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Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/bf00818163openalex-snapshot
Fast folding and comparison of RNA secondary structures
inferredcites →https://doi.org/10.1007/bf02101990openalex-snapshot
A new method for calculating evolutionary substitution rates
inferredcites →https://doi.org/10.1007/bf02834980openalex-snapshot
Molecular structure of nucleic acids
inferredcites →https://doi.org/10.1016/0022-2836(70)90057-4openalex-snapshot
A general method applicable to the search for similarities in the amino acid sequence of two proteins
inferredcites →https://doi.org/10.1016/s0022-2836(02)00308-xopenalex-snapshot
Secondary Structure Prediction for Aligned RNA Sequences
inferredcites →https://doi.org/10.1016/s0168-9525(03)00118-5openalex-snapshot
ITS2 is a double-edged tool for eukaryote evolutionary comparisons
inferredcites →https://doi.org/10.1016/s1055-7903(03)00094-0openalex-snapshot
ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae
inferredcites →https://doi.org/10.1016/s1055-7903(03)00208-2openalex-snapshot
Ribosomal ITS sequences and plant phylogenetic inference
inferredcites →https://doi.org/10.1038/171737a0openalex-snapshot
Molecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic Acid
inferredcites →https://doi.org/10.1073/pnas.77.11.6309openalex-snapshot
Fast algorithm for predicting the secondary structure of single-stranded RNA.
inferredcites →https://doi.org/10.1089/10665270050514918openalex-snapshot
Modeling Amino Acid Replacement
inferredcites →https://doi.org/10.1093/nar/22.11.2079openalex-snapshot
RNA sequence analysis using covariance models
inferredcites →https://doi.org/10.1093/nar/9.1.133openalex-snapshot
Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
inferredcites →https://doi.org/10.1093/nar/gkf481openalex-snapshot
The non-Watson-Crick base pairs and their associated isostericity matrices
inferredcites →https://doi.org/10.1261/rna.7204505openalex-snapshot
A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Molecular phylogenetics of species of Bulbophyllum sect. Trias (Orchidaceae; Epidendroideae; Malaxidae) based on nrITS and plastid rbcL and matK
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Evolutionary Diversification Indicated by Compensatory Base Changes in ITS2 Secondary Structures in a Complex Fungal Species, Rhizoctonia solani
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Structural Characterization of the Internal Transcribed Spacer 2 (ITS2) of the Ribosomal DNA (rDNA) Cluster in Calyptratae (Diptera: Schizophora) and its Implications for Molecular Phylogenetic Analyses
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Efficacy of DNA barcode internal transcribed spacer 2 (ITS 2) in phylogenetic study of Alpinia species from Peninsular Malaysia
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Molecular phylogenetic hypotheses of Zoanthus species (Anthozoa:Hexacorallia) using RNA secondary structure of the internal transcribed spacer 2 (ITS2)
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Molecular Characterization and Antimicrobial Activity of an Endolichenic Fungus, Aspergillus sp. Isolated from Parmelia caperata of Similipal Biosphere Reserve, India
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Molecular characterization of the Indian poultry nodular tapeworm, Raillietina echinobothrida (Cestoda: Cyclophyllidea: Davaineidae) based on rDNA internal transcribed spacer 2 region
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Using compensatory base change analysis of internal transcribed spacer 2 secondary structures to identify three new species in Paramacrobiotus (Tardigrada)
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Secondary structure prediction of ITS rRNA region and molecular phylogeny: an integrated approach for the precise speciation of Muscodor species
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Exdiff: a modular and explainable framework combining network simulation and graph neural networks for diffusion modelling
