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Rampant Gene Loss in the Underground Orchid Rhizanthella gardneri Highlights Evolutionary Constraints on Plastid Genomes

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/bies.20194openalex-snapshot

Energy transduction anchors genes in organelles

inferredcites →https://doi.org/10.1002/bies.20209openalex-snapshot

Forces maintaining organellar genomes: is any as strong as genetic code disparity or hydrophobicity?

inferredcites →https://doi.org/10.1006/jmbi.1996.0449openalex-snapshot

Complete Gene Map of the Plastid-like DNA of the Malaria ParasitePlasmodium falciparum

inferredcites →https://doi.org/10.1006/jmbi.1997.1115openalex-snapshot

Splicing and intron-internal RNA editing of trnK-matK transcripts in barley plastids: support for MatK as an essential splice factor

inferredcites →https://doi.org/10.1007/bf00985731openalex-snapshot

The chloroplast genome arrangement ofLobelia thuliniana (Lobeliaceae): Expansion of the inverted repeat in an ancestor of theCampanulales

inferredcites →https://doi.org/10.1007/bf02426962openalex-snapshot

Phylogenetic affinities of the grasses to other monocots as revealed by molecular analysis of chloroplast DNA

inferredcites →https://doi.org/10.1007/s00239-002-2333-yopenalex-snapshot

Nucleotide Substitution Rates in Legume Chloroplast DNA Depend on the Presence of the Inverted Repeat

inferredcites →https://doi.org/10.1007/s00239-008-9180-7openalex-snapshot

Extensive Reorganization of the Plastid Genome of Trifolium subterraneum (Fabaceae) Is Associated with Numerous Repeated Sequences and Novel DNA Insertions

inferredcites →https://doi.org/10.1007/s004250050349openalex-snapshot

Localization of photosynthetic metabolism in the parasitic angiosperm Cuscuta reflexa

inferredcites →https://doi.org/10.1007/s00438-007-0222-4openalex-snapshot

High diversity of plastidial promoters in Arabidopsis thaliana

inferredcites →https://doi.org/10.1007/s11104-008-9877-9openalex-snapshot

Mycorrhizal associations and other means of nutrition of vascular plants: understanding the global diversity of host plants by resolving conflicting information and developing reliable means of diagnosis

inferredcites →https://doi.org/10.1016/j.cub.2008.11.067openalex-snapshot

The Puzzle of Plastid Evolution

inferredcites →https://doi.org/10.1016/j.exppara.2009.07.007openalex-snapshot

Babesia bovis: A comprehensive phylogenetic analysis of plastid-encoded genes supports green algal origin of apicoplasts

inferredcites →https://doi.org/10.1016/j.gene.2009.02.006openalex-snapshot

Conservation of selection on matK following an ancient loss of its flanking intron

inferredcites →https://doi.org/10.1016/j.mycres.2009.07.007openalex-snapshot

Identity and specificity of the fungi forming mycorrhizas with the rare mycoheterotrophic orchid Rhizanthella gardneri

inferredcites →https://doi.org/10.1016/j.pbi.2006.03.012openalex-snapshot

Non-vesicular and vesicular lipid trafficking involving plastids

inferredcites →https://doi.org/10.1016/j.tplants.2005.12.004openalex-snapshot

Why are plastid genomes retained in non-photosynthetic organisms?

inferredcites →https://doi.org/10.1016/j.tplants.2008.10.001openalex-snapshot

Pentatricopeptide repeat proteins: a socket set for organelle gene expression

inferredcites →https://doi.org/10.1016/j.tplants.2010.01.004openalex-snapshot

The evolution of parasitism in plants

inferredcites →https://doi.org/10.1016/s1360-1385(02)02233-1openalex-snapshot

Does complexity constrain organelle evolution?

inferredcites →https://doi.org/10.1038/30234openalex-snapshot

Gene transfer to the nucleus and the evolution of chloroplasts

inferredcites →https://doi.org/10.1038/348337a0openalex-snapshot

Loss of photosynthetic and chlororespiratory genes from the plastid genome of a parasitic flowering plant

inferredcites →https://doi.org/10.1038/nature01909openalex-snapshot

The plastid clpP1 protease gene is essential for plant development

inferredcites →https://doi.org/10.1038/nature06039openalex-snapshot

Dating the origin of the Orchidaceae from a fossil orchid with its pollinator

inferredcites →https://doi.org/10.1038/nprot.2007.58openalex-snapshot

Purification of mitochondrial and plastid DNA

inferredcites →https://doi.org/10.1038/nsmb.1370openalex-snapshot

Superwobbling facilitates translation with reduced tRNA sets

inferredcites →https://doi.org/10.1038/sj.emboj.7600266openalex-snapshot

Biogenesis of PSI involves a cascade of translational autoregulation in the chloroplast of Chlamydomonas

inferredcites →https://doi.org/10.1042/bj20081146openalex-snapshot

Identification of new protein substrates for the chloroplast ATP-dependent Clp protease supports its constitutive role in Arabidopsis

inferredcites →https://doi.org/10.1046/j.1365-313x.2000.00722.xopenalex-snapshot

The two largest chloroplast genome‐encoded open reading frames of higher plants are essential genes

inferredcites →https://doi.org/10.1046/j.1529-8817.2003.02070.xopenalex-snapshot

A SINGLE ORIGIN OF PLASTIDS REVISITED: CONVERGENT EVOLUTION IN ORGANELLAR GENOME CONTENT1

inferredcites →https://doi.org/10.1071/9780643090149openalex-snapshot

Monocots: Systematics and Evolution

inferredcites →https://doi.org/10.1073/pnas.0909400107openalex-snapshot

An organellar maturase associates with multiple group II introns

inferredcites →https://doi.org/10.1073/pnas.1003335107openalex-snapshot

A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids

inferredcites →https://doi.org/10.1073/pnas.172234799openalex-snapshot

A single origin of the peridinin- and fucoxanthin-containing plastids in dinoflagellates through tertiary endosymbiosis

inferredcites →https://doi.org/10.1073/pnas.2533668100openalex-snapshot

Plastid protein synthesis is required for plant development in tobacco

inferredcites →https://doi.org/10.1073/pnas.84.24.9054openalex-snapshot

Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs.

inferredcites →https://doi.org/10.1073/pnas.85.11.3898openalex-snapshot

Chloroplast genomes of two conifers lack a large inverted repeat and are extensively rearranged.

inferredcites →https://doi.org/10.1073/pnas.89.22.10648openalex-snapshot

Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant.

inferredcites →https://doi.org/10.1074/mcp.m900104-mcp200openalex-snapshot

Large Scale Comparative Proteomics of a Chloroplast Clp Protease Mutant Reveals Folding Stress, Altered Protein Homeostasis, and Feedback Regulation of Metabolism

inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot

MrBayes 3: Bayesian phylogenetic inference under mixed models

inferredcites →https://doi.org/10.1093/bioinformatics/btn548openalex-snapshot

Aggressive assembly of pyrosequencing reads with mates

inferredcites →https://doi.org/10.1093/emboj/16.13.4041openalex-snapshot

The two RNA polymerases encoded by the nuclear and the plastid compartments transcribe distinct groups of genes in tobacco plastids

inferredcites →https://doi.org/10.1093/gbe/evp047openalex-snapshot

The Complete Plastid Genome Sequence of the Secondarily Nonphotosynthetic Alga Cryptomonas paramecium: Reduction, Compaction, and Accelerated Evolutionary Rate

inferredcites →https://doi.org/10.1093/genetics/150.1.425openalex-snapshot

A Subset of Conserved tRNA Genes in Plastid DNA of Nongreen Plants

inferredcites →https://doi.org/10.1093/jxb/erm292openalex-snapshot

The remarkable chloroplast genome of dinoflagellates

inferredcites →https://doi.org/10.1093/molbev/msj029openalex-snapshot

The Chloroplast Genome of Phalaenopsis aphrodite (Orchidaceae): Comparative Analysis of Evolutionary Rate with that of Grasses and Its Phylogenetic Implications

inferredcites →https://doi.org/10.1093/molbev/msl089openalex-snapshot

The Complete Chloroplast Genome Sequence of Pelargonium × hortorum: Organization and Evolution of the Largest and Most Highly Rearranged Chloroplast Genome of Land Plants

inferredcites →https://doi.org/10.1093/molbev/msm267openalex-snapshot

Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis

inferredcites →https://doi.org/10.1093/nar/27.19.3866openalex-snapshot

Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants

inferredcites →https://doi.org/10.1093/nar/gkh152openalex-snapshot

ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences

inferredcites →https://doi.org/10.1093/nar/gkl448openalex-snapshot

Identification of small non-coding RNAs from mitochondria and chloroplasts

inferredcites →https://doi.org/10.1093/oxfordjournals.pcp.a028920openalex-snapshot

Acetyl-CoA Carboxylase in Higher Plants: Most Plants Other Than Gramineae Have Both the Prokaryotic and the Eukaryotic Forms of This Enzyme

inferredcites →https://doi.org/10.1104/pp.106.088096openalex-snapshot

Arabidopsis Orthologs of Maize Chloroplast Splicing Factors Promote Splicing of Orthologous and Species-Specific Group II Introns

inferredcites →https://doi.org/10.1105/tpc.108.063784openalex-snapshot

Subunits of the Plastid ClpPR Protease Complex Have Differential Contributions to Embryogenesis, Plastid Biogenesis, and Plant Development inArabidopsis

inferredcites →https://doi.org/10.1105/tpc.9.3.283openalex-snapshot

Nuclear mutations that block group II RNA splicing in maize chloroplasts reveal several intron classes with distinct requirements for splicing factors.

inferredcites →https://doi.org/10.1111/j.1365-294x.2008.03899.xopenalex-snapshot

Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota

inferredcites →https://doi.org/10.1111/j.1365-313x.2005.02533.xopenalex-snapshot

The tobacco plastid acc D gene is essential and is required for leaf development

inferredcites →https://doi.org/10.1111/j.1365-313x.2005.02580.xopenalex-snapshot

Requirement of aminoacyl‐tRNA synthetases for gametogenesis and embryo development in Arabidopsis

inferredcites →https://doi.org/10.1111/j.1365-313x.2008.03581.xopenalex-snapshot

The pentatricopeptide repeat gene OTP51 with two LAGLIDADG motifs is required for the cis ‐splicing of plastid ycf3 intron 2 in Arabidopsis thaliana

inferredcites →https://doi.org/10.1111/j.1469-8137.2010.03246.xopenalex-snapshot

Carbon and nitrogen supply to the underground orchid, Rhizanthella gardneri

inferredcites →https://doi.org/10.1126/science.275.5305.1485openalex-snapshot

A Plastid of Probable Green Algal Origin in Apicomplexan Parasites

inferredcites →https://doi.org/10.1146/annurev.arplant.57.032905.105448openalex-snapshot

Tetrapyrrole Biosynthesis in Higher Plants

inferredcites →https://doi.org/10.1186/1471-2105-5-113openalex-snapshot

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

inferredcites →https://doi.org/10.1186/1471-2148-5-16openalex-snapshot

Rate variation in parasitic plants: correlated and uncorrelated patterns among plastid genes of different function

inferredcites →https://doi.org/10.1186/1471-2164-7-297openalex-snapshot

Comparative analysis of dinoflagellate chloroplast genomes reveals rRNA and tRNA genes

inferredcites →https://doi.org/10.1186/1471-2164-8-174openalex-snapshot

Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus

inferredcites →https://doi.org/10.1186/1471-2229-7-45openalex-snapshot

Complete DNA sequences of the plastid genomes of two parasitic flowering plant species, Cuscuta reflexa and Cuscuta gronovii

inferredcites →https://doi.org/10.1186/1741-7007-4-12openalex-snapshot

The complete plastid genome sequence of the parasitic green alga Helicosporidium sp. is highly reduced and structured

inferredcites →https://doi.org/10.1186/gb-2005-6-5-110openalex-snapshot

Why genes persist in organelle genomes.

inferredcites →https://doi.org/10.1371/journal.pone.0005982openalex-snapshot

Parallel Loss of Plastid Introns and Their Maturase in the Genus Cuscuta

inferredcites →https://doi.org/10.1515/bc.2007.099openalex-snapshot

Protein import into chloroplasts: new aspects of a well-known topic

inferredcites →https://doi.org/10.2307/3558366openalex-snapshot

A phylogenetic analysis of Diurideae (Orchidaceae) based on plastid DNA sequence data

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/phytotaxa.548.2.6zenodo-depositor-declared

Insight from newly sequenced chloroplast genome challenges the primitive position of Corydalis temulifolia (Papaveraceae)

inferred← citeshttps://doi.org/10.1002/ajb2.1070openalex-snapshot

Phylogenomic inference in extremis: A case study with mycoheterotroph plastomes

inferred← citeshttps://doi.org/10.1002/ajb2.16084openalex-snapshot

Phylogenomics and plastome evolution of a Brazilian mycoheterotrophic orchid, Pogoniopsis schenckii

inferred← citeshttps://doi.org/10.1002/ajb2.16370openalex-snapshot

Plastid genome evolution in leafless members of the orchid subfamily Orchidoideae, with a focus on Degranvillea dermaptera

inferred← citeshttps://doi.org/10.1002/ajb2.70267openalex-snapshot

Placing very long branch taxa in the plant tree of life: A case study with Dioscoreales mycoheterotrophs

inferred← citeshttps://doi.org/10.1002/ece3.7281openalex-snapshot

Lineage‐specific plastid degradation in subtribe Gentianinae (Gentianaceae)

inferred← citeshttps://doi.org/10.1002/ece3.7381openalex-snapshot

Molecular evolution and SSRs analysis based on the chloroplast genome ofCallitropsis funebris

inferred← citeshttps://doi.org/10.1002/ece3.74449openalex-snapshot

Phylogenomics Clarifies Plastome Reduction and Phylogenetic Relationships in Monotropoideae

inferred← citeshttps://doi.org/10.1002/ppp3.45openalex-snapshot

Rhizanthella: Orchids unseen

inferred← citeshttps://doi.org/10.1002/tax.70257openalex-snapshot

A revised phylogeny and taxonomy of Buckleya (Thesiaceae)

inferred← citeshttps://doi.org/10.1007/978-1-0716-1472-3_1openalex-snapshot

Plastid Genomes of Flowering Plants: Essential Principles

inferred← citeshttps://doi.org/10.1007/978-1-4614-5209-6_1openalex-snapshot

Mycoheterotrophy: An Introduction

inferred← citeshttps://doi.org/10.1007/978-1-4614-5209-6_5openalex-snapshot

Evolution and Diversification

inferred← citeshttps://doi.org/10.1007/978-1-4614-5209-6_6openalex-snapshot

Progress and Prospects for the Ecological Genetics of Mycoheterotrophs

inferred← citeshttps://doi.org/10.1007/978-1-62703-995-6_1openalex-snapshot

The Plastid Genomes of Flowering Plants

inferred← citeshttps://doi.org/10.1007/978-3-031-57446-7_7openalex-snapshot

Plastid Evolution in Non-photosynthetic Lineages

inferred← citeshttps://doi.org/10.1007/978-3-319-43694-4_10openalex-snapshot

Diversity and Evolution of B. napus Chloroplast Genome

inferred← citeshttps://doi.org/10.1007/978-3-319-70034-2_3openalex-snapshot

Exotic Appearance

inferred← citeshttps://doi.org/10.1007/978-3-642-22380-8_4openalex-snapshot

Plastid Genomes of Parasitic Plants: A Trail of Reductions and Losses

inferred← citeshttps://doi.org/10.1007/978-3-642-22380-8_7openalex-snapshot

Gene Transfer to the Nucleus

inferred← citeshttps://doi.org/10.1007/978-3-642-38146-1_15openalex-snapshot

Genomic Evolution in Orobanchaceae

inferred← citeshttps://doi.org/10.1007/978-3-642-38797-5_3openalex-snapshot

Reduced Genomes from Parasitic Plant Plastids: Templates for Minimal Plastomes?

inferred← citeshttps://doi.org/10.1007/978-94-007-2920-9_5openalex-snapshot

Plastid Genomes of Seed Plants

inferred← citeshttps://doi.org/10.1007/978-94-007-2920-9_9openalex-snapshot

Promiscuous Organellar DNA

inferred← citeshttps://doi.org/10.1007/s00239-013-9579-7openalex-snapshot

Evolution of Plant Mitochondrial Intron-Encoded Maturases: Frequent Lineage-Specific Loss and Recurrent Intracellular Transfer to the Nucleus

inferred← citeshttps://doi.org/10.1007/s00239-025-10242-yopenalex-snapshot

De Novo Creation of Two Novel Spliceosomal Introns of RECG1 by Intronization of Formerly Exonic Sequences in Orchidaceae

inferred← citeshttps://doi.org/10.1007/s00294-017-0761-0openalex-snapshot

Reductive evolution of chloroplasts in non-photosynthetic plants, algae and protists

inferred← citeshttps://doi.org/10.1007/s00425-011-1494-9openalex-snapshot

Piecing together the puzzle of parasitic plant plastome evolution

inferred← citeshttps://doi.org/10.1007/s00438-015-1159-7openalex-snapshot

Non-functional plastid ndh gene fragments are present in the nuclear genome of Norway spruce (Picea abies L. Karsch): insights from in silico analysis of nuclear and organellar genomes

inferred← citeshttps://doi.org/10.1007/s00606-013-0971-yopenalex-snapshot

Phylogenomics, molecular evolution, and estimated ages of lineages from the deep phylogeny of Poaceae

inferred← citeshttps://doi.org/10.1007/s00606-017-1472-1openalex-snapshot

Sequencing of the plastome in the leafless green mycoheterotroph Cymbidium macrorhizon helps us to understand an early stage of fully mycoheterotrophic plastome structure

inferred← citeshttps://doi.org/10.1007/s10265-013-0612-0openalex-snapshot

First flowering hybrid between autotrophic and mycoheterotrophic plant species: breakthrough in molecular biology of mycoheterotrophy

inferred← citeshttps://doi.org/10.1007/s10265-020-01244-6openalex-snapshot

Evolutionary histories and mycorrhizal associations of mycoheterotrophic plants dependent on saprotrophic fungi

inferred← citeshttps://doi.org/10.1007/s11103-012-9884-3openalex-snapshot

Plastid genome evolution in mycoheterotrophic Ericaceae

inferred← citeshttps://doi.org/10.1007/s11105-012-0461-3openalex-snapshot

Loss of the Acetyl-CoA Carboxylase (accD) Gene in Poales

inferred← citeshttps://doi.org/10.1007/s11105-014-0833-yopenalex-snapshot

The Largest Plastid Genome of Monocots: a Novel Genome Type Containing AT Residue Repeats in the Slipper Orchid Cypripedium japonicum

inferred← citeshttps://doi.org/10.1007/s11105-015-0914-6openalex-snapshot

Phylogenetic Inferences and the Evolution of Plastid DNA in Campynemataceae and the Mycoheterotrophic Corsia dispar D.L Jones & B. Gray (Corsiaceae)

inferred← citeshttps://doi.org/10.1007/s12298-021-01051-wopenalex-snapshot

Complete chloroplast genome of the medicinal plant Evolvulus alsinoides: comparative analysis, identification of mutational hotspots and evolutionary dynamics with species of Solanales

inferred← citeshttps://doi.org/10.1007/s13205-019-2020-1openalex-snapshot

Analysis of complete chloroplast genome sequence of Korean landrace Cymbidium goeringii

inferred← citeshttps://doi.org/10.1007/s40415-019-00524-3openalex-snapshot

Complete chloroplast genome of Anathallis obovata (Orchidaceae: Pleurothallidinae)

inferred← citeshttps://doi.org/10.1016/b978-0-12-800097-7.00001-4openalex-snapshot

Structure and Function of POTRA Domains of Omp85/TPS Superfamily

inferred← citeshttps://doi.org/10.1016/bs.abr.2017.11.014openalex-snapshot

Molecular Evolution of Plastid Genomes in Parasitic Flowering Plants

inferred← citeshttps://doi.org/10.1016/j.bbabio.2015.02.011openalex-snapshot

The TIC complex uncovered: The alternative view on the molecular mechanism of protein translocation across the inner envelope membrane of chloroplasts

inferred← citeshttps://doi.org/10.1016/j.biochi.2013.08.019openalex-snapshot

Surrogate mutants for studying mitochondrially encoded functions

inferred← citeshttps://doi.org/10.1016/j.chmed.2020.05.008openalex-snapshot

Complete chloroplast genome sequence of Amomum villosum and comparative analysis with other Zingiberaceae plants

inferred← citeshttps://doi.org/10.1016/j.cub.2011.11.011openalex-snapshot

Transcriptomes of the Parasitic Plant Family Orobanchaceae Reveal Surprising Conservation of Chlorophyll Synthesis

inferred← citeshttps://doi.org/10.1016/j.gene.2012.03.061openalex-snapshot

Characterization of the chloroplast genome sequence of oil palm (Elaeis guineensis Jacq.)

inferred← citeshttps://doi.org/10.1016/j.gene.2015.12.005openalex-snapshot

The complete chloroplast genome of Gentiana straminea (Gentianaceae), an endemic species to the Sino-Himalayan subregion

inferred← citeshttps://doi.org/10.1016/j.gene.2019.144154openalex-snapshot

Complete plastome sequencing of Allium paradoxum reveals unusual rearrangements and the loss of the ndh genes as compared to Allium ursinum and other onions

inferred← citeshttps://doi.org/10.1016/j.genrep.2026.102535openalex-snapshot

Complete chloroplast genome of Onosma hookeri var. longiflora and its phylogenetic relationship

inferred← citeshttps://doi.org/10.1016/j.pld.2016.11.005openalex-snapshot

Degeneration of photosynthetic capacity in mixotrophic plants, Chimaphila japonica and Pyrola decorata (Ericaceae)

inferred← citeshttps://doi.org/10.1016/j.pld.2018.07.004openalex-snapshot

The first complete plastid genome of Burmannia disticha L. from the mycoheterotrophic monocot family Burmanniaceae

inferred← citeshttps://doi.org/10.1016/j.tplants.2011.10.004openalex-snapshot

A structural phylogenetic map for chloroplast photosynthesis

inferred← citeshttps://doi.org/10.1016/j.ympev.2012.05.010openalex-snapshot

Complete cpDNA genome sequence of Smilax china and phylogenetic placement of Liliales – Influences of gene partitions and taxon sampling

inferred← citeshttps://doi.org/10.1016/j.ympev.2019.106540openalex-snapshot

Phylogenomics of Orchidaceae based on plastid and mitochondrial genomes

inferred← citeshttps://doi.org/10.1016/j.ympev.2019.106729openalex-snapshot

Plastid phylogenomic data yield new and robust insights into the phylogeny of Cleisostoma–Gastrochilus clades (Orchidaceae, Aeridinae)

inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107269openalex-snapshot

Plastid phylogenomics improves resolution of phylogenetic relationship in the Cheirostylis and Goodyera clades of Goodyerinae (Orchidoideae, Orchidaceae)

inferred← citeshttps://doi.org/10.1016/j.ympev.2024.108243openalex-snapshot

Taken to extremes: Loss of plastid rpl32 in Streptophyta and Cuscuta’s unconventional solution for its replacement

inferred← citeshttps://doi.org/10.1017/9781316321270openalex-snapshot

Plant Ecology

inferred← citeshttps://doi.org/10.1017/9781316321270.001openalex-snapshot

Preface

inferred← citeshttps://doi.org/10.1017/9781316321270.002openalex-snapshot

Plants Create the Biosphere

inferred← citeshttps://doi.org/10.1017/9781316321270.003openalex-snapshot

The Search for Global Patterns

inferred← citeshttps://doi.org/10.1017/9781316321270.004openalex-snapshot

Resources

inferred← citeshttps://doi.org/10.1017/9781316321270.005openalex-snapshot

Competition

inferred← citeshttps://doi.org/10.1017/9781316321270.006openalex-snapshot

Disturbance

inferred← citeshttps://doi.org/10.1017/9781316321270.007openalex-snapshot

Herbivory

inferred← citeshttps://doi.org/10.1017/9781316321270.008openalex-snapshot

Positive Interactions

inferred← citeshttps://doi.org/10.1017/9781316321270.009openalex-snapshot

Time

inferred← citeshttps://doi.org/10.1017/9781316321270.010openalex-snapshot

Populations

inferred← citeshttps://doi.org/10.1017/9781316321270.011openalex-snapshot

Stress

inferred← citeshttps://doi.org/10.1017/9781316321270.012openalex-snapshot

Gradients and Plant Communities

inferred← citeshttps://doi.org/10.1017/9781316321270.013openalex-snapshot

Diversity

inferred← citeshttps://doi.org/10.1017/9781316321270.014openalex-snapshot

Conservation and Management

inferred← citeshttps://doi.org/10.1017/9781316321270.015openalex-snapshot

Glossary

inferred← citeshttps://doi.org/10.1017/9781316321270.016openalex-snapshot

Index

inferred← citeshttps://doi.org/10.1038/s41598-017-01518-5openalex-snapshot

Inferring the evolutionary mechanism of the chloroplast genome size by comparing whole-chloroplast genome sequences in seed plants

inferred← citeshttps://doi.org/10.1038/s41598-017-13401-4openalex-snapshot

Gene losses and partial deletion of small single-copy regions of the chloroplast genomes of two hemiparasitic Taxillus species

inferred← citeshttps://doi.org/10.1038/s41598-018-32992-0openalex-snapshot

Genome sequencing of Prototheca zopfii genotypes 1 and 2 provides evidence of a severe reduction in organellar genomes

inferred← citeshttps://doi.org/10.1038/s41598-020-59547-6openalex-snapshot

Recurrent gene duplication in the angiosperm tribe Delphinieae (Ranunculaceae) inferred from intracellular gene transfer events and heteroplasmic mutations in the plastid matK gene

inferred← citeshttps://doi.org/10.1038/s41598-020-66024-7openalex-snapshot

Plastome Structural Conservation and Evolution in the Clusioid Clade of Malpighiales

inferred← citeshttps://doi.org/10.1038/s41598-022-13528-zopenalex-snapshot

Comparative analysis of two Korean irises (Iris ruthenica and I. uniflora, Iridaceae) based on plastome sequencing and micromorphology

inferred← citeshttps://doi.org/10.1038/s41598-023-34477-1openalex-snapshot

Comparative plastome genomics, taxonomic delimitation and evolutionary divergences of Tetraena hamiensis var. qatarensis and Tetraena simplex (Zygophyllaceae)

inferred← citeshttps://doi.org/10.1038/s41598-023-45421-8openalex-snapshot

Comparison of chloroplast genomes and phylogenetic analysis of four species in Quercus section Cyclobalanopsis

inferred← citeshttps://doi.org/10.1038/s41598-024-71838-wopenalex-snapshot

The adaptive evolution of Quercus section Ilex using the chloroplast genomes of two threatened species

inferred← citeshttps://doi.org/10.1038/s44318-026-00904-yopenalex-snapshot

From water to land: evolution of tRNA gene repertoires in photosynthetic organisms

inferred← citeshttps://doi.org/10.1038/srep24595openalex-snapshot

Divergence of RNA polymerase α subunits in angiosperm plastid genomes is mediated by genomic rearrangement

inferred← citeshttps://doi.org/10.1038/srep30042openalex-snapshot

Comparative analysis of plastid genomes of non-photosynthetic Ericaceae and their photosynthetic relatives

inferred← citeshttps://doi.org/10.1042/bcj20190365openalex-snapshot

The plastid NAD(P)H dehydrogenase-like complex: structure, function and evolutionary dynamics

inferred← citeshttps://doi.org/10.1071/bt22075openalex-snapshot

Retention of an apparently functional plastome in an apparently mycoheterotrophic orchid, Dipodium roseum D.L.Jones & M.A.Clem. (Orchidaceae)

inferred← citeshttps://doi.org/10.1071/bt22075_coopenalex-snapshot

Corrigendum to : Retention of an apparently functional plastome in an apparently mycoheterotrophic orchid, Dipodium roseum D.L.Jones & M.A.Clem. (Orchidaceae)

inferred← citeshttps://doi.org/10.1073/pnas.1607576113openalex-snapshot

Mechanistic model of evolutionary rate variation en route to a nonphotosynthetic lifestyle in plants

inferred← citeshttps://doi.org/10.1073/pnas.2412221121openalex-snapshot

Extensive import of nucleus-encoded tRNAs into chloroplasts of the photosynthetic lycophyte, Selaginella kraussiana

inferred← citeshttps://doi.org/10.1080/23802359.2016.1155090openalex-snapshot

The complete chloroplast genome of parasitic flowering plant Monotropa hypopitys: extensive gene losses and size reduction

inferred← citeshttps://doi.org/10.1080/23802359.2019.1660282openalex-snapshot

The complete chloroplast genome sequence of Dactylorhiza majalis (Rchb.) P.F. Hunt et Summerh. (Orchidaceae)

inferred← citeshttps://doi.org/10.1080/23802359.2020.1753591openalex-snapshot

Complete chloroplast genome of the endangered Corybas taliensis (Orchidaceae), a plant species with extremely small populations endemic to China

inferred← citeshttps://doi.org/10.1093/aob/mcae084openalex-snapshot

Organellar phylogenomics at the epidendroid orchid base, with a focus on the mycoheterotrophic Wullschlaegelia

inferred← citeshttps://doi.org/10.1093/aob/mcae202openalex-snapshot

Orchid phylogenetics and evolution: history, current status and prospects

inferred← citeshttps://doi.org/10.1093/aob/mcw135openalex-snapshot

Understanding the evolution of holoparasitic plants: the complete plastid genome of the holoparasiteCytinus hypocistis(Cytinaceae)

inferred← citeshttps://doi.org/10.1093/gbe/evaa076openalex-snapshot

Unprecedented Intraindividual Structural Heteroplasmy in Eleocharis (Cyperaceae, Poales) Plastomes

inferred← citeshttps://doi.org/10.1093/gbe/evaa091openalex-snapshot

Plastid Genome Evolution in the Subtribe Calypsoinae (Epidendroideae, Orchidaceae)

inferred← citeshttps://doi.org/10.1093/gbe/evac183openalex-snapshot

Phylotranscriptomic Analyses of Mycoheterotrophic Monocots Show a Continuum of Convergent Evolutionary Changes in Expressed Nuclear Genes From Three Independent Nonphotosynthetic Lineages

inferred← citeshttps://doi.org/10.1093/gbe/evr102openalex-snapshot

Sequencing and Analysis of Plastid Genome in Mycoheterotrophic Orchid Neottia nidus-avis

inferred← citeshttps://doi.org/10.1093/gbe/evs006openalex-snapshot

Recent Acceleration of Plastid Sequence and Structural Evolution Coincides with Extreme Mitochondrial Divergence in the Angiosperm Genus Silene

inferred← citeshttps://doi.org/10.1093/gbe/evu001openalex-snapshot

The Plastid Genome of Mycoheterotrophic Monocot Petrosavia stellaris Exhibits Both Gene Losses and Multiple Rearrangements

inferred← citeshttps://doi.org/10.1093/gbe/evu138openalex-snapshot

A trnI_CAU Triplication Event in the Complete Chloroplast Genome of Paris verticillata M.Bieb. (Melanthiaceae, Liliales)

inferred← citeshttps://doi.org/10.1093/gbe/evv019openalex-snapshot

Exploring the Limits for Reduction of Plastid Genomes: A Case Study of the Mycoheterotrophic Orchids Epipogium aphyllum and Epipogium roseum

inferred← citeshttps://doi.org/10.1093/gbe/evv130openalex-snapshot

Dynamic Evolution of the Chloroplast Genome in the Green Algal Classes Pedinophyceae and Trebouxiophyceae

inferred← citeshttps://doi.org/10.1093/gbe/evv134openalex-snapshot

The Highly Reduced Plastome of MycoheterotrophicSciaphila(Triuridaceae) Is Colinear with Its Green Relatives and Is under Strong Purifying Selection

inferred← citeshttps://doi.org/10.1093/gbe/evv165openalex-snapshot

Plastome Evolution in Hemiparasitic Mistletoes

inferred← citeshttps://doi.org/10.1093/gbe/evv251openalex-snapshot

The Plastomes of Two Species in the Endoparasite GenusPilostyles(Apodanthaceae) Each Retain Just Five or Six Possibly Functional Genes

inferred← citeshttps://doi.org/10.1093/gbe/evv256openalex-snapshot

Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic PlantHydnora visseri(Hydnoraceae)

inferred← citeshttps://doi.org/10.1093/gbe/evw144openalex-snapshot

Lineage-Specific Reductions of Plastid Genomes in an Orchid Tribe with Partially and Fully Mycoheterotrophic Species

inferred← citeshttps://doi.org/10.1093/gbe/evz005openalex-snapshot

Plastome-Wide Rearrangements and Gene Losses in Carnivorous Droseraceae

inferred← citeshttps://doi.org/10.1093/gbe/evz024openalex-snapshot

Extensive Losses of Photosynthesis Genes in the Plastome of a Mycoheterotrophic Orchid,Cyrtosia septentrionalis(Vanilloideae: Orchidaceae)

inferred← citeshttps://doi.org/10.1093/gbe/evz073openalex-snapshot

The Unique Evolutionary Trajectory and Dynamic Conformations of DR and IR/DR-Coexisting Plastomes of the Early Vascular Plant Selaginellaceae (Lycophyte)

inferred← citeshttps://doi.org/10.1093/gbe/evz187openalex-snapshot

Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat

inferred← citeshttps://doi.org/10.1093/gbe/evz271openalex-snapshot

Comparative Plastome Analysis of Root- and Stem-Feeding Parasites of Santalales Untangle the Footprints of Feeding Mode and Lifestyle Transitions

inferred← citeshttps://doi.org/10.1093/jxb/ers391openalex-snapshot

Plastid genome evolution across the genus Cuscuta (Convolvulaceae): two clades within subgenus Grammica exhibit extensive gene loss

inferred← citeshttps://doi.org/10.1093/molbev/mst261openalex-snapshot

Disproportional Plastome-Wide Increase of Substitution Rates and Relaxed Purifying Selection in Genes of Carnivorous Lentibulariaceae

inferred← citeshttps://doi.org/10.1093/molbev/msu120openalex-snapshot

Alterations in rRNA–mRNA Interaction during Plastid Evolution

inferred← citeshttps://doi.org/10.1093/molbev/msu252openalex-snapshot

Investigating the Path of Plastid Genome Degradation in an Early-Transitional Clade of Heterotrophic Orchids, and Implications for Heterotrophic Angiosperms

inferred← citeshttps://doi.org/10.1093/molbev/msv134openalex-snapshot

Proposal of a Twin Aarginine Translocator System-Mediated Constraint against Loss of ATP Synthase Genes from Nonphotosynthetic Plastid Genomes

inferred← citeshttps://doi.org/10.1093/molbev/msv247openalex-snapshot

Proposal of a Twin Aarginine Translocator System-Mediated Constraint against Loss of ATP Synthase Genes from Nonphotosynthetic Plastid Genomes

inferred← citeshttps://doi.org/10.1093/mp/ssu022openalex-snapshot

The Translational Apparatus of Plastids and Its Role in Plant Development

inferred← citeshttps://doi.org/10.1093/nar/gks350openalex-snapshot

Evolutionary constraints on the plastid tRNA set decoding methionine and isoleucine

inferred← citeshttps://doi.org/10.1093/nar/gkx288openalex-snapshot

TraitRateProp: a web server for the detection of trait-dependent evolutionary rate shifts in sequence sites

inferred← citeshttps://doi.org/10.1093/sysbio/syae070openalex-snapshot

Discordance Down Under: Combining Phylogenomics and Fungal Symbioses to Detangle Difficult Nodes in a Diverse Tribe of Australian Terrestrial Orchids

inferred← citeshttps://doi.org/10.1098/rspb.2015.1553openalex-snapshot

Orchid phylogenomics and multiple drivers of their extraordinary diversification

inferred← citeshttps://doi.org/10.1098/rspb.2024.2011openalex-snapshot

The evolution of the plastid genomes in the holoparasitic Balanophoraceae

inferred← citeshttps://doi.org/10.1101/2023.10.25.563914openalex-snapshot

MatK impacts Differential Chloroplast Translation of Ribosomal and Photosynthetic genes by limiting spliced tRNA-K(UUU) abundance

inferred← citeshttps://doi.org/10.1101/241703openalex-snapshot

FabElm_BarcodeDb: matK barcode database of legumes

inferred← citeshttps://doi.org/10.1101/365791openalex-snapshot

Cicada endosymbionts contain tRNAs that are processed despite having genomes that lack tRNA processing activities

inferred← citeshttps://doi.org/10.1104/pp.113.214528openalex-snapshot

Potential Functional Replacement of the Plastidic Acetyl-CoA Carboxylase Subunit (accD) Gene by Recent Transfers to the Nucleus in Some Angiosperm Lineages

inferred← citeshttps://doi.org/10.1104/pp.113.227579openalex-snapshot

Multiple Checkpoints for the Expression of the Chloroplast-Encoded Splicing Factor MatK

inferred← citeshttps://doi.org/10.1104/pp.113.233718openalex-snapshot

A Plastid without a Genome: Evidence from the Nonphotosynthetic Green Algal Genus Polytomella

inferred← citeshttps://doi.org/10.1104/pp.114.249052openalex-snapshot

Natural Variation in Sensitivity to a Loss of Chloroplast Translation in Arabidopsis

inferred← citeshttps://doi.org/10.1104/pp.16.01840openalex-snapshot

The Pentatricopeptide Repeat Protein EMB2654 Is Essential for Trans-Splicing of a Chloroplast Small Ribosomal Subunit Transcript

inferred← citeshttps://doi.org/10.1104/pp.20.00009openalex-snapshot

The Functions of Chloroplast Glutamyl-tRNA in Translation and Tetrapyrrole Biosynthesis

inferred← citeshttps://doi.org/10.1105/tpc.111.088906openalex-snapshot

Nonessential Plastid-Encoded Ribosomal Proteins in Tobacco: A Developmental Role for Plastid Translation and Implications for Reductive Genome Evolution

inferred← citeshttps://doi.org/10.1105/tpc.113.113373openalex-snapshot

Mechanisms of Functional and Physical Genome Reduction in Photosynthetic and Nonphotosynthetic Parasitic Plants of the Broomrape Family

inferred← citeshttps://doi.org/10.1105/tpc.114.135541openalex-snapshot

YCF1: A Green TIC?

inferred← citeshttps://doi.org/10.1109/kse50997.2020.9287768openalex-snapshot

Application of Next-generation Sequencing Method for Elucidating Evolutionary History of Chloroplast Genome in Plant Kingdom

inferred← citeshttps://doi.org/10.1111/1755-0998.12251openalex-snapshot

Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs

inferred← citeshttps://doi.org/10.1111/j.1461-0248.2012.01830.xopenalex-snapshot

Ecological interactions drive evolutionary loss of traits

inferred← citeshttps://doi.org/10.1111/jpy.12996openalex-snapshot

The Organelle Genomes in the Photosynthetic Red Algal Parasite Pterocladiophila hemisphaerica (Florideophyceae, Rhodophyta) Have Elevated Substitution Rates and Extreme Gene Loss in the Plastid Genome

inferred← citeshttps://doi.org/10.1111/jse.12479openalex-snapshot

Plastomes of Betulaceae and phylogenetic implications

inferred← citeshttps://doi.org/10.1111/jse.12579openalex-snapshot

Evaluating character partitioning and molecular models in plastid phylogenomics at low taxonomic levels: A case study using Amphilophium (Bignonieae, Bignoniaceae)

inferred← citeshttps://doi.org/10.1111/njb.01921openalex-snapshot

Remarkably conserved plastid genomes of Quercus group Cerris in China: comparative and phylogenetic analyses

inferred← citeshttps://doi.org/10.1111/nph.13784openalex-snapshot

Massive intracellular gene transfer during plastid genome reduction in nongreen Orobanchaceae

inferred← citeshttps://doi.org/10.1111/nph.14398openalex-snapshot

Plastomes on the edge: the evolutionary breakdown of mycoheterotroph plastid genomes

inferred← citeshttps://doi.org/10.1111/nph.14681openalex-snapshot

On the brink: the highly reduced plastomes of nonphotosynthetic Ericaceae

inferred← citeshttps://doi.org/10.1111/nph.15072openalex-snapshot

Dense infraspecific sampling reveals rapid and independent trajectories of plastome degradation in a heterotrophic orchid complex

inferred← citeshttps://doi.org/10.1111/pbi.12141openalex-snapshot

Highly rearranged and size‐variable chloroplast genomes in conifers II clade (cupressophytes): evolution towards shorter intergenic spacers

inferred← citeshttps://doi.org/10.1111/pce.12230openalex-snapshot

High‐resolution secondary ion mass spectrometry analysis of carbon dynamics in mycorrhizas formed by an obligately myco‐heterotrophic orchid

inferred← citeshttps://doi.org/10.1111/pce.70531openalex-snapshot

Vestigial Plastids in Parasitic Plants: Evolutionary Remnants or Adaptive Innovations?

inferred← citeshttps://doi.org/10.1111/tpj.12356openalex-snapshot

Synthetic biology in plastids

inferred← citeshttps://doi.org/10.1111/tpj.13491openalex-snapshot

What can we do with 1000 plastid genomes?

inferred← citeshttps://doi.org/10.1111/tpj.14208openalex-snapshot

Extreme variation in rates of evolution in the plastid Clp protease complex

inferred← citeshttps://doi.org/10.1111/tpj.16945openalex-snapshot

MatK impacts differential chloroplast translation by limiting spliced tRNA‐K( UUU ) abundance

inferred← citeshttps://doi.org/10.1111/tpj.70198openalex-snapshot

Reverse genetics in the Arabidopsis chloroplast genome identifies rps16 as a transcribed pseudogene

inferred← citeshttps://doi.org/10.1128/mbio.01950-18openalex-snapshot

Cicada Endosymbionts Have tRNAs That Are Correctly Processed Despite Having Genomes That Do Not Encode All of the tRNA Processing Machinery

inferred← citeshttps://doi.org/10.1139/cjb-2020-0054openalex-snapshot

What are the genomic consequences for plastids in a mixotrophic orchid (Epipactis helleborine)?

inferred← citeshttps://doi.org/10.1139/g2012-057openalex-snapshot

Multiple and different genomic rearrangements of therbcL gene are present in the parasitic orchidNeottia nidus-avis

inferred← citeshttps://doi.org/10.1142/9789813109223_0004openalex-snapshot

Comparative Chloroplast DNA Analysis of Phalaenopsis Orchids and Evaluation of cpDNA Markers for Distinguishing Moth Orchids

inferred← citeshttps://doi.org/10.1146/annurev-arplant-042817-040209openalex-snapshot

Genomics-Informed Insights into Endosymbiotic Organelle Evolution in Photosynthetic Eukaryotes

inferred← citeshttps://doi.org/10.11648/j.jps.20180604.13openalex-snapshot

Comparative Chloroplast Genome Analysis of Single-Cell C 4 Bienertia Sinuspersici with Other Amaranthaceae Genomes

inferred← citeshttps://doi.org/10.1186/1471-2148-13-8openalex-snapshot

Complete plastid genomes from Ophioglossum californicum, Psilotum nudum, and Equisetum hyemale reveal an ancestral land plant genome structure and resolve the position of Equisetales among monilophytes

inferred← citeshttps://doi.org/10.1186/1471-2148-14-23openalex-snapshot

From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes

inferred← citeshttps://doi.org/10.1186/1471-2164-15-s9-s13openalex-snapshot

Complete chloroplast genome of Macadamia integrifoliaconfirms the position of the Gondwanan early-diverging eudicot family Proteaceae

inferred← citeshttps://doi.org/10.1186/s12862-014-0268-yopenalex-snapshot

Correlation between sequence divergence and polymorphism reveals similar evolutionary mechanisms acting across multiple timescales in a rapidly evolving plastid genome

inferred← citeshttps://doi.org/10.1186/s12862-015-0491-1openalex-snapshot

Alternative translation initiation codons for the plastid maturase MatK: unraveling the pseudogene misconception in the Orchidaceae

inferred← citeshttps://doi.org/10.1186/s12864-017-3555-3openalex-snapshot

Plastome phylogeny and early diversification of Brassicaceae

inferred← citeshttps://doi.org/10.1186/s12864-017-4014-xopenalex-snapshot

accD nuclear transfer of Platycodon grandiflorum and the plastid of early Campanulaceae

inferred← citeshttps://doi.org/10.1186/s12864-023-09847-8openalex-snapshot

Comparative and phylogenetic analysis of Chiloschista (Orchidaceae) species and DNA barcoding investigation based on plastid genomes

inferred← citeshttps://doi.org/10.1186/s12864-025-11324-3openalex-snapshot

Elucidating the evolutionary dynamics of parasitism in Cuscuta: in-depth phylogenetic reconstruction and extensive plastomes reduction

inferred← citeshttps://doi.org/10.1186/s12870-014-0289-0openalex-snapshot

A precise chloroplast genome of Nelumbo nucifera (Nelumbonaceae) evaluated with Sanger, Illumina MiSeq, and PacBio RS II sequencing platforms: insight into the plastid evolution of basal eudicots

inferred← citeshttps://doi.org/10.1186/s12870-016-0929-7openalex-snapshot

The loss of photosynthetic pathways in the plastid and nuclear genomes of the non-photosynthetic mycoheterotrophic eudicot Monotropa hypopitys

inferred← citeshttps://doi.org/10.1186/s12870-016-0944-8openalex-snapshot

Abundant RNA editing sites of chloroplast protein-coding genes in Ginkgo biloba and an evolutionary pattern analysis

inferred← citeshttps://doi.org/10.1186/s12870-022-03573-1openalex-snapshot

The Gastrodia menghaiensis (Orchidaceae) genome provides new insights of orchid mycorrhizal interactions

inferred← citeshttps://doi.org/10.1186/s12870-022-03836-xopenalex-snapshot

The extremely reduced, diverged and reconfigured plastomes of the largest mycoheterotrophic orchid lineage

inferred← citeshttps://doi.org/10.1186/s12870-023-04302-yopenalex-snapshot

Habitat-related plastome evolution in the mycoheterotrophic Neottia listeroides complex (Orchidaceae, Neottieae)

inferred← citeshttps://doi.org/10.1186/s12870-026-08437-6openalex-snapshot

Mitogenome characterization and organellar genome evolution in achlorophyllous orchid Chamaegastrodia shikokiana Makino & F.Maek. (Orchidaceae)

inferred← citeshttps://doi.org/10.1371/journal.pone.0019254openalex-snapshot

Choosing and Using a Plant DNA Barcode

inferred← citeshttps://doi.org/10.1371/journal.pone.0038788openalex-snapshot

Evolution and Biogeography of the Slipper Orchids: Eocene Vicariance of the Conduplicate Genera in the Old and New World Tropics

inferred← citeshttps://doi.org/10.1371/journal.pone.0048995openalex-snapshot

Reference-Free Comparative Genomics of 174 Chloroplasts

inferred← citeshttps://doi.org/10.1371/journal.pone.0058747openalex-snapshot

Complete Chloroplast Genome Sequence of Holoparasite Cistanche deserticola (Orobanchaceae) Reveals Gene Loss and Horizontal Gene Transfer from Its Host Haloxylon ammodendron (Chenopodiaceae)

inferred← citeshttps://doi.org/10.1371/journal.pone.0074736openalex-snapshot

Complete Sequence and Comparative Analysis of the Chloroplast Genome of Coconut Palm (Cocos nucifera)

inferred← citeshttps://doi.org/10.1371/journal.pone.0077965openalex-snapshot

Complete Chloroplast Genome of Sedum sarmentosum and Chloroplast Genome Evolution in Saxifragales

inferred← citeshttps://doi.org/10.1371/journal.pone.0099016openalex-snapshot

Comparative Chloroplast Genomes of Photosynthetic Orchids: Insights into Evolution of the Orchidaceae and Development of Molecular Markers for Phylogenetic Applications

inferred← citeshttps://doi.org/10.1371/journal.pone.0123382openalex-snapshot

A New Myco-Heterotrophic Genus, Yunorchis, and the Molecular Phylogenetic Relationships of the Tribe Calypsoeae (Epidendroideae, Orchidaceae) Inferred from Plastid and Nuclear DNA Sequences

inferred← citeshttps://doi.org/10.1371/journal.pone.0125768openalex-snapshot

The Complete Sequence of the Acacia ligulata Chloroplast Genome Reveals a Highly Divergent clpP1 Gene

inferred← citeshttps://doi.org/10.1371/journal.pone.0129930openalex-snapshot

Complete Chloroplast Genome of Tanaecium tetragonolobum: The First Bignoniaceae Plastome

inferred← citeshttps://doi.org/10.1371/journal.pone.0142215openalex-snapshot

Seven New Complete Plastome Sequences Reveal Rampant Independent Loss of the ndh Gene Family across Orchids and Associated Instability of the Inverted Repeat/Small Single-Copy Region Boundaries

inferred← citeshttps://doi.org/10.1371/journal.pone.0143792openalex-snapshot

The Complete Chloroplast Genome of Guadua angustifolia and Comparative Analyses of Neotropical-Paleotropical Bamboos

inferred← citeshttps://doi.org/10.1371/journal.pone.0187199openalex-snapshot

The complete chloroplast genome sequence of the CAM epiphyte Spanish moss (Tillandsia usneoides, Bromeliaceae) and its comparative analysis

inferred← citeshttps://doi.org/10.1371/journal.pone.0187318openalex-snapshot

Independent degradation in genes of the plastid ndh gene family in species of the orchid genus Cymbidium (Orchidaceae; Epidendroideae)

inferred← citeshttps://doi.org/10.1371/journal.pone.0202279openalex-snapshot

Organellar genome analysis reveals endosymbiotic gene transfers in tomato

inferred← citeshttps://doi.org/10.1371/journal.pone.0225469openalex-snapshot

Complete Chloroplast Genomes of Vachellia nilotica and Senegalia senegal: Comparative Genomics and Phylogenomic Placement in a New Generic System

inferred← citeshttps://doi.org/10.1371/journal.pone.0226865openalex-snapshot

Complete chloroplast genomes of two Siraitia Merrill species: Comparative analysis, positive selection and novel molecular marker development

inferred← citeshttps://doi.org/10.1371/journal.pone.0227991openalex-snapshot

Characterization of sequence variability hotspots in Cranichideae plastomes (Orchidaceae, Orchidoideae)

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