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Resolving Deep Nodes in an Ancient Radiation of Neotropical Fishes in the Presence of Conflicting Signals from Incomplete Lineage Sorting

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471650129.dob0522openalex-snapshot

PAUP * [Phylogenetic Analysis Using Parsimony (and Other Methods)]

inferredcites →https://doi.org/10.1007/0-387-28275-0_13openalex-snapshot

Diversity and Phylogeny of Neotropical Electric Fishes (Gymnotiformes)

inferredcites →https://doi.org/10.1007/bf00341112openalex-snapshot

Gas exchange and control of breathing in the electric eel, Electrophorus electricus

inferredcites →https://doi.org/10.1016/0025-5564(81)90043-2openalex-snapshot

Comparison of phylogenetic trees

inferredcites →https://doi.org/10.1016/bs.adgen.2017.09.007openalex-snapshot

Maximizing Power in Phylogenetics and Phylogenomics: A Perspective Illuminated by Fungal Big Data

inferredcites →https://doi.org/10.1016/j.cub.2017.03.027openalex-snapshot

Phylogenomic Insights into the Evolution of Stinging Wasps and the Origins of Ants and Bees

inferredcites →https://doi.org/10.1016/j.jphysparis.2008.10.008openalex-snapshot

Ontogeny and evolution of electric organs in gymnotiform fish

inferredcites →https://doi.org/10.1016/j.jphysparis.2016.10.002openalex-snapshot

Evolution of electric communication signals in the South American ghost knifefishes (Gymnotiformes: Apteronotidae): A phylogenetic comparative study using a sequence-based phylogeny

inferredcites →https://doi.org/10.1016/j.jtbi.2016.11.005openalex-snapshot

Species tree estimation using Neighbor Joining

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Phylogenomics: the beginning of incongruence?

inferredcites →https://doi.org/10.1016/j.tpb.2014.12.005openalex-snapshot

Likelihood-based tree reconstruction on a concatenation of aligned sequence data sets can be statistically inconsistent

inferredcites →https://doi.org/10.1016/j.tree.2007.01.012openalex-snapshot

Deciphering ancient rapid radiations

inferredcites →https://doi.org/10.1016/j.tree.2009.01.009openalex-snapshot

Gene tree discordance, phylogenetic inference and the multispecies coalescent

inferredcites →https://doi.org/10.1016/j.ympev.2009.05.033openalex-snapshot

Coalescent methods for estimating phylogenetic trees

inferredcites →https://doi.org/10.1016/j.ympev.2009.09.017openalex-snapshot

Phylogeny, biogeography, and electric signal evolution of Neotropical knifefishes of the genus Gymnotus (Osteichthyes: Gymnotidae)

inferredcites →https://doi.org/10.1016/j.ympev.2012.07.004openalex-snapshot

Full modeling versus summarizing gene-tree uncertainty: Method choice and species-tree accuracy

inferredcites →https://doi.org/10.1016/j.ympev.2013.02.008openalex-snapshot

Molecular dating of phylogenies by likelihood methods: A comparison of models and a new information criterion

inferredcites →https://doi.org/10.1016/j.ympev.2014.08.021openalex-snapshot

A confounding effect of missing data on character conflict in maximum likelihood and Bayesian MCMC phylogenetic analyses

inferredcites →https://doi.org/10.1016/j.ympev.2014.08.023openalex-snapshot

Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes (Serpentes: Caenophidia)

inferredcites →https://doi.org/10.1016/j.ympev.2015.05.027openalex-snapshot

Genome-wide ultraconserved elements exhibit higher phylogenetic informativeness than traditional gene markers in percomorph fishes

inferredcites →https://doi.org/10.1016/j.ympev.2015.07.018openalex-snapshot

The gene tree delusion

inferredcites →https://doi.org/10.1016/j.ympev.2015.11.007openalex-snapshot

Model-based total evidence phylogeny of Neotropical electric knifefishes (Teleostei, Gymnotiformes)