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Secondary structure of the internal transcribed rDNA (ITS) regions of Cosmopolites sordidus (Germar) and Odoiporus longicollis (Olivier): a first report in family Curculionidae
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Characterization and classification of highly productive microalgae strains discovered for biofuel and bioproduct generation
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Molecular phylogeny of Botryococcus braunii strains (race A) – An integrative approach
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Using the ITS2 sequence-structure as a DNA mini-barcode: A case study in authenticating the traditional medicine“Fang Feng”
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Phylogenetic implications and secondary structure analyses of Vigna mungo (L.) Hepper genotypes based on nrDNA ITS2 sequences
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Support for the coevolution of Neoparamoeba and their endosymbionts, Perkinsela amoebae-like organisms
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18S rRNA gene sequence-structure phylogeny of the Trypanosomatida (Kinetoplastea, Euglenozoa) with special reference to Trypanosoma
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18S and ITS2 rRNA gene sequence-structure phylogeny of the Phaeophyceae (SAR, Stramenopiles) with special reference to Laminariales
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Evolution of rDNA ITS1 and ITS2 sequences and RNA secondary structures within members of the fungal genera Grosmannia and Leptographium
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Phylogenetic relationships between Sedum L. and related genera (Crassulaceae) based on ITS rDNA sequence comparisons
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When the ribosomal DNA does not tell the truth: The case of the taxonomic position of Kurtia argillacea, an ericoid mycorrhizal fungus residing among Hymenochaetales
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5.8S-28S rRNA interaction and HMM-based ITS2 annotation
inferred← citeshttps://doi.org/10.1016/j.gene.2014.05.065openalex-snapshot
ITS2, 18S, 16S or any other RNA — simply aligning sequences and their individual secondary structures simultaneously by an automatic approach
inferred← citeshttps://doi.org/10.1016/j.gene.2014.12.042openalex-snapshot
Internal transcribed spacer (ITS) evolution in populations of the hyperparasitic European mistletoe pathogen fungus, Sphaeropsis visci (Botryosphaeriaceae): The utility of ITS2 secondary structures
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Genetic structure of Pseudo-nitzschia pungens (Bacillariophyceae) populations: Implications of a global diversification of the diatom
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A bloom of Karlodinium australe (Gymnodiniales, Dinophyceae) associated with mass mortality of cage-cultured fishes in West Johor Strait, Malaysia
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New scenario for speciation in the benthic dinoflagellate genus Coolia (Dinophyceae)
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Pseudo-nitzschia simulans sp. nov. (Bacillariophyceae), the first domoic acid producer from Chinese waters
inferred← citeshttps://doi.org/10.1016/j.hal.2017.07.002openalex-snapshot
Taxonomic assignment of the benthic toxigenic dinoflagellate Gambierdiscus sp. type 6 as Gambierdiscus balechii (Dinophyceae), including its distribution and ciguatoxicity
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An evaluation of the genus Amphidinium (Dinophyceae) combining evidence from morphology, phylogenetics, and toxin production, with the introduction of six novel species
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Identification of Azadinium species and a new azaspiracid from Azadinium poporum in Puget Sound, Washington State, USA
inferred← citeshttps://doi.org/10.1016/j.hal.2019.01.007openalex-snapshot
Taxonomy and toxicity of Prorocentrum from Perhentian Islands (Malaysia), with a description of a non-toxigenic species Prorocentrum malayense sp. nov. (Dinophyceae)
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Species composition and toxicity of the genus Pseudo-nitzschia in Taiwan Strait, including P. chiniana sp. nov. and P. qiana sp. nov.
inferred← citeshttps://doi.org/10.1016/j.hal.2022.102338openalex-snapshot
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Diagnosis and characterization of the ribosomal DNA-ITS of potato rot nematode (Ditylenchus destructor) populations from Chinese medicinal herbs
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Evolutionary dynamics of Ceratonova species (Cnidaria: Myxozoa) reveal different host adaptation strategies
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Secondary structure of ITS2 rRNA provides taxonomic characters for systematic studies — a case in Lycoperdaceae (Basidiomycota)
inferred← citeshttps://doi.org/10.1016/j.nbt.2011.10.009openalex-snapshot
Fatty acid profiling and molecular characterization of some freshwater microalgae from India with potential for biodiesel production
inferred← citeshttps://doi.org/10.1016/j.ode.2007.09.001openalex-snapshot
ITS2 secondary structure and phylogeny of cyst-forming nematodes of the genus Heterodera (Tylenchida: Heteroderidae)
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Morphological and molecular appraisal of cyclophyllidean cestoda parasite Raillietina saudiae sp. nov. infecting the domestic pigeon Columba livia domestica and its role as a bio-indicator for environmental quality
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ITS2 and 18S rDNA sequence-structure phylogeny of Chlorella and allies (Chlorophyta, Trebouxiophyceae, Chlorellaceae)
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Analysis of the Internal Transcribed Spacer 2 (ITS2) Region of Scuticociliates and Related Taxa (Ciliophora, Oligohymenophorea) to Infer their Evolution and Phylogeny
inferred← citeshttps://doi.org/10.1016/j.protis.2009.10.003openalex-snapshot
Microevolution and Speciation in Thalassiosira weissflogii (Bacillariophyta)
inferred← citeshttps://doi.org/10.1016/j.protis.2011.06.008openalex-snapshot
Genetic Heterogeneity in Internal Transcribed Spacer Genes of Balantidium coli (Litostomatea, Ciliophora)
inferred← citeshttps://doi.org/10.1016/j.toxicon.2021.09.018openalex-snapshot
Toxic bloom of Pseudo-nitzschia cuspidata (Bacillariophyceae) and domoic acid contamination of bivalve molluscs in Malaysia Borneo
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.01.013openalex-snapshot
Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plants
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.07.019openalex-snapshot
Phylogenetic analysis of the internal transcribed spacer (ITS) region in Menyanthaceae using predicted secondary structure
inferred← citeshttps://doi.org/10.1016/j.ympev.2009.01.008openalex-snapshot
ITS2 sequence–structure analysis in phylogenetics: A how-to manual for molecular systematics
inferred← citeshttps://doi.org/10.1016/j.ympev.2009.07.036openalex-snapshot
Compensatory base changes illuminate morphologically difficult taxonomy
inferred← citeshttps://doi.org/10.1016/j.ympev.2009.11.020openalex-snapshot
High nrDNA ITS polymorphism in the ancient extant seed plant Cycas: Incomplete concerted evolution and the origin of pseudogenes
inferred← citeshttps://doi.org/10.1016/j.ympev.2010.02.030openalex-snapshot
Analysis of the secondary structure of ITS transcripts in peritrich ciliates (Ciliophora, Oligohymenophorea): Implications for structural evolution and phylogenetic reconstruction
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.01.026openalex-snapshot
ITS2 Database IV: Interactive taxon sampling for internal transcribed spacer 2 based phylogenies
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.06.024openalex-snapshot
Genealogical analyses of multiple loci of litostomatean ciliates (Protista, Ciliophora, Litostomatea)
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.07.017openalex-snapshot
Molecular phylogenetics in 2D: ITS2 rRNA evolution and sequence-structure barcode from Veneridae to Bivalvia
inferred← citeshttps://doi.org/10.1016/j.ympev.2013.01.018openalex-snapshot
Evaluation of the authenticity of a highly novel environmental sequence from boreal forest soil using ribosomal RNA secondary structure modeling
inferred← citeshttps://doi.org/10.1016/j.ympev.2014.06.015openalex-snapshot
Gorgonia mariae and Antillogorgia bipinnata populations inferred from compensatory base change analysis of the internal transcribed spacer 2
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.05.041openalex-snapshot
Molecular phylogeny and species delimitation within the ciliate genus Spirostomum (Ciliophora, Postciliodesmatophora, Heterotrichea), using the internal transcribed spacer region
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.08.014openalex-snapshot
A consensus secondary structure of ITS2 for the diatom Order Cymatosirales (Mediophyceae, Bacillariophyta) and reappraisal of the order based on DNA, morphology, and reproduction
inferred← citeshttps://doi.org/10.1017/s1479262121000393openalex-snapshot
Molecular identification and phylogenetics of local pearl millet cultivars using internal-transcribed spacers of nuclear ribosomal DNA
inferred← citeshttps://doi.org/10.1038/s41598-020-59524-zopenalex-snapshot
Cryptic species in the parasitic Amoebophrya species complex revealed by a polyphasic approach
inferred← citeshttps://doi.org/10.1038/s41598-020-67547-9openalex-snapshot
Sexual reproduction and genetic polymorphism within the cosmopolitan marine diatom Pseudo-nitzschia pungens
inferred← citeshttps://doi.org/10.1038/s41598-023-30034-yopenalex-snapshot
Successful identification of the species of the semipetrified amber medicinal resin benzoin using molecular diagnostic technology
inferred← citeshttps://doi.org/10.1055/s-2006-924560openalex-snapshot
Morphology and nrITS Phylogeny of the Genus Pinguicula L. (Lentibulariaceae), with Special Attention to Embryo Evolution
inferred← citeshttps://doi.org/10.1080/00275514.2017.1303861openalex-snapshot
Geosmithiaassociated with bark beetles and woodborers in the western USA: taxonomic diversity and vector specificity
inferred← citeshttps://doi.org/10.1080/0269249x.2024.2401968openalex-snapshot
Morphological and molecular characterization of two potentially toxigenic species of the genus Pseudo-nitzschia (Bacillariophyceae) in Luzon Island, Philippines
inferred← citeshttps://doi.org/10.1080/07391102.2015.1056550openalex-snapshot
Prediction of potential barcoding sites on ITS1 by wavelet transform
inferred← citeshttps://doi.org/10.1080/09670262.2013.830344openalex-snapshot
The blood alga: phylogeny ofHaematococcus(Chlorophyceae) inferred from ribosomal RNA gene sequence data
inferred← citeshttps://doi.org/10.1080/09670262.2018.1475015openalex-snapshot
Species distinctions among closely related strains of Eustigmatophyceae (Stramenopiles) emphasizing ITS2 sequence-structure data: Eustigmatos and Vischeria
inferred← citeshttps://doi.org/10.1080/09670262.2018.1558286openalex-snapshot
Desmodesmus tropicus (Chlorophyta) in the Danube Delta – reassessing the phylogeny of the series Maximi
inferred← citeshttps://doi.org/10.1080/09670262.2019.1618920openalex-snapshot
Coccomyxa cimbricasp. nov., a green microalga found in association with carnivorous plants of the genusDroseraL.
inferred← citeshttps://doi.org/10.1080/09670262.2024.2338510openalex-snapshot
Desmodesmus pseudoperforatus sp. nov., a giant in Desmodesmus , series Maximi
inferred← citeshttps://doi.org/10.1080/14772000.2015.1102172openalex-snapshot
Molecular taxonomy of Hyrcanian Alnus using nuclear ribosomal ITS and chloroplast trnH-psbA DNA barcode markers
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Phylogeny of Oedogoniales, Chaetophorales and Chaetopeltidales (Chlorophyceae): inferences from sequence-structure analysis of ITS2
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New insights into ribosomal DNA variation in apomictic and sexualTaraxacum(Asteraceae)
inferred← citeshttps://doi.org/10.1093/femsec/fiw122openalex-snapshot
Widespread green algae Chlorella and Stichococcus exhibit polar-temperate and tropical-temperate biogeography
inferred← citeshttps://doi.org/10.1093/molbev/msv174openalex-snapshot
ITS2 Database V: Twice as Much: Table 1.
inferred← citeshttps://doi.org/10.1093/nar/gkl129openalex-snapshot
The internal transcribed spacer 2 database--a web server for (not only) low level phylogenetic analyses
inferred← citeshttps://doi.org/10.1093/nar/gkm233openalex-snapshot
Pan-eukaryote ITS2 homologies revealed by RNA secondary structure
inferred← citeshttps://doi.org/10.1093/nar/gkm827openalex-snapshot
The ITS2 Database II: homology modelling RNA structure for molecular systematics
inferred← citeshttps://doi.org/10.1093/plankt/fbv065openalex-snapshot
Molecular evidence for wide vertical distribution of the marine planktonic protistLarcopyle buetschlii(Radiolaria) in a semi-enclosed marginal sea
inferred← citeshttps://doi.org/10.1109/icnc.2009.68openalex-snapshot
Quantum-Inspired Evolutionary Algorithm for RNA Multiple Sequence-Structure Alignment
inferred← citeshttps://doi.org/10.1111/j.1438-8677.2012.00576.xopenalex-snapshot
‘Y’Scenedesmus (Chlorophyta, Chlorophyceae): the internal transcribed spacer 2 rRNA secondary structure re‐revisited
inferred← citeshttps://doi.org/10.1111/j.1755-0998.2008.02199.xopenalex-snapshot
Modelling cross‐hybridization on phylogenetic DNA microarrays increases the detection power of closely related species
inferred← citeshttps://doi.org/10.1111/jeu.12292openalex-snapshot
Characterization of a Strain ofFukuyoa paulensis(Dinophyceae) from the Western Mediterranean Sea
inferred← citeshttps://doi.org/10.1111/jeu.12959openalex-snapshot
18 S r DNA sequence–structure phylogeny of the Euglenophyceae (Euglenozoa, Euglenida)
inferred← citeshttps://doi.org/10.1111/jfd.13090openalex-snapshot
Saprolegnia molecular phylogeny among farmed teleosts in Nova Scotia, Canada
inferred← citeshttps://doi.org/10.1111/jpy.12313openalex-snapshot
A non‐toxigenic but morphologically and phylogenetically distinct new species ofPseudo‐nitzschia,P. sabitsp. nov. (Bacillariophyceae)
inferred← citeshttps://doi.org/10.1111/jpy.12395openalex-snapshot
Pseudo‐nitzschia arctica sp. nov., a new cold‐water cryptic Pseudo‐nitzschia species within the P. pseudodelicatissima complex
inferred← citeshttps://doi.org/10.1111/jpy.12448openalex-snapshot
High diversity of Pseudo‐nitzschia along the northern coast of Sarawak (Malaysian Borneo), with descriptions of P. bipertita sp. nov. and P. limii sp. nov. (Bacillariophyceae)
inferred← citeshttps://doi.org/10.1111/jpy.12489openalex-snapshot
Morphological and genetic diversity of Beaufort Sea diatoms with high contributions from the Chaetoceros neogracilis species complex
inferred← citeshttps://doi.org/10.1111/jpy.12620openalex-snapshot
Phylogeny and species delineation in the marine diatomPseudo‐nitzschia(Bacillariophyta) usingcox1, LSU , and ITS 2 rRNA genes: A perspective in character evolution
inferred← citeshttps://doi.org/10.1111/jpy.12991openalex-snapshot
Chlorocladiella gen. nov. (Pithophoraceae, Cladophorales, Chlorophyta), Including Four New Species From Various Freshwater Habitats in China
inferred← citeshttps://doi.org/10.1111/jpy.13101openalex-snapshot
Two New and Nontoxigenic Pseudo‐nitzschia species (Bacillariophyceae) from Chinese Southeast Coastal Waters
inferred← citeshttps://doi.org/10.1111/jpy.13183openalex-snapshot
A Molecular Analysis of Microalgae from Around the Globe to Revise Raphidonema (Trebouxiophyceae, Chlorophyta)
inferred← citeshttps://doi.org/10.1111/jpy.13354openalex-snapshot
“ DNA signaturing” database construction forTetradesmusspecies identification and phylogenetic relationships ofScenedesmus‐like green microalgae (Scenedesmaceae, Chlorophyta)
inferred← citeshttps://doi.org/10.1111/jpy.13438openalex-snapshot
Rosetta gen. nov. (Chlorophyta): Resolving the identity of red snow algal rosettes
inferred← citeshttps://doi.org/10.1111/jvec.12128openalex-snapshot
Phylogeny of anopheline (Diptera: Culicidae) species in southern Africa, based on nuclear and mitochondrial genes
inferred← citeshttps://doi.org/10.1111/lam.13400openalex-snapshot
Detection ofRaillietina saudiaefrom the domestic pigeon in Saudi Arabia through18Sand28S rDNAgenes
inferred← citeshttps://doi.org/10.1111/pre.12003openalex-snapshot
Phylogenetic analysis of ITS2 sequences suggests the taxonomic re‐structuring of D unaliella viridis( C hlorophyceae, D unaliellales)
inferred← citeshttps://doi.org/10.1111/zoj.12455openalex-snapshot
Molecular taxonomy in 2D: a novel ITS2 rRNA sequence-structure approach guides the description of the oysters' subfamily Saccostreinae and the genus Magallana (Bivalvia: Ostreidae)
inferred← citeshttps://doi.org/10.1186/1471-2105-7-490openalex-snapshot
XML schemas for common bioinformatic data types and their application in workflow systems
inferred← citeshttps://doi.org/10.1186/1471-2105-7-498openalex-snapshot
4SALE – A tool for synchronous RNA sequence and secondary structure alignment and editing
inferred← citeshttps://doi.org/10.1186/1471-2105-8-271openalex-snapshot
Accurate multiple sequence-structure alignment of RNA sequences using combinatorial optimization
inferred← citeshttps://doi.org/10.1186/1471-2105-9-122openalex-snapshot
Strategies for measuring evolutionary conservation of RNA secondary structures
inferred← citeshttps://doi.org/10.1186/1471-2105-9-219openalex-snapshot
ConStruct: Improved construction of RNA consensus structures
inferred← citeshttps://doi.org/10.1186/1471-2148-11-262openalex-snapshot
A close-up view on ITS2 evolution and speciation - a case study in the Ulvophyceae (Chlorophyta, Viridiplantae)
inferred← citeshttps://doi.org/10.1186/1471-2148-13-39openalex-snapshot
Congruence of chloroplast- and nuclear-encoded DNA sequence variations used to assess species boundaries in the soil microalga Heterococcus(Stramenopiles, Xanthophyceae)
inferred← citeshttps://doi.org/10.1186/1471-2148-8-218openalex-snapshot
ITS2 data corroborate a monophyletic chlorophycean DO-group (Sphaeropleales)
inferred← citeshttps://doi.org/10.1186/1471-2148-9-300openalex-snapshot
ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus )
inferred← citeshttps://doi.org/10.1186/1745-6150-5-4openalex-snapshot
Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees
inferred← citeshttps://doi.org/10.1186/1756-0500-3-320openalex-snapshot
A molecular phylogeny of Hypnales (Bryophyta) inferred from ITS2 sequence-structure data
inferred← citeshttps://doi.org/10.1186/2046-9063-8-2openalex-snapshot
Molecular taxonomy of Dunaliella (Chlorophyceae), with a special focus on D. salina: ITS2 sequences revisited with an extensive geographical sampling
inferred← citeshttps://doi.org/10.1186/s12859-021-04532-7openalex-snapshot
LaRA 2: parallel and vectorized program for sequence–structure alignment of RNA sequences
inferred← citeshttps://doi.org/10.1186/s13020-015-0062-9openalex-snapshot
Identification of Hippophae species (Shaji) through DNA barcodes
inferred← citeshttps://doi.org/10.1186/s13568-017-0494-yopenalex-snapshot
Taxonomic identification of the thermotolerant and fast-growing fungus Lichtheimia ramosa H71D and biochemical characterization of the thermophilic xylanase LrXynA
inferred← citeshttps://doi.org/10.1248/bpb.b14-00335openalex-snapshot
Genetic and Component Content Differentiation between Wild and Cultivated Populations of Paeonia lactiflora and Related Species Used as Chishao and Baishao in China
inferred← citeshttps://doi.org/10.12677/br.2014.31007openalex-snapshot
Application of nrDNA-ITS Sequences in Plant Phylogeny and Evolution
inferred← citeshttps://doi.org/10.1371/journal.pone.0016931openalex-snapshot
Internal Transcribed Spacer 2 (nu ITS2 rRNA) Sequence-Structure Phylogenetics: Towards an Automated Reconstruction of the Green Algal Tree of Life
inferred← citeshttps://doi.org/10.1371/journal.pone.0017863openalex-snapshot
The ITS1-5.8S-ITS2 Sequence Region in the Musaceae: Structure, Diversity and Use in Molecular Phylogeny
inferred← citeshttps://doi.org/10.1371/journal.pone.0043971openalex-snapshot
Extensive Pyrosequencing Reveals Frequent Intra-Genomic Variations of Internal Transcribed Spacer Regions of Nuclear Ribosomal DNA
inferred← citeshttps://doi.org/10.1371/journal.pone.0066726openalex-snapshot
Compensatory Base Changes in ITS2 Secondary Structures Correlate with the Biological Species Concept Despite Intragenomic Variability in ITS2 Sequences – A Proof of Concept
inferred← citeshttps://doi.org/10.1371/journal.pone.0091928openalex-snapshot
Internal Transcribed Spacer 1 Secondary Structure Analysis Reveals a Common Core throughout the Anaerobic Fungi (Neocallimastigomycota)
inferred← citeshttps://doi.org/10.1371/journal.pone.0094297openalex-snapshot
Deep-Sequencing Method for Quantifying Background Abundances of Symbiodinium Types: Exploring the Rare Symbiodinium Biosphere in Reef-Building Corals
inferred← citeshttps://doi.org/10.1371/journal.pone.0175662openalex-snapshot
Molecular phylogeny of Oncaeidae (Copepoda) using nuclear ribosomal internal transcribed spacer (ITS rDNA)
inferred← citeshttps://doi.org/10.1371/journal.pone.0181491openalex-snapshot
Assessing intragenomic variation of the internal transcribed spacer two: Adapting the Illumina metagenomics protocol
inferred← citeshttps://doi.org/10.1371/journal.pone.0231902openalex-snapshot
Phylogenetic relationships of Pseudo-nitzschia subpacifica (Bacillariophyceae) from the Mexican Pacific, and its production of domoic acid in culture
inferred← citeshttps://doi.org/10.14258/pbssm.2023116openalex-snapshot
Genetic inventory of rare and endemic plant species of the Baikal Region
inferred← citeshttps://doi.org/10.1603/008.102.0306openalex-snapshot
Insights Into Flea Beetle (Coleoptera: Chrysomelidae: Galerucinae) Host Specificity From Concordant Mitochondrial and Nuclear DNA Phylogenies
inferred← citeshttps://doi.org/10.21203/rs.3.rs-10565945/v1openalex-snapshot
Astragalus kharazmii (Fabaceae), a new species from Iran revealed by integrative taxonomy: evidence from morphology, micromorphology, molecular phylogeny, and historical biogeography
inferred← citeshttps://doi.org/10.21203/rs.3.rs-3936198/v1openalex-snapshot
Morphological and phylogenetic analysis of Raillietina sp. infecting domestic pigeons (Columba livia domestica).
inferred← citeshttps://doi.org/10.21608/jesp.2019.68050openalex-snapshot
DESCRIPTION OF CESTODES INFECTING DOMESTICATED PIGEON (COLUMBA LIVIA DOMESTICA) IN EGYPT WITH SPECIAL REFERENCE TO THE MOLECULAR CHARACTERIZATION OF RAILLIETINA SPP.
inferred← citeshttps://doi.org/10.2216/09-61.1openalex-snapshot
ITS2 sequence-structure phylogeny in the Scenedesmaceae with special reference toCoelastrum(Chlorophyta, Chlorophyceae), including the new generaComasiellaandPectinodesmus
inferred← citeshttps://doi.org/10.2216/11-18.1openalex-snapshot
A taxonomic revision of Chloromonas reticulata (Volvocales, Chlorophyceae), the type species of the genus Chloromonas, based on multigene phylogeny and comparative light and electron microscopy
inferred← citeshttps://doi.org/10.2216/15-015.1openalex-snapshot
Morphological diversity masks phylogenetic similarity ofEttliaandHaematococcus(Chlorophyceae)
inferred← citeshttps://doi.org/10.2216/15-78.1openalex-snapshot
18S rDNA phylogeny ofPseudo-nitzschia(Bacillariophyceae) inferred from sequence-structure information
inferred← citeshttps://doi.org/10.2216/16-33.1openalex-snapshot
Molecular phylogeny and morphological diversity of inland Cladophora (Cladophorales, Ulvophyceae) from China
inferred← citeshttps://doi.org/10.2216/16-71.1openalex-snapshot
THESES db: the algae 18S rDNA sequence–structure database for inferring phylogenies
inferred← citeshttps://doi.org/10.3109/13693786.2013.820001openalex-snapshot
Seborrheic dermatitis: predisposing factors and ITS2 secondary structure forMalasseziaphylogenic analysis
inferred← citeshttps://doi.org/10.3389/fmicb.2018.01193openalex-snapshot
Birth-and-Death Evolution and Reticulation of ITS Segments of Metschnikowia andauensis and Metschnikowia fructicola rDNA Repeats
inferred← citeshttps://doi.org/10.3389/fpls.2016.00467openalex-snapshot
The Chemical and Genetic Characteristics of Szechuan Pepper (Zanthoxylum bungeanum and Z. armatum) Cultivars and Their Suitable Habitat
inferred← citeshttps://doi.org/10.3389/fpls.2022.984579openalex-snapshot
Extensive nrDNA ITS polymorphism in Lycium: Non-concerted evolution and the identification of pseudogenes
inferred← citeshttps://doi.org/10.3390/genes14030697openalex-snapshot
DNA Barcoding, Phylogenetic Analysis and Secondary Structure Predictions of Nepenthes ampullaria, Nepenthes gracilis and Nepenthes rafflesiana
inferred← citeshttps://doi.org/10.3390/ijms161226125openalex-snapshot
Diversity and Inheritance of Intergenic Spacer Sequences of 45S Ribosomal DNA among Accessions of Brassica oleracea L. var. capitata
inferred← citeshttps://doi.org/10.3390/ijms21176395openalex-snapshot
Phylogenetic Utility of rRNA ITS2 Sequence-Structure under Functional Constraint
inferred← citeshttps://doi.org/10.3390/su17177914openalex-snapshot
Tracing the Evolutionary and Migration Pathways of Economically Important Turkish Vicia L. Species: A Molecular and Biogeographic Perspective on Sustainable Agro-Biodiversity
inferred← citeshttps://doi.org/10.3390/toxins7072514openalex-snapshot
Culture-Independent Study of the Late-Stage of a Bloom of the Toxic Dinoflagellate Ostreopsis cf. ovata: Preliminary Findings Suggest Genetic Differences at the Sub-Species Level and Allow ITS2 Structure Characterization
inferred← citeshttps://doi.org/10.3897/bdj.11.e101257openalex-snapshot
Report of two distinct ribotypes in ITS sequences of Phalaris arundinacea (Poaceae) in western Canada and Alaska
inferred← citeshttps://doi.org/10.3906/bot-1712-52openalex-snapshot
Resolving the position of Astragalus borysthenicus Klokov within the Astragalus L. species
inferred← citeshttps://doi.org/10.4467/16890027ap.17.023.7825openalex-snapshot
Constraints on Phylogenetic Interrelationships among Four Free-living Litostomatean Lineages Inferred from 18S rRNA gene-ITS Region sequences and Secondary Structure of the ITS2 molecule
inferred← citeshttps://doi.org/10.47371/s10267-011-0157-9openalex-snapshot
Morphology evolution and molecular phylogeny of Pestalotiopsis (Coelomycetes) based on ITS2 secondary structure
inferred← citeshttps://doi.org/10.53846/goediss-154openalex-snapshot
Untersuchung zur Sekretion und Abtrennung von Lipiden aus Mikroalgen
inferred← citeshttps://doi.org/10.53846/goediss-5497openalex-snapshot
Green algae in soil: assessing their biodiversity and biogeography with molecular-phylogenetic methods based on cultures
inferred← citeshttps://doi.org/10.5507/fot.2019.016openalex-snapshot
RNA consensus structures for inferring green algal phylogeny: A three-taxon analysis for Golenkinia/Jenufa, Sphaeropleales and Volvocales (Chlorophyta, Chlorophyceae)
inferred← citeshttps://doi.org/10.5772/33509openalex-snapshot
DNA Based Techniques for Studying Genetic Diversity
inferred← citeshttps://doi.org/10.70675/4a282259z23fdz4dedz805bz0fa9e3948fbdopenalex-snapshot
Exploration de la diversité et du potentiel pour la reproduction sexuée au sein du complexe d’espèces Amoebophrya ceratii (Syndiniales), parasites de dinoflagellés marins
inferred← citeshttps://doi.org/10.7287/peerj.386v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Quantifying cryptic Symbiodinium diversity within Orbicella faveolata and Orbicella franksi at the Flower Garden Banks, Gulf of Mexico (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.386v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Quantifying cryptic Symbiodinium diversity within Orbicella faveolata and Orbicella franksi at the Flower Garden Banks, Gulf of Mexico (v0.1)"
inferred← citeshttps://doi.org/10.7717/peerj.19870openalex-snapshot
Evaluating COI and ITS2 dual barcoding for molecular delimitation and taxonomic insights in Arenosetella Wilson, 1932 (Harpacticoida: Ectinosomatidae) along Turkish Coasts
inferred← citeshttps://doi.org/10.7717/peerj.386openalex-snapshot
Quantifying cryptic Symbiodinium diversity within Orbicella faveolata and Orbicella franksi at the Flower Garden Banks, Gulf of Mexico
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.