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Empirical Assessment of RAD Sequencing for Interspecific Phylogeny
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/978-1-61779-228-1openalex-snapshot
Molecular Methods for Evolutionary Genetics
inferredcites →https://doi.org/10.1007/978-1-61779-228-1_9openalex-snapshot
SNP Discovery and Genotyping for Evolutionary Genetics Using RAD Sequencing
inferredcites →https://doi.org/10.1007/bf00160154openalex-snapshot
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
inferredcites →https://doi.org/10.1007/s10577-011-9231-6openalex-snapshot
New genome size estimates of 134 species of arthropods
inferredcites →https://doi.org/10.1016/j.ympev.2011.10.012openalex-snapshot
Next-generation sequencing reveals phylogeographic structure and a species tree for recent bird divergences
inferredcites →https://doi.org/10.1016/j.ympev.2011.12.007openalex-snapshot
Applications of next-generation sequencing to phylogeography and phylogenetics
inferredcites →https://doi.org/10.1016/j.ympev.2012.06.015openalex-snapshot
Molecular systematics and evolutionary history of the genus Carabus (Col. Carabidae)
inferredcites →https://doi.org/10.1046/j.1365-2583.2002.00355.xopenalex-snapshot
Comparison of EST libraries from seven beetle species: towards a framework for phylogenomics of the Coleoptera
inferredcites →https://doi.org/10.1046/j.1471-8286.2003.00519.xopenalex-snapshot
Evolutionary conservation and versatility of a new set of primers for amplifying the ribosomal internal transcribed spacer regions in insects and other invertebrates
inferredcites →https://doi.org/10.1080/10635150290069913openalex-snapshot
An Approximately Unbiased Test of Phylogenetic Tree Selection
inferredcites →https://doi.org/10.1080/10635150490423737openalex-snapshot
Single-Copy Nuclear Genes Recover Cretaceous-Age Divergences in Bees
inferredcites →https://doi.org/10.1093/bioinformatics/17.12.1246openalex-snapshot
CONSEL: for assessing the confidence of phylogenetic tree selection
inferredcites →https://doi.org/10.1093/bioinformatics/btl446openalex-snapshot
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
inferredcites →https://doi.org/10.1093/molbev/msr121openalex-snapshot
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
inferredcites →https://doi.org/10.1093/nar/gki198openalex-snapshot
MAFFT version 5: improvement in accuracy of multiple sequence alignment
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026201openalex-snapshot
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040235openalex-snapshot
Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites.
inferredcites →https://doi.org/10.1093/sysbio/50.1.39openalex-snapshot
Incongruence of Mitochondrial and Nuclear Gene Trees in the Carabid Beetles Ohomopterus
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05730.xopenalex-snapshot
Genome‐wide patterns of divergence and gene flow across a butterfly radiation
inferredcites →https://doi.org/10.1111/j.1479-8298.2012.00541.xopenalex-snapshot
Genome sizes of three species in the subtribe C arabina ( C oleoptera: C arabidae)
inferredcites →https://doi.org/10.1111/mec.12269openalex-snapshot
The evolutionary history of X iphophorus fish and their sexually selected sword: a genome‐wide approach using restriction site‐associated DNA sequencing
inferredcites →https://doi.org/10.1111/mec.12276openalex-snapshot
RAD seq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
inferredcites →https://doi.org/10.1146/annurev-ecolsys-110512-135822openalex-snapshot
High-Throughput Genomic Data in Systematics and Phylogenetics
inferredcites →https://doi.org/10.1186/bf03500878openalex-snapshot
Setting conservation priorities: the case study of Carabus solieri (Col. Carabidae)
inferredcites →https://doi.org/10.1371/journal.pbio.1000602openalex-snapshot
Resolving Difficult Phylogenetic Questions: Why More Sequences Are Not Enough
inferredcites →https://doi.org/10.1371/journal.pone.0003376openalex-snapshot
Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
inferredcites →https://doi.org/10.1371/journal.pone.0016607openalex-snapshot
Large Scale Loss of Data in Low-Diversity Illumina Sequencing Libraries Can Be Recovered by Deferred Cluster Calling
inferredcites →https://doi.org/10.1371/journal.pone.0019379openalex-snapshot
A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
inferredcites →https://doi.org/10.1371/journal.pone.0033394openalex-snapshot
Inferring Phylogenies from RAD Sequence Data
inferredcites →https://doi.org/10.1534/g3.111.000240openalex-snapshot
Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences
inferredcites →https://doi.org/10.5860/choice.39-2183openalex-snapshot
MacClade 4.0: analysis of phylogeny and character evolution
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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inferred← citeshttps://doi.org/10.1038/hdy.2014.105openalex-snapshot
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inferred← citeshttps://doi.org/10.3732/ajb.1500315openalex-snapshot
Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: A case study in Carex sect. Racemosae
inferred← citeshttps://doi.org/10.3732/ajb.1500519openalex-snapshot
Multiplexed shotgun genotyping resolves species relationships within the North American genus Penstemon
inferred← citeshttps://doi.org/10.70675/0dd95244z796bz45edz998cz93834a178085openalex-snapshot
Histoire évolutive des remaniements chromosomiques en liaison avec la mobilisation d'éléments transposables chez les téléostéens antarctiques Nototheniidae : la radiation adaptative du groupe " Trematomus "
inferred← citeshttps://doi.org/10.70675/2f7d72cfze196z4579zaefcz91632373ffd2openalex-snapshot
Unlocking the wild potential : integration of geographic differentiation in domestication processes to facilitate fish aquaculture diversification
inferred← citeshttps://doi.org/10.70675/471d1db2z2d6cz47e1z9450z321b9d09527copenalex-snapshot
Approche phylogénomique de la dynamique spatiale et temporelle de diversification chez les Lépidoptères Saturniidae
inferred← citeshttps://doi.org/10.70675/623f1e9cz015dz4ae3zacefzb980ab2f491dopenalex-snapshot
Connectivité et structure génétiques des populations d'Ericaria Zosteroides (Fucales) et Laminaria rodriguezii (Laminariales) des côtes françaises
inferred← citeshttps://doi.org/10.70675/6bac8de3z0b88z4e0dzbec7za7f96e119214openalex-snapshot
Divergence évolutive et isolement reproducteur chez les ascidies du genre Ciona, introduites et indigènes en Europe
inferred← citeshttps://doi.org/10.70675/7bbf91fbz2b4bz4cf9zb8a6z68f8049c4500openalex-snapshot
Structure and dynamics of the penguin synnomes : understanding seabird life history and response to climate change through population genomics
inferred← citeshttps://doi.org/10.70675/ddf2b383z5b34z4b52z87b4z9c68bd7b4bc5openalex-snapshot
Développement d’outils moléculaires au service de la systématique : application à des Ecdysozoaires parasites et vecteurs
inferred← citeshttps://doi.org/10.70675/e242eeaczdc27z404fz961cz3e14add5cb5dopenalex-snapshot
Phylogéographie et évolution moléculaire chez les Procellariiformes : apport à la diversification des oiseaux marins
inferred← citeshttps://doi.org/10.70675/eefe8a46ze06ez4614zb826z1d4b74134de3openalex-snapshot
Taxonomie intégrative, phylogénie et diversification des Turridae (Gastropoda, Conoidea)
inferred← citeshttps://doi.org/10.7287/peerj.5640v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Pushing the limits of whole genome amplification: successful sequencing of RADseq library from a single microhymenopteran (Chalcidoidea, Trichogramma) (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.5640v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Pushing the limits of whole genome amplification: successful sequencing of RADseq library from a single microhymenopteran (Chalcidoidea, Trichogramma) (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.5640v0.1/reviews/3openalex-snapshot
Peer Review #3 of "Pushing the limits of whole genome amplification: successful sequencing of RADseq library from a single microhymenopteran (Chalcidoidea, Trichogramma) (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.preprints.26939v1openalex-snapshot
Pushing the limits of whole genome amplification: Successful sequencing of RADseq libraries from single micro-hymenoptera (Chalcidoidea, Trichogramma)
inferred← citeshttps://doi.org/10.7717/peerj.20438openalex-snapshot
Phylogenetics within Camassia (Asparagaceae): examining difficult taxonomy and unusual variation using genomic restriction-site-associated DNA sequencing data
inferred← citeshttps://doi.org/10.7717/peerj.5640openalex-snapshot
Pushing the limits of whole genome amplification: successful sequencing of RADseq library from a single microhymenopteran (Chalcidoidea, Trichogramma )
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.