inferredcites →https://doi.org/10.1016/j.ympev.2017.02.017openalex-snapshot

New insights on the sister lineage of percomorph fishes with an anchored hybrid enrichment dataset

inferredcites →https://doi.org/10.1016/j.ympev.2018.03.033openalex-snapshot

Filtering nucleotide sites by phylogenetic signal to noise ratio increases confidence in the Neoaves phylogeny generated from ultraconserved elements

inferredcites →https://doi.org/10.1016/j.ympev.2018.07.018openalex-snapshot

Phylogenomic analysis on the exceptionally diverse fish clade Gobioidei (Actinopterygii: Gobiiformes) and data-filtering based on molecular clocklikeness

inferredcites →https://doi.org/10.1016/s0169-5347(01)02203-0openalex-snapshot

Gene trees and species trees are not the same

inferredcites →https://doi.org/10.1016/s0928-4257(03)00004-4openalex-snapshot

The evolutionary origins of electric signal complexity

inferredcites →https://doi.org/10.1016/s1546-5098(08)60051-5openalex-snapshot

Electric Organs

inferredcites →https://doi.org/10.1038/425782aopenalex-snapshot

Ending incongruence

inferredcites →https://doi.org/10.1038/nature02053openalex-snapshot

Genome-scale approaches to resolving incongruence in molecular phylogenies

inferredcites →https://doi.org/10.1038/nature12130openalex-snapshot

Inferring ancient divergences requires genes with strong phylogenetic signals

inferredcites →https://doi.org/10.1038/s41559-016-0020openalex-snapshot

Genome-wide interrogation advances resolution of recalcitrant groups in the tree of life

inferredcites →https://doi.org/10.1073/pnas.0607004104openalex-snapshot

High-resolution species trees without concatenation

inferredcites →https://doi.org/10.1073/pnas.1011803107openalex-snapshot

Old gene duplication facilitates origin and diversification of an innovative communication system—twice

inferredcites →https://doi.org/10.1073/pnas.1719358115openalex-snapshot

Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data

inferredcites →https://doi.org/10.1080/10635150390192771openalex-snapshot

Outgroup Misplacement and Phylogenetic Inaccuracy Under a Molecular Clock--A Simulation Study

inferredcites →https://doi.org/10.1080/10635150500234609openalex-snapshot

An Empirical Assessment of Long-Branch Attraction Artefacts in Deep Eukaryotic Phylogenomics

inferredcites →https://doi.org/10.1080/10635150500354928openalex-snapshot

Inferring Phylogeny Despite Incomplete Lineage Sorting

inferredcites →https://doi.org/10.1080/10635150601146041openalex-snapshot

Inconsistency of Phylogenetic Estimates from Concatenated Data under Coalescence

inferredcites →https://doi.org/10.1080/10635150701311362openalex-snapshot

Profiling Phylogenetic Informativeness

inferredcites →https://doi.org/10.1080/10635150802164587openalex-snapshot

Hemiplasy: A New Term in the Lexicon of Phylogenetics

inferredcites →https://doi.org/10.1080/23802359.2016.1174090openalex-snapshot

Mitochondrial genomes of the South American electric knifefishes (Order Gymnotiformes)

inferredcites →https://doi.org/10.1093/acprof:oso/9780195366723.001.0001openalex-snapshot

The Shocking History of Electric Fishes

inferredcites →https://doi.org/10.1093/bioinformatics/btg412openalex-snapshot

APE: Analyses of Phylogenetics and Evolution in R language

inferredcites →https://doi.org/10.1093/bioinformatics/bti079openalex-snapshot

HyPhy: hypothesis testing using phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btq062openalex-snapshot

Phybase: an R package for species tree analysis

inferredcites →https://doi.org/10.1093/bioinformatics/btq539openalex-snapshot

BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis

inferredcites →https://doi.org/10.1093/bioinformatics/btq706openalex-snapshot

phangorn: phylogenetic analysis in R

inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btv234openalex-snapshot

ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes

inferredcites →https://doi.org/10.1093/bioinformatics/btv646openalex-snapshot

PHYLUCE is a software package for the analysis of conserved genomic loci

inferredcites →https://doi.org/10.1093/gbe/evr105openalex-snapshot

Systematic Error in Seed Plant Phylogenomics

inferredcites →https://doi.org/10.1093/gbe/evx168openalex-snapshot

Investigating Difficult Nodes in the Placental Mammal Tree with Expanded Taxon Sampling and Thousands of Ultraconserved Elements

inferredcites →https://doi.org/10.1093/molbev/msl137openalex-snapshot

Lack of Resolution in the Animal Phylogeny: Closely Spaced Cladogeneses or Undetected Systematic Errors?

inferredcites →https://doi.org/10.1093/molbev/msl170openalex-snapshot

Bayesian Estimation of Concordance among Gene Trees

inferredcites →https://doi.org/10.1093/molbev/msm091openalex-snapshot

Phylogeny of Primary Photosynthetic Eukaryotes as Deduced from Slowly Evolving Nuclear Genes

inferredcites →https://doi.org/10.1093/molbev/msu236openalex-snapshot

ExaBayes: Massively Parallel Bayesian Tree Inference for the Whole-Genome Era

inferredcites →https://doi.org/10.1093/molbev/msu331openalex-snapshot

Coalescent Methods Are Robust to the Simultaneous Effects of Long Branches and Incomplete Lineage Sorting

inferredcites →https://doi.org/10.1093/molbev/msv347openalex-snapshot

Avoiding Missing Data Biases in Phylogenomic Inference: An Empirical Study in the Landfowl (Aves: Galliformes)

inferredcites →https://doi.org/10.1093/molbev/msw260openalex-snapshot

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

inferredcites →https://doi.org/10.1093/molbev/msy069openalex-snapshot

Estimating Improved Partitioning Schemes for Ultraconserved Elements

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003999openalex-snapshot

Rooting Phylogenetic Trees with Distant Outgroups: A Case Study from the Commelinoid Monocots

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040204openalex-snapshot

Phylogenetic analysis of the South American electric fishes (order Gymnotiformes) and the evolution of their electrogenic system: a synthesis based on morphology, electrophysiology, and mitochondrial sequence data.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040517openalex-snapshot

Relationships between gene trees and species trees.

inferredcites →https://doi.org/10.1093/sysbio/27.4.401openalex-snapshot

Cases in which Parsimony or Compatibility Methods will be Positively Misleading

inferredcites →https://doi.org/10.1093/sysbio/46.3.523openalex-snapshot

Gene Trees in Species Trees

inferredcites →https://doi.org/10.1093/sysbio/syq025openalex-snapshot

Optimal Selection of Gene and Ingroup Taxon Sampling for Resolving Phylogenetic Relationships

inferredcites →https://doi.org/10.1093/sysbio/syr003openalex-snapshot

Comparing Two Bayesian Methods for Gene Tree/Species Tree Reconstruction: Simulations with Incomplete Lineage Sorting and Horizontal Gene Transfer

inferredcites →https://doi.org/10.1093/sysbio/sys004openalex-snapshot

Ultraconserved Elements Anchor Thousands of Genetic Markers Spanning Multiple Evolutionary Timescales

inferredcites →https://doi.org/10.1093/sysbio/sys036openalex-snapshot

Phylogenetic Signal and Noise: Predicting the Power of a Data Set to Resolve Phylogeny

inferredcites →https://doi.org/10.1093/sysbio/syu046openalex-snapshot

Unforeseen Consequences of Excluding Missing Data from Next-Generation Sequences: Simulation Study of RAD Sequences

inferredcites →https://doi.org/10.1093/sysbio/syu063openalex-snapshot

Evaluating Summary Methods for Multilocus Species Tree Estimation in the Presence of Incomplete Lineage Sorting

inferredcites →https://doi.org/10.1093/sysbio/syu085openalex-snapshot

Practical Performance of Tree Comparison Metrics

inferredcites →https://doi.org/10.1093/sysbio/syv041openalex-snapshot

Can We Identify Genes with Increased Phylogenetic Reliability?

inferredcites →https://doi.org/10.1093/sysbio/syv058openalex-snapshot

How Should Genes and Taxa be Sampled for Phylogenomic Analyses with Missing Data? An Empirical Study in Iguanian Lizards

inferredcites →https://doi.org/10.1093/sysbio/syw014openalex-snapshot

Analysis of a Rapid Evolutionary Radiation Using Ultraconserved Elements: Evidence for a Bias in Some Multispecies Coalescent Methods

inferredcites →https://doi.org/10.1093/sysbio/syw089openalex-snapshot

Accounting for Uncertainty in Gene Tree Estimation: Summary-Coalescent Species Tree Inference in a Challenging Radiation of Australian Lizards

inferredcites →https://doi.org/10.1093/sysbio/syx038openalex-snapshot

Phylogenomic Systematics of Ostariophysan Fishes: Ultraconserved Elements Support the Surprising Non-Monophyly of Characiformes

inferredcites →https://doi.org/10.1093/sysbio/syx041openalex-snapshot

Why Do Phylogenomic Data Sets Yield Conflicting Trees? Data Type Influences the Avian Tree of Life more than Taxon Sampling

inferredcites →https://doi.org/10.1093/sysbio/syx077openalex-snapshot

To Include or Not to Include: The Impact of Gene Filtering on Species Tree Estimation Methods

inferredcites →https://doi.org/10.1101/012401openalex-snapshot

DensiTree 2: Seeing Trees Through the Forest

inferredcites →https://doi.org/10.1109/tcbb.2017.2757930openalex-snapshot

Species Tree Estimation Using ASTRAL: How Many Genes Are Enough?

inferredcites →https://doi.org/10.1111/ele.12423openalex-snapshot

Fossil‐based comparative analyses reveal ancient marine ancestry erased by extinction in ray‐finned fishes

inferredcites →https://doi.org/10.1111/evo.12047openalex-snapshot

MICROEVOLUTIONARY PROCESSES GENERATE PHYLOGENOMIC DISCORDANCE AT ANCIENT DIVERGENCES

inferredcites →https://doi.org/10.1111/evo.13010openalex-snapshot

Drift‐driven evolution of electric signals in a Neotropical knifefish

inferredcites →https://doi.org/10.1111/j.0014-3820.2003.tb00355.xopenalex-snapshot

THE SHAPES OF NEUTRAL GENE GENEALOGIES IN TWO SPECIES: PROBABILITIES OF MONOPHYLY, PARAPHYLY, AND POLYPHYLY IN A COALESCENT MODEL

inferredcites →https://doi.org/10.1111/j.1096-3642.1981.tb01575.xopenalex-snapshot

Interrelationships of the ostariophysan fishes (Teleostei)

inferredcites →https://doi.org/10.1111/j.1600-0633.2010.00422.xopenalex-snapshot

Life history trait diversity of native freshwater fishes in North America

inferredcites →https://doi.org/10.1111/jse.12160openalex-snapshot

Coalescent methods for estimating species trees from phylogenomic data

inferredcites →https://doi.org/10.1126/science.1254432openalex-snapshot

Genomic basis for the convergent evolution of electric organs

inferredcites →https://doi.org/10.1126/science.279.5350.505openalex-snapshot

The Coming of Age of Molecular Systematics

inferredcites →https://doi.org/10.1146/annurev.ecolsys.35.112202.130205openalex-snapshot

Phylogenomics

inferredcites →https://doi.org/10.1186/1471-2148-11-152openalex-snapshot

PhyDesign: an online application for profiling phylogenetic informativeness

inferredcites →https://doi.org/10.1186/1471-2148-14-82openalex-snapshot

Selecting optimal partitioning schemes for phylogenomic datasets

inferredcites →https://doi.org/10.1186/1471-2148-8-289openalex-snapshot

Bayesian inference of population size history from multiple loci

inferredcites →https://doi.org/10.1186/1471-2164-15-s6-s11openalex-snapshot

BBCA: Improving the scalability of *BEAST using random binning

inferredcites →https://doi.org/10.1186/s12862-015-0364-7openalex-snapshot

Utility of characters evolving at diverse rates of evolution to resolve quartet trees with unequal branch lengths: analytical predictions of long-branch effects

inferredcites →https://doi.org/10.1186/s12862-016-0837-3openalex-snapshot

PhyInformR: phylogenetic experimental design and phylogenomic data exploration in R

inferredcites →https://doi.org/10.1186/s12862-017-0893-3openalex-snapshot

Molecular evolution of globin genes in Gymnotiform electric fishes: relation to hypoxia tolerance

inferredcites →https://doi.org/10.1186/s12862-017-0958-3openalex-snapshot

Phylogenetic classification of bony fishes

inferredcites →https://doi.org/10.1201/9781420058093-16openalex-snapshot

Electroreception and Electrogenesis

inferredcites →https://doi.org/10.1201/b10194-6openalex-snapshot

The Fossil Record of Gonorynchiformes

inferredcites →https://doi.org/10.1201/b10194-7openalex-snapshot

Gonorynchiform Interrelationships: Historic Overview, Analysis, and Revised Systematics of the Group

inferredcites →https://doi.org/10.1242/jeb.083261openalex-snapshot

Proximate and ultimate causes of signal diversity in the electric fish Gymnotus

inferredcites →https://doi.org/10.1371/currents.tol.53ba26640df0ccaee75bb165c8c26288openalex-snapshot

The Tree of Life and a New Classification of Bony Fishes

inferredcites →https://doi.org/10.1371/journal.pbio.1000602openalex-snapshot

Resolving Difficult Phylogenetic Questions: Why More Sequences Are Not Enough

inferredcites →https://doi.org/10.1371/journal.pbio.1002224openalex-snapshot

The Dynamics of Incomplete Lineage Sorting across the Ancient Adaptive Radiation of Neoavian Birds

inferredcites →https://doi.org/10.1371/journal.pgen.0020068openalex-snapshot

Discordance of Species Trees with Their Most Likely Gene Trees

inferredcites →https://doi.org/10.1371/journal.pone.0036287openalex-snapshot

Comparable Ages for the Independent Origins of Electrogenesis in African and South American Weakly Electric Fishes

inferredcites →https://doi.org/10.1371/journal.pone.0054848openalex-snapshot

A Phylogeny of Birds Based on Over 1,500 Loci Collected by Target Enrichment and High-Throughput Sequencing

inferredcites →https://doi.org/10.1371/journal.pone.0065923openalex-snapshot

A Phylogenomic Perspective on the Radiation of Ray-Finned Fishes Based upon Targeted Sequencing of Ultraconserved Elements (UCEs)

inferredcites →https://doi.org/10.1371/journal.pone.0068719openalex-snapshot

The Untold Story of the Caudal Skeleton in the Electric Eel (Ostariophysi: Gymnotiformes: Electrophorus)

inferredcites →https://doi.org/10.1525/california/9780520268685.003.0010openalex-snapshot

An Ecological Perspective on Diversity and Distributions

inferredcites →https://doi.org/10.1643/cg-18-139openalex-snapshot

A Target Enrichment Bait Set for Studying Relationships among Ostariophysan Fishes

inferredcites →https://doi.org/10.2307/2412923openalex-snapshot

Cases in which Parsimony or Compatibility Methods Will be Positively Misleading

inferredcites →https://doi.org/10.2307/2992396openalex-snapshot

A Framework for the Quantitative Study of Evolutionary Trees

inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot

R: A Language and Environment for Statistical Computing

inferredcites →https://doi.org/10.3724/sp.j.1002.2008.08016openalex-snapshot

Taxon sampling and the accuracy of phylogenetic analyses

inferredcites →https://doi.org/10.48550/arxiv.1202.1215openalex-snapshot

TAPIR enables high-throughput estimation and comparison of phylogenetic informativeness using locus-specific substitution models

