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From genes to phenotype: dynamical systems and evolvability
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Heterochrony in Evolution
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Developmental Constraints in Evolutionary Processes
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Expression of cell adhesion molecules during embryogenesis and regeneration
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The evolution of individuality
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Quantitative genetics and developmental constraints on evolution by selection
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Antibodies to liver cell adhesion molecule perturb inductive interactions and alter feather pattern and structure.
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The Emergence of Phenotypic Novelties Through Progressive Genetic Change
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The chemical basis of morphogenesis
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The evolution of the development
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EVOLUTION AND BIFURCATION OF DEVELOPMENTAL PROGRAMS
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A DEVELOPMENTAL ANALYSIS OF AN EVOLUTIONARY TREND: DIGITAL REDUCTION IN AMPHIBIANS
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EVOLUTION AND MORPHOGENETIC RULES: THE SHAPE OF THE VERTEBRATE LIMB IN ONTOGENY AND PHYLOGENY
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Hierarchical Inductions of Cell States: A Model for Segmentation in Drosophila
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The Origins of Theoretical Population Genetics.
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The Evolutionary Synthesis
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Wonderful life: the Burgess Shale and the nature of history
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The Origins of Theoretical Population Genetics
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Evolution of Evolvability
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Genonets server—a web server for the construction, analysis and visualization of genotype networks
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Capturing Processes
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Mutation, Randomness, and Evolution
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List of Tables and Boxes
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Introduction: a curious disconnect
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Ordinary randomness
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Practical Randomness
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Evolutionary Randomness
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.003.0005openalex-snapshot
Mutational mechanisms and evolvability
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.003.0006openalex-snapshot
Randomness as Irrelevance
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.003.0007openalex-snapshot
The problem of variation
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.003.0008openalex-snapshot
Climbing Mount Probable
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.003.0009openalex-snapshot
The revolt of the clay
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.005.0001openalex-snapshot
Mutation exemplars
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.005.0002openalex-snapshot
Counting the universe of mutations
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.005.0003openalex-snapshot
Randomness quotations
inferred← citeshttps://doi.org/10.1093/oso/9780198844457.005.0004openalex-snapshot
Irrelevance quotations
inferred← citeshttps://doi.org/10.1098/rsfs.2021.0007openalex-snapshot
Homology of process: developmental dynamics in comparative biology
inferred← citeshttps://doi.org/10.1098/rsfs.2021.0011openalex-snapshot
Dynamical modules in metabolism, cell and developmental biology
inferred← citeshttps://doi.org/10.1098/rsfs.2024.0010openalex-snapshot
Fundamental constraints to the logic of living systems
inferred← citeshttps://doi.org/10.1098/rsfs.2024.0011openalex-snapshot
The legacy and evolvability of Pere Alberch’s ideas
inferred← citeshttps://doi.org/10.1098/rsfs.2024.0023openalex-snapshot
The logic of monsters: development and morphological diversity in stem-cell-based embryo models
inferred← citeshttps://doi.org/10.1098/rsif.2014.0249openalex-snapshot
A tractable genotype–phenotype map modelling the self-assembly of protein quaternary structure
inferred← citeshttps://doi.org/10.1098/rsif.2017.0516openalex-snapshot
Adding levels of complexity enhances robustness and evolvability in a multilevel genotype–phenotype map
inferred← citeshttps://doi.org/10.1098/rsif.2019.0332openalex-snapshot
Model genotype–phenotype mappings and the algorithmic structure of evolution
inferred← citeshttps://doi.org/10.1098/rsif.2020.0607openalex-snapshot
Ecological models: higher complexity in, higher feasibility out
inferred← citeshttps://doi.org/10.1098/rsif.2023.0349openalex-snapshot
Assembly archetypes in ecological communities
inferred← citeshttps://doi.org/10.1098/rsos.241992openalex-snapshot
Polygenic prediction and gene regulation networks
inferred← citeshttps://doi.org/10.1098/rspb.2011.2183openalex-snapshot
Epistasis can lead to fragmented neutral spaces and contingency in evolution
inferred← citeshttps://doi.org/10.1098/rspb.2024.0269openalex-snapshot
Mechanistic interactions as the origin of modularity in biological networks
inferred← citeshttps://doi.org/10.1098/rspb.2025.2393openalex-snapshot
Ultimate paths of least resistance: intrinsically disordered proteins as developmental resets in regulatory networks
inferred← citeshttps://doi.org/10.1098/rstb.2009.0241openalex-snapshot
Genotype–phenotype mapping and the end of the ‘genes as blueprint’ metaphor
inferred← citeshttps://doi.org/10.1098/rstb.2009.0249openalex-snapshot
Conflicting processes in the evolution of body size and development time
inferred← citeshttps://doi.org/10.1098/rstb.2009.0267openalex-snapshot
Phenotypic plasticity in development and evolution: facts and concepts
inferred← citeshttps://doi.org/10.1101/004218openalex-snapshot
Bridging the Genotype and the Phenotype: Towards An Epigenetic Landscape Approach to Evolutionary Systems Biology
inferred← citeshttps://doi.org/10.1101/2020.01.24.918011openalex-snapshot
Variation in a pleiotropic hub gene drives morphological evolution: Insights from interspecific differences in head shape and eye size in Drosophila
inferred← citeshttps://doi.org/10.1101/2021.01.20.427416openalex-snapshot
Evolution of Phenotypic Plasticity under Host-Parasite Interactions
inferred← citeshttps://doi.org/10.1101/2023.07.02.547400openalex-snapshot
The architecture of multifunctional ecological networks
inferred← citeshttps://doi.org/10.1101/2023.11.03.565446openalex-snapshot
Using developmental dynamics for evolutionary prediction and control
inferred← citeshttps://doi.org/10.1101/2024.08.25.609583openalex-snapshot
Fluidity and Predictability of Epistasis on an Intragenic Fitness Landscape
inferred← citeshttps://doi.org/10.1101/2025.04.05.647371openalex-snapshot
Low-dimensional genotype-fitness mapping across divergent environments suggests a limiting functions model of fitness
inferred← citeshttps://doi.org/10.1103/48k2-cw3bopenalex-snapshot
Learning by Training: Emergent Physical Memory from Cyclically Tuning Disordered Sphere Packings
inferred← citeshttps://doi.org/10.1104/pp.16.00795openalex-snapshot
Proteomes and Ubiquitylomes Analysis Reveals the Involvement of Ubiquitination in Protein Degradation in Petunias
inferred← citeshttps://doi.org/10.1109/globalsip45357.2019.8969566openalex-snapshot
Sampling Signals On Meet/Join Lattices
inferred← citeshttps://doi.org/10.1109/tsp.2021.3081036openalex-snapshot
Discrete Signal Processing on Meet/Join Lattices
inferred← citeshttps://doi.org/10.1111/ede.12098openalex-snapshot
Not all roads can be taken: development induces anisotropic accessibility in morphospace
inferred← citeshttps://doi.org/10.1111/ele.12632openalex-snapshot
Eco‐evolutionary partitioning metrics: assessing the importance of ecological and evolutionary contributions to population and community change
inferred← citeshttps://doi.org/10.1111/evo.13487openalex-snapshot
The architecture of an empirical genotype-phenotype map
inferred← citeshttps://doi.org/10.1111/j.0014-3820.2003.tb00354.xopenalex-snapshot
PERSPECTIVE: GENETIC ASSIMILATION AND A POSSIBLE EVOLUTIONARY PARADOX: CAN MACROEVOLUTION SOMETIMES BE SO FAST AS TO PASS US BY?
inferred← citeshttps://doi.org/10.1111/j.1469-185x.1997.tb00026.xopenalex-snapshot
Heterochrony and allometry: the analysis of evolutionary change in ontogeny
inferred← citeshttps://doi.org/10.1111/j.1558-5646.2007.00303.xopenalex-snapshot
EVOLUTION OF EVOLVABILITY IN A DEVELOPMENTAL MODEL
inferred← citeshttps://doi.org/10.1111/mec.15823openalex-snapshot
Nonparallel transcriptional divergence during parallel adaptation
inferred← citeshttps://doi.org/10.1113/jphysiol.2012.248864openalex-snapshot
Bridging the genotype–phenotype gap: what does it take?
inferred← citeshttps://doi.org/10.1113/jphysiol.2014.272385openalex-snapshot
Bioattractors: dynamical systems theory and the evolution of regulatory processes
inferred← citeshttps://doi.org/10.1126/sciadv.aea6945openalex-snapshot
Mapping life’s disparity and evolutionary constraints in a geometric complexity space
inferred← citeshttps://doi.org/10.1134/s0006297917120069openalex-snapshot
On the cause and mechanism of phenoptosis
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