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Coalescent versus Concatenation Methods and the Placement of Amborella as Sister to Water Lilies

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Outgoing claims: the papers this work cites, builds on, or argues with.

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The phylogenetic handbook: A practical approach to DNA and protein phylogeny
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Angiosperm phylogeny inferred from 18S rDNA, rbcL, and atpB sequences
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Ancient Phylogenetic Relationships
inferredcites →https://doi.org/10.1007/bf02715890openalex-snapshot
Comparative studies on codon usage pattern of chloroplasts and their host nuclear genes in four plant species
inferredcites →https://doi.org/10.1007/s00239-009-9206-9openalex-snapshot
Removal of Noisy Characters from Chloroplast Genome-Scale Data Suggests Revision of Phylogenetic Placements of Amborella and Ceratophyllum
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Automated Removal of Noisy Data in Phylogenomic Analyses
inferredcites →https://doi.org/10.1016/0169-5347(96)10006-9openalex-snapshot
Combining data in phylogenetic analysis
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Evolution of Protein Molecules
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Multigene Phylogeny of the Green Lineage Reveals the Origin and Diversification of Land Plants
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Testing regions with nonsmooth boundaries via multiscale bootstrap
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Origin of land plants using the multispecies coalescent model
inferredcites →https://doi.org/10.1016/j.tree.2007.01.012openalex-snapshot
Deciphering ancient rapid radiations
inferredcites →https://doi.org/10.1016/j.ympev.2009.05.033openalex-snapshot
Coalescent methods for estimating phylogenetic trees
inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot
Basic Local Alignment Search Tool
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Multigene analyses identify the three earliest lineages of extant flowering plants
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An index of substitution saturation and its application
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Angiosperm phylogeny inferred from multiple genes as a tool for comparative biology
inferredcites →https://doi.org/10.1038/46536openalex-snapshot
The earliest angiosperms: evidence from mitochondrial, plastid and nuclear genomes
inferredcites →https://doi.org/10.1038/nature01521openalex-snapshot
Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
inferredcites →https://doi.org/10.1038/nature04690openalex-snapshot
Embryological evidence for developmental lability during early angiosperm evolution
inferredcites →https://doi.org/10.1038/nature06614openalex-snapshot
Broad phylogenomic sampling improves resolution of the animal tree of life
inferredcites →https://doi.org/10.1038/nature09916openalex-snapshot
Ancestral polyploidy in seed plants and angiosperms
inferredcites →https://doi.org/10.1038/ng.740openalex-snapshot
The genome of woodland strawberry (Fragaria vesca)
inferredcites →https://doi.org/10.1073/pnas.0708072104openalex-snapshot
Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms
inferredcites →https://doi.org/10.1073/pnas.0709121104openalex-snapshot
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
inferredcites →https://doi.org/10.1073/pnas.0813376106openalex-snapshot
Rosid radiation and the rapid rise of angiosperm-dominated forests
inferredcites →https://doi.org/10.1073/pnas.0907801107openalex-snapshot
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots
inferredcites →https://doi.org/10.1073/pnas.0908007107openalex-snapshot
Angiosperm genome comparisons reveal early polyploidy in the monocot lineage
inferredcites →https://doi.org/10.1073/pnas.092136399openalex-snapshot
The root of the angiosperms revisited
inferredcites →https://doi.org/10.1073/pnas.1001225107openalex-snapshot
An uncorrelated relaxed-clock analysis suggests an earlier origin for flowering plants
inferredcites →https://doi.org/10.1073/pnas.1211733109openalex-snapshot
Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
inferredcites →https://doi.org/10.1073/pnas.220427497openalex-snapshot
Independent and combined analyses of sequences from all three genomic compartments converge on the root of flowering plant phylogeny
inferredcites →https://doi.org/10.1073/pnas.96.2.580openalex-snapshot
Microsporidia are related to Fungi: Evidence from the largest subunit of RNA polymerase II and other proteins
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An Approximately Unbiased Test of Phylogenetic Tree Selection
inferredcites →https://doi.org/10.1080/10635150490445779openalex-snapshot
Modeling Compositional Heterogeneity
inferredcites →https://doi.org/10.1080/10635150490468648openalex-snapshot
The Biasing Effect of Compositional Heterogeneity on Phylogenetic Estimates May be Underestimated
inferredcites →https://doi.org/10.1080/10635150490888877openalex-snapshot
Identifying and Removing Fast-Evolving Sites Using Compatibility Analysis: An Example from the Arthropoda
inferredcites →https://doi.org/10.1080/10635150500234609openalex-snapshot
An Empirical Assessment of Long-Branch Attraction Artefacts in Deep Eukaryotic Phylogenomics
inferredcites →https://doi.org/10.1080/10635150590945359openalex-snapshot
Placing Paleopolyploidy in Relation to Taxon Divergence: A Phylogenetic Analysis in Legumes Using 39 Gene Families
inferredcites →https://doi.org/10.1080/10635150600975218openalex-snapshot
Efficient Likelihood Computations with Nonreversible Models of Evolution
inferredcites →https://doi.org/10.1080/10635150601146041openalex-snapshot
Inconsistency of Phylogenetic Estimates from Concatenated Data under Coalescence
inferredcites →https://doi.org/10.1080/10635150701429982openalex-snapshot
Species Trees from Gene Trees: Reconstructing Bayesian Posterior Distributions of a Species Phylogeny Using Estimated Gene Tree Distributions
inferredcites →https://doi.org/10.1080/10635150801905535openalex-snapshot
Discordance of Species Trees with Their Most Likely Gene Trees: The Case of Five Taxa
inferredcites →https://doi.org/10.1086/317584openalex-snapshot
Phylogeny of Basal Angiosperms: Analyses of Five Genes from Three Genomes
inferredcites →https://doi.org/10.1086/431800openalex-snapshot
Phylogenetic Analyses of Basal Angiosperms Based on Nine Plastid, Mitochondrial, and Nuclear Genes
inferredcites →https://doi.org/10.1086/509788openalex-snapshot
A 567‐Taxon Data Set for Angiosperms: The Challenges Posed by Bayesian Analyses of Large Data Sets
inferredcites →https://doi.org/10.1086/658923openalex-snapshot
Phylogenetic Analysis of the Plastid Inverted Repeat for 244 Species: Insights into Deeper-Level Angiosperm Relationships from a Long, Slowly Evolving Sequence Region
inferredcites →https://doi.org/10.1086/675935openalex-snapshot
Integrating Early Cretaceous Fossils into the Phylogeny of Living Angiosperms: ANITA Lines and Relatives of Chloranthaceae
inferredcites →https://doi.org/10.1093/bioinformatics/13.3.235openalex-snapshot
Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
inferredcites →https://doi.org/10.1093/bioinformatics/btl446openalex-snapshot
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
inferredcites →https://doi.org/10.1093/bioinformatics/btm619openalex-snapshot
Phyutility: a phyloinformatics tool for trees, alignments and molecular data
inferredcites →https://doi.org/10.1093/bioinformatics/btp079openalex-snapshot
STEM: species tree estimation using maximum likelihood for gene trees under coalescence
inferredcites →https://doi.org/10.1093/bioinformatics/btp348openalex-snapshot
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
inferredcites →https://doi.org/10.1093/bioinformatics/btq062openalex-snapshot
Phybase: an R package for species tree analysis
inferredcites →https://doi.org/10.1093/gbe/evr105openalex-snapshot
Systematic Error in Seed Plant Phylogenomics
inferredcites →https://doi.org/10.1093/genetics/164.4.1645openalex-snapshot
Bayes Estimation of Species Divergence Times and Ancestral Population Sizes Using DNA Sequences From Multiple Loci
inferredcites →https://doi.org/10.1093/jhered/92.4.371openalex-snapshot
DAMBE: Software Package for Data Analysis in Molecular Biology and Evolution
inferredcites →https://doi.org/10.1093/molbev/msh112openalex-snapshot
A Bayesian Mixture Model for Across-Site Heterogeneities in the Amino-Acid Replacement Process
inferredcites →https://doi.org/10.1093/molbev/msn043openalex-snapshot
Calculating Bootstrap Probabilities of Phylogeny Using Multilocus Sequence Data
inferredcites →https://doi.org/10.1093/molbev/msp274openalex-snapshot
Bayesian Inference of Species Trees from Multilocus Data
inferredcites →https://doi.org/10.1093/molbev/msq097openalex-snapshot
Compositional Heterogeneity and Phylogenomic Inference of Metazoan Relationships
inferredcites →https://doi.org/10.1093/nar/30.7.1575openalex-snapshot
An efficient algorithm for large-scale detection of protein families
inferredcites →https://doi.org/10.1093/nar/gkh340openalex-snapshot
MUSCLE: multiple sequence alignment with high accuracy and high throughput
inferredcites →https://doi.org/10.1093/nar/gkl315openalex-snapshot
PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments
inferredcites →https://doi.org/10.1093/nar/gkm1041openalex-snapshot
PlantGDB: a resource for comparative plant genomics
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003874openalex-snapshot
Effects of Nucleotide Composition Bias on the Success of the Parsimony Criterion in Phylogenetic Inference
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025991openalex-snapshot
Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026166openalex-snapshot
Archaea sister group of Bacteria? Indications from tree reconstruction artifacts in ancient phylogenies
inferredcites →https://doi.org/10.1093/sysbio/27.4.401openalex-snapