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Mitochondrial DNA repairs double-strand breaks in yeast chromosomes
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/(sici)1097-0061(199611)12:14<1439::aid-yea37>3.0.co;2-oopenalex-snapshot
New Vectors for Combinatorial Deletions in Yeast Chromosomes and for Gap‐repair Cloning using ‘Split‐marker’ Recombination
inferredcites →https://doi.org/10.1002/(sici)1097-0061(199707)13:9<861::aid-yea125>3.0.co;2-9openalex-snapshot
The Characterization of Two New Clusters of Duplicated Genes Suggests a ‘Lego’ Organization of the Yeast Saccharomyces cerevisiae Chromosomes
inferredcites →https://doi.org/10.1002/yea.320101310openalex-snapshot
New heterologous modules for classical or PCR‐based gene disruptions in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1007/bf00266917openalex-snapshot
The repair of double-strand breaks in the nuclear DNA of Saccharomyces cerevisiae and its genetic control
inferredcites →https://doi.org/10.1007/bf00277054openalex-snapshot
Consequences of unique double-stranded breaks in yeast chromosomes: death or homozygosis
inferredcites →https://doi.org/10.1007/bf00317070openalex-snapshot
Evolutionarily recent transfer of a group I mitochondrial intron to telomere regions in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1016/0168-9525(88)90164-3openalex-snapshot
Mitochondria: A practical approach
inferredcites →https://doi.org/10.1016/0378-1119(86)90060-0openalex-snapshot
The primary structure of the mitochondrial genome of Saccharomyces cerevisiae — a review
inferredcites →https://doi.org/10.1016/s0014-5793(98)01467-7openalex-snapshot
The complete sequence of the mitochondrial genome of Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1016/s0074-7696(08)62223-8openalex-snapshot
Escape and Migration of Nucleic Acids between Chloroplasts, Mitochondria, and the Nucleus
inferredcites →https://doi.org/10.1016/s0378-1119(98)00171-1openalex-snapshot
`Mass-murder' of ORFs from three regions of chromosome XI from Saccharomyces cerevisiae1Published in conjunction with A Wisconsin Gathering Honoring Waclaw Szybalski on occasion of his 75th year and 20years of Editorship-in-Chief of Gene, 10–11 August 1997, University of Wisconsin, Madison, WI,…
inferredcites →https://doi.org/10.1016/s0960-9822(02)00441-4openalex-snapshot
Mitochondrial DNA: Molecular fossils in the nucleus
inferredcites →https://doi.org/10.1038/301296a0openalex-snapshot
Rearranged mitochondrial genes in the yeast nuclear genome
inferredcites →https://doi.org/10.1038/346376a0openalex-snapshot
Escape of DNA from mitochondria to the nucleus in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1038/383641a0openalex-snapshot
Retrotransposon reverse-transcriptase-mediated repair of chromosomal breaks
inferredcites →https://doi.org/10.1038/383644a0openalex-snapshot
Capture of retrotransposon DNA at the sites of chromosomal double-strand breaks
inferredcites →https://doi.org/10.1038/387s081openalex-snapshot
The nucleotide sequence of Saccharomyces cerevisiae chromosome VII
inferredcites →https://doi.org/10.1038/387s084openalex-snapshot
The nucleotide sequence of Saccharomyces cerevisiae chromosome IX
inferredcites →https://doi.org/10.1038/42711openalex-snapshot
Molecular evidence for an ancient duplication of the entire yeast genome
inferredcites →https://doi.org/10.1073/pnas.94.10.5213openalex-snapshot
Clustering of meiotic double-strand breaks on yeast chromosome III
inferredcites →https://doi.org/10.1093/genetics/134.1.21openalex-snapshot
Nuclear mutations in Saccharomyces cerevisiae that affect the escape of DNA from mitochondria to the nucleus.
inferredcites →https://doi.org/10.1093/nar/25.22.4650openalex-snapshot
Non-homologous DNA end joining in plant cells is associated with deletions and filler DNA insertions
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025614openalex-snapshot
Mitochondrial DNA migration events in yeast and humans: integration by a common end-joining mechanism and alternative perspectives on nucleotide substitution patterns [published erratum appears in Mol Biol Evol 1996 Jul;13(6):893]
inferredcites →https://doi.org/10.1111/j.1558-5646.1971.tb01930.xopenalex-snapshot
ORIGIN OF EUKARYOTIC CELLS
inferredcites →https://doi.org/10.1128/mcb.13.5.2697openalex-snapshot
Transformation of Saccharomyces cerevisiae with nonhomologous DNA: illegitimate integration of transforming DNA into yeast chromosomes and in vivo ligation of transforming DNA to mitochondrial DNA sequences.
inferredcites →https://doi.org/10.1128/mcb.13.5.2697-2705.1993openalex-snapshot
Transformation of Saccharomyces cerevisiae With Nonhomologous DNA: Illegitimate Integration of Transforming DNA into Yeast Chromosomes and in Vivo Ligation of Transforming DNA to Mitochondrial DNA Sequences
inferredcites →https://doi.org/10.1128/mcb.14.2.1293openalex-snapshot
Two different types of double-strand breaks in Saccharomyces cerevisiae are repaired by similar RAD52-independent, nonhomologous recombination events.
inferredcites →https://doi.org/10.1128/mcb.17.1.267openalex-snapshot
Repair of Site-Specific Double-Strand Breaks in a Mammalian Chromosome by Homologous and Illegitimate Recombination
inferredcites →https://doi.org/10.1128/mcb.6.12.4295openalex-snapshot
Nonhomologous Recombination in Mammalian Cells: Role for Short Sequence Homologies in the Joining Reaction
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Capture of DNA Sequences at Double-Strand Breaks in Mammalian Chromosomes
inferred← citeshttps://doi.org/10.1093/genetics/163.3.843openalex-snapshot
Ku-Dependent and Ku-Independent End-Joining Pathways Lead to Chromosomal Rearrangements During Double-Strand Break Repair in Saccharomyces cerevisiae
inferred← citeshttps://doi.org/10.1093/genetics/166.2.741openalex-snapshot
Reciprocal Translocations in Saccharomyces cerevisiae Formed by Nonhomologous End Joining
inferred← citeshttps://doi.org/10.1093/humupd/7.2.217openalex-snapshot
Epigenetic and experimental modifications in early mammalian development: Part I: Mitochondria: potential roles in embryogenesis and nucleocytoplasmic transfer
inferred← citeshttps://doi.org/10.1093/humupd/dmv024openalex-snapshot
Evolutionary defined role of the mitochondrial DNA in fertility, disease and ageing
inferred← citeshttps://doi.org/10.1093/jrr/rrx091openalex-snapshot
Potential relationship between the biological effects of low-dose irradiation and mitochondrial ROS production
inferred← citeshttps://doi.org/10.1093/jxb/eri025openalex-snapshot
The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution
inferred← citeshttps://doi.org/10.1093/molbev/msh110openalex-snapshot
NUMTs in Sequenced Eukaryotic Genomes
inferred← citeshttps://doi.org/10.1093/molbev/msi170openalex-snapshot
Paleogenomics or the Search for Remnant Duplicated Copies of the Yeast DUP240 Gene Family in Intergenic Areas
inferred← citeshttps://doi.org/10.1093/molbev/msl149openalex-snapshot
A Comparative Analysis of numt Evolution in Human and Chimpanzee
inferred← citeshttps://doi.org/10.1093/molbev/msp131openalex-snapshot
Mitochondrial Insertions into Primate Nuclear Genomes Suggest the Use of numts as a Tool for Phylogeny
inferred← citeshttps://doi.org/10.1093/molbev/msy112openalex-snapshot
Comparative Genomics Reveals a Burst of Homoplasy-Free Numt Insertions
inferred← citeshttps://doi.org/10.1093/mutage/gead031openalex-snapshot
The known unknowns of mitochondrial carcinogenesis:de novoNUMTs and intercellular mitochondrial transfer
inferred← citeshttps://doi.org/10.1093/nar/29.19.3975openalex-snapshot
Promiscuous patching of broken chromosomes in mammalian cells with extrachromosomal DNA
inferred← citeshttps://doi.org/10.1093/nar/gkaa804openalex-snapshot
Mechanisms of replication and repair in mitochondrial DNA deletion formation
inferred← citeshttps://doi.org/10.1093/nar/gkab569openalex-snapshot
Differential efficacies of Cas nucleases on microsatellites involved in human disorders and associated off-target mutations
inferred← citeshttps://doi.org/10.1093/nar/gkm521openalex-snapshot
Capture of linear fragments at a double-strand break in yeast
inferred← citeshttps://doi.org/10.1093/nar/gks424openalex-snapshot
Mammalian NUMT insertion is non-random
inferred← citeshttps://doi.org/10.1093/nar/gkt015openalex-snapshot
Prevalent coordination of mitochondrial DNA transcription and initiation of replication with the cell cycle
inferred← citeshttps://doi.org/10.1093/nar/gku1038openalex-snapshot
The genomic landscape of polymorphic human nuclear mitochondrial insertions
inferred← citeshttps://doi.org/10.1093/nar/gky1212openalex-snapshot
Stress-inducible NHEJ in bacteria: function in DNA repair and acquisition of heterologous DNA
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a004125openalex-snapshot
Ylli, a Non–LTR Retrotransposon L1 Family in the Dimorphic Yeast Yarrowia lipolytica
inferred← citeshttps://doi.org/10.1093/plphys/kiad319openalex-snapshot
Pangenome-based trajectories of intracellular gene transfers in Poaceae unveil high cumulation in Triticeae
inferred← citeshttps://doi.org/10.1094/mpmi-19-1329openalex-snapshot
Extensive Variation in Nuclear Mitochondrial DNA Content Between the Genomes ofPhytophthorasojae andPhytophthora ramorum
inferred← citeshttps://doi.org/10.1101/2022.10.11.511703openalex-snapshot
Pangenome-based dynamic trajectories of intracellular gene transfers in Poaceae unveil a high rate of unceasing integration and selective retention in Triticeae
inferred← citeshttps://doi.org/10.1101/2023.08.07.552327openalex-snapshot
Phylonumtomics uncovers diverse evolutionary trajectories of mitogenomic fossils buried in mammalian and avian genomes
inferred← citeshttps://doi.org/10.1101/2023.08.30.555528openalex-snapshot
Role of NUMTs (Nuclear mitochondrial DNA) genes in affecting disease resistance in duck against Pasteurellosis
inferred← citeshttps://doi.org/10.1101/522524openalex-snapshot
R-loops and regulatory changes in chronologically ageing fission yeast cells drive non-random patterns of genome rearrangements
inferred← citeshttps://doi.org/10.1101/gad.1392506openalex-snapshot
Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast
inferred← citeshttps://doi.org/10.1101/gad.233221.113openalex-snapshot
Nucleosome loss leads to global transcriptional up-regulation and genomic instability during yeast aging
inferred← citeshttps://doi.org/10.1101/gr.104513.109openalex-snapshot
Genome-wide mapping of nuclear mitochondrial DNA sequences links DNA replication origins to chromosomal double-strand break formation in Schizosaccharomyces pombe
inferred← citeshttps://doi.org/10.1101/gr.115592.110openalex-snapshot
Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes
inferred← citeshttps://doi.org/10.1101/gr.190470.115openalex-snapshot
Frequent somatic transfer of mitochondrial DNA into the nuclear genome of human cancer cells
inferred← citeshttps://doi.org/10.1101/gr.279428.124openalex-snapshot
Diverse evolutionary trajectories of mitocoding DNA in mammalian and avian nuclear genomes
inferred← citeshttps://doi.org/10.1101/gr.279609.124openalex-snapshot
Continuous infiltration and evolutionary trajectory of nuclear organelle DNA inOryza
inferred← citeshttps://doi.org/10.1101/gr.3788705openalex-snapshot
Generation and evolutionary fate of insertions of organelle DNA in the nuclear genomes of flowering plants
inferred← citeshttps://doi.org/10.1104/pp.105.060327openalex-snapshot
Mutational Decay and Age of Chloroplast and Mitochondrial Genomes Transferred Recently to Angiosperm Nuclear Chromosomes
inferred← citeshttps://doi.org/10.1105/tpc.104.027706openalex-snapshot
The Rice Nuclear Genome Continuously Integrates, Shuffles, and Eliminates the Chloroplast Genome to Cause Chloroplast–Nuclear DNA Flux
inferred← citeshttps://doi.org/10.1111/1749-4877.12582openalex-snapshot
Genomic landscape of mitochondrial DNA insertions in 23 bat genomes: characteristics, loci, phylogeny, and polymorphism
inferred← citeshttps://doi.org/10.1111/j.1365-2052.2010.02130.xopenalex-snapshot
Mitochondrial DNA insertions in the nuclear horse genome
inferred← citeshttps://doi.org/10.1111/j.1365-2583.2009.00925.xopenalex-snapshot
Abundant nuclear copies of mitochondrial origin (NUMTs) in the Aedes aegypti genome
inferred← citeshttps://doi.org/10.1111/j.1365-2583.2009.00932.xopenalex-snapshot
Transfers of mitochondrial DNA to the nuclear genome in the wasp Nasonia vitripennis
inferred← citeshttps://doi.org/10.1111/j.1365-313x.2009.03787.xopenalex-snapshot
Transposition of a bacterial insertion sequence in chloroplasts
inferred← citeshttps://doi.org/10.1111/j.1474-9726.2010.00607.xopenalex-snapshot
The migration of mitochondrial DNA fragments to the nucleus affects the chronological aging process of Saccharomyces cerevisiae
inferred← citeshttps://doi.org/10.1111/j.1567-1364.2008.00409.xopenalex-snapshot
Promiscuous DNA in the nuclear genomes of hemiascomycetous yeasts
inferred← citeshttps://doi.org/10.1111/j.1755-0998.2009.02637.xopenalex-snapshot
Evaluation of mitochondrial genes as DNA barcode for Basidiomycota
inferred← citeshttps://doi.org/10.1111/mmi.14218openalex-snapshot
Bacterial NHEJ: a never ending story
inferred← citeshttps://doi.org/10.1111/mmi.15145openalex-snapshot
SUMOylation of yeast Pso2 enhances its translocation and accumulation in the mitochondria and suppresses methyl methanesulfonate‐induced mitochondrial DNA damage
inferred← citeshttps://doi.org/10.1111/tpj.13769openalex-snapshot
Experimental reconstruction of double‐stranded break repair‐mediated plastid DNA insertion into the tobacco nucleus
inferred← citeshttps://doi.org/10.1126/science.1255274openalex-snapshot
The coffee genome provides insight into the convergent evolution of caffeine biosynthesis
inferred← citeshttps://doi.org/10.1128/ec.00110-09openalex-snapshot
Evolutionary Capture of Viral and Plasmid DNA by Yeast Nuclear Chromosomes
inferred← citeshttps://doi.org/10.1128/ec.00263-09openalex-snapshot
Population Polymorphism of Nuclear Mitochondrial DNA Insertions Reveals Widespread Diploidy Associated with Loss of Heterozygosity in Debaryomyces hansenii
inferred← citeshttps://doi.org/10.1128/jvi.00955-10openalex-snapshot
Widespread Horizontal Gene Transfer from Double-Stranded RNA Viruses to Eukaryotic Nuclear Genomes
inferred← citeshttps://doi.org/10.1128/mbio.01375-18openalex-snapshot
Maintenance of Mitochondrial Morphology in Cryptococcus neoformans Is Critical for Stress Resistance and Virulence
inferred← citeshttps://doi.org/10.1128/mcb.20.14.5300-5309.2000openalex-snapshot
DNA Length Dependence of the Single-Strand Annealing Pathway and the Role of Saccharomyces cerevisiae RAD59 in Double-Strand Break Repair
inferred← citeshttps://doi.org/10.1128/mmbr.00022-12openalex-snapshot
Evolutionary Role of Interspecies Hybridization and Genetic Exchanges in Yeasts
inferred← citeshttps://doi.org/10.1128/spectrum.00663-21openalex-snapshot
Complete Genome Sequences and Genome-Wide Characterization of Trichoderma Biocontrol Agents Provide New Insights into their Evolution and Variation in Genome Organization, Sexual Development, and Fungal-Plant Interactions
inferred← citeshttps://doi.org/10.1134/s0026893310030027openalex-snapshot
Nuclear mitochondrial pseudogenes
inferred← citeshttps://doi.org/10.1134/s1022795408040017openalex-snapshot
Lesions of the mitochondrial genome and ways of its preservation
inferred← citeshttps://doi.org/10.1134/s2079086413060054openalex-snapshot
Studies of mitochondrial sequences in the nuclear genome of animals
inferred← citeshttps://doi.org/10.1139/g01-040openalex-snapshot
Genomic interspersions determine the size and complexity of transgene loci in transgenic plants produced by microprojectile bombardment
inferred← citeshttps://doi.org/10.1139/gen-2019-0151openalex-snapshot
Insertions of mitochondrial DNA into the nucleus—effects and role in cell evolution
inferred← citeshttps://doi.org/10.1146/annurev-cellbio-112122-030835openalex-snapshot
Diversification of Antibodies: From V(D)J Recombination to Somatic Exon Shuffling
inferred← citeshttps://doi.org/10.1146/annurev-genet-120215-035329openalex-snapshot
Witnessing Genome Evolution: Experimental Reconstruction of Endosymbiotic and Horizontal Gene Transfer
inferred← citeshttps://doi.org/10.1146/annurev.arplant.043008.092119openalex-snapshot
DNA Transfer from Organelles to the Nucleus: The Idiosyncratic Genetics of Endosymbiosis
inferred← citeshttps://doi.org/10.1159/000084938openalex-snapshot
Reverse transcription in genome evolution
inferred← citeshttps://doi.org/10.11606/t.42.2010.tde-06102010-162442openalex-snapshot
Caracterização funcional da proteína Coq10p de Saccharomyces cerevisiae na atividade respiratória da coenzima Q.
inferred← citeshttps://doi.org/10.1186/1471-2148-11-364openalex-snapshot
Mechanisms of intron gain and loss in Drosophila
inferred← citeshttps://doi.org/10.1186/1471-2164-15-751openalex-snapshot
Fragmented mitochondrial genomes are present in both major clades of the blood-sucking lice (suborder Anoplura): evidence from two Hoplopleura rodent lice (family Hoplopleuridae)
inferred← citeshttps://doi.org/10.1186/1743-7075-10-63openalex-snapshot
Mitochondrial-associated metabolic disorders: foundations, pathologies and recent progress
inferred← citeshttps://doi.org/10.1186/1745-6150-7-29openalex-snapshot
Identifying the mechanisms of intron gain: progress and trends
inferred← citeshttps://doi.org/10.1186/s12711-024-00930-6openalex-snapshot
A comprehensive atlas of nuclear sequences of mitochondrial origin (NUMT) inserted into the pig genome
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