inferredcites →https://doi.org/10.5860/choice.49-3863openalex-snapshot

The shocking history of electric fishes: from ancient epochs to the birth of modern neurophysiology

inferredcites →https://doi.org/10.5962/p.210846openalex-snapshot

A comparison of length and voltage in the electric eel, Electrophorus electricus (Linnaeus)

inferredcites →https://doi.org/10.7287/peerj.preprints.26449v3openalex-snapshot

Embracing heterogeneity: Building the Tree of Life and the future of phylogenomics

inferredcites →https://doi.org/10.7717/peerj.6399openalex-snapshot

Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1038/s41598-020-59519-wopenalex-snapshot

Phylogenomic analysis of trichomycterid catfishes (Teleostei: Siluriformes) inferred from ultraconserved elements

inferred← citeshttps://doi.org/10.1038/s41598-025-16399-2openalex-snapshot

Identifying sets of phylogenetically informative markers for Anastrepha (Diptera: Tephritidae)

inferred← citeshttps://doi.org/10.1080/14772000.2022.2032460openalex-snapshot

Systematics of Neotropical electric knifefishTembeassu(Gymnotiformes, Apteronotidae)

inferred← citeshttps://doi.org/10.1080/14772000.2025.2560311openalex-snapshot

Molecular systematics and biogeography of a new rheophilic species of ghost electric fish (Gymnotiformes: Apteronotidae: Porotergus ) from the eastern Guianas

inferred← citeshttps://doi.org/10.1093/gbe/evab161openalex-snapshot

Comparing Ultraconserved Elements and Exons for Phylogenomic Analyses of Middle American Cichlids: When Data Agree to Disagree

inferred← citeshttps://doi.org/10.1093/gbe/evad094openalex-snapshot

“Correcting” Gene Trees to be More Like Species Trees Frequently Increases Topological Error

inferred← citeshttps://doi.org/10.1093/icb/icac035openalex-snapshot

Sex-Differences in Phenology: A Tinbergian Perspective

inferred← citeshttps://doi.org/10.1093/isd/ixz016openalex-snapshot

Understanding UCEs: A Comprehensive Primer on Using Ultraconserved Elements for Arthropod Phylogenomics

inferred← citeshttps://doi.org/10.1093/molbev/msab151openalex-snapshot

Phylogenomic Subsampling and the Search for Phylogenetically Reliable Loci

inferred← citeshttps://doi.org/10.1093/sysbio/syaa066openalex-snapshot

Disentangling Sources of Gene Tree Discordance in Phylogenomic Data Sets: Testing Ancient Hybridizations in Amaranthaceae s.l

inferred← citeshttps://doi.org/10.1093/sysbio/syaa084openalex-snapshot

The Multilocus Multispecies Coalescent: A Flexible New Model of Gene Family Evolution

inferred← citeshttps://doi.org/10.1093/sysbio/syaa101openalex-snapshot

Integrating Sequence Capture and Restriction Site-Associated DNA Sequencing to Resolve Recent Radiations of Pelagic Seabirds

inferred← citeshttps://doi.org/10.1093/sysbio/syab013openalex-snapshot

Interrogating Phylogenetic Discordance Resolves Deep Splits in the Rapid Radiation of Old World Fruit Bats (Chiroptera: Pteropodidae)

inferred← citeshttps://doi.org/10.1093/sysbio/syab040openalex-snapshot

Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes

inferred← citeshttps://doi.org/10.1093/sysbio/syab094openalex-snapshot

Whole-Genome Phylogenetic Reconstruction as a Powerful Tool to Reveal Homoplasy and Ancient Rapid Radiation in Waterflea Evolution

inferred← citeshttps://doi.org/10.1093/sysbio/syad008openalex-snapshot

Ancient Rapid Radiation Explains Most Conflicts Among Gene Trees and Well-Supported Phylogenomic Trees of Nostocalean Cyanobacteria

inferred← citeshttps://doi.org/10.1093/sysbio/syae065openalex-snapshot

Robustness of divergence time estimation despite gene tree estimation error: a case study of fireflies (Coleoptera: Lampyridae)

inferred← citeshttps://doi.org/10.1093/sysbio/syaf032openalex-snapshot

Phylogenomic and Population Genomic Analyses of Ultraconserved Elements Reveal Deep Coalescence and Introgression Shaped Diversification Patterns in Lamprologine Cichlids of the Congo River

inferred← citeshttps://doi.org/10.1098/rsos.240064openalex-snapshot

Novel phylogenomic inference and ‘Out of Asia’ biogeography of cobras, coral snakes and their allies

inferred← citeshttps://doi.org/10.1101/2021.07.27.453752openalex-snapshot

Substitution Rate Variation in a Robust Procellariiform Seabird Phylogeny is not Solely Explained by Body Mass, Flight Efficiency, Population Size or Life History Traits

inferred← citeshttps://doi.org/10.1101/2021.11.19.469195openalex-snapshot

A Time-calibrated Firefly (Coleoptera: Lampyridae) Phylogeny: Using Genomic Data for Divergence Time Estimation

inferred← citeshttps://doi.org/10.1101/2022.07.20.500819openalex-snapshot

Phylogenomics of trans -Andean tetras of the genus Hyphessobrycon Durbin 1908 and colonization patterns of Middle America

inferred← citeshttps://doi.org/10.1101/2022.08.21.504711openalex-snapshot

“Correcting” gene trees to be more like species trees increases topological error when incomplete lineage sorting is high

inferred← citeshttps://doi.org/10.1101/794370openalex-snapshot

Disentangling Sources of Gene Tree Discordance in Phylogenomic Datasets: Testing Ancient Hybridizations in Amaranthaceae s.l

inferred← citeshttps://doi.org/10.1111/cla.12551openalex-snapshot

Congruence between ultraconserved element‐based matrices and phylotranscriptomic datasets in the scorpion Tree of Life

inferred← citeshttps://doi.org/10.1111/jbi.15129openalex-snapshot

Landscape Evolution Drives Continental Diversification in Neotropical Freshwater Fishes of the Family Erythrinidae (Teleostei, Characiformes)

inferred← citeshttps://doi.org/10.1111/jbi.70362openalex-snapshot

Phylogeographic Patterns of the Eigenmannia humboldtii Group Shaped by Miocene‐Pleistocene Transitions

inferred← citeshttps://doi.org/10.1111/jse.12708openalex-snapshot

Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants

inferred← citeshttps://doi.org/10.1111/jzs.12535openalex-snapshot

Morphology‐based phylogeny of Eigenmanniinae Mago‐Leccia, 1978 (Teleostei: Gymnotiformes: Sternopygidae), with a new classification

inferred← citeshttps://doi.org/10.1111/syen.12657openalex-snapshot

Lacewing‐specific Universal Single Copy Orthologs designed towards resolution of backbone phylogeny of Neuropterida

inferred← citeshttps://doi.org/10.1111/zsc.12582openalex-snapshot

Phylogeny of Urostylididae (Heteroptera: Pentatomoidea) reveals rapid radiation and challenges traditional classification

inferred← citeshttps://doi.org/10.1126/sciadv.abm2970openalex-snapshot

Divergent cis-regulatory evolution underlies the convergent loss of sodium channel expression in electric fish

inferred← citeshttps://doi.org/10.1126/science.abn4409openalex-snapshot

Pervasive incomplete lineage sorting illuminates speciation and selection in primates

inferred← citeshttps://doi.org/10.1146/annurev-ecolsys-011620-031032openalex-snapshot

Diversification of Neotropical Freshwater Fishes

inferred← citeshttps://doi.org/10.11606/t.41.2020.tde-16122019-135409openalex-snapshot

Biogeografia e filogeografia comparada das aves do Centro de Endemismo Pernambuco utilizando Elementos Ultra Conservados (UCEs)

inferred← citeshttps://doi.org/10.1242/jeb.242400openalex-snapshot

Derived loss of signal complexity and plasticity in a genus of weakly electric fish

inferred← citeshttps://doi.org/10.1371/journal.pgen.1010836openalex-snapshot

TRAILS: Tree reconstruction of ancestry using incomplete lineage sorting

inferred← citeshttps://doi.org/10.1371/journal.pone.0279924openalex-snapshot

Phylogenomics of trans-Andean tetras of the genus Hyphessobrycon Durbin 1908 (Stethaprioninae: Characidae) and colonization patterns of Middle America

inferred← citeshttps://doi.org/10.1590/1809-4392202103601openalex-snapshot

Evolution of Amazonian biodiversity: A review

inferred← citeshttps://doi.org/10.1590/1982-0224-2019-0132openalex-snapshot

Feeding ecology of electric eel Electrophorus varii (Gymnotiformes: Gymnotidae) in the Curiaú River Basin, Eastern Amazon

inferred← citeshttps://doi.org/10.1590/1982-0224-2021-0009openalex-snapshot

Patterns of diversification and phylogenetic structure in the dorsolateral head musculature of Neotropical electric eels (Ostariophysi: Gymnotiformes), with a myological synonymy

inferred← citeshttps://doi.org/10.1590/1982-0224-2021-0117openalex-snapshot

Description of three new species of Eigenmannia (Gymnotiformes: Sternopygidae) from the rio Mearim and rio Parnaíba basins, Northeastern Brazil

inferred← citeshttps://doi.org/10.1643/cg-18-139openalex-snapshot

A Target Enrichment Bait Set for Studying Relationships among Ostariophysan Fishes

inferred← citeshttps://doi.org/10.1643/i2021126openalex-snapshot

Phylogeny Reconciles Classification in Antarctic Plunderfishes

inferred← citeshttps://doi.org/10.1643/i2024068openalex-snapshot

A New Species of Sternarchorhynchus (Gymnotiformes: Apteronotidae) from the Guayabero River, Orinoco Basin, Colombia, with Comments on the Phylogeny of the Genus

inferred← citeshttps://doi.org/10.2139/ssrn.7333700openalex-snapshot

Phylogenomic relationships and species delimitation in a diverse clade of Amazonian electric fishes reveal deep phenotypic conservatism and superficial homoplasy

inferred← citeshttps://doi.org/10.31390/gradschool_dissertations.5929openalex-snapshot

Evolution of Freshwater Fishes in the Northern Neotropics

inferred← citeshttps://doi.org/10.3374/014.065.0101openalex-snapshot

Phylogenetic Classification of Living and Fossil Ray-Finned Fishes (Actinopterygii)

inferred← citeshttps://doi.org/10.3389/fevo.2022.924860openalex-snapshot

Paleogene emergence and evolutionary history of the Amazonian fossorial fish genus Tarumania (Teleostei: Tarumaniidae)

inferred← citeshttps://doi.org/10.3390/ijms20174296openalex-snapshot

Deciphering the Evolutionary History of Arowana Fishes (Teleostei, Osteoglossiformes, Osteoglossidae): Insight from Comparative Cytogenomics

inferred← citeshttps://doi.org/10.3390/taxonomy5020033openalex-snapshot

Biodiversity, Systematics, and Taxonomy of Ostariophysi (Osteichthyes, Actinopterygii): What We Know Today After Three Decades of Integration of Morphological and Molecular Data

inferred← citeshttps://doi.org/10.4257/oeco.2021.2502.01openalex-snapshot

TAXONOMIA E FILOGENIA DE PEIXES DE RIACHOS BRASILEIROS

inferred← citeshttps://doi.org/10.64898/2026.08.25.747131openalex-snapshot

The largest radiations of freshwater fishes initiated at the Cretaceous-Paleogene boundary

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