snapshot
Genetic basis of the evolution of vertical bars in clownfishes
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ttc39bl, one of the two duplicated paralogs of the tetratricopeptide repeat domain 39B gene, is essential for carotenoid coloration in medaka (Oryzias latipes) and is the gene responsible for the r locus
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Socially regulated developmental plasticity in the color pattern of an anemonefish
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Establishment of culture and microinjection methods for false clownfish embryos without parental care
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Plasticity Associated with Adoption of Social Roles in Clown Anemonefish
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Plasticity Associated with Adoption of Social Roles in Clown Anemonefish
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Development and genetics of red coloration in the zebrafish relative Danio albolineatus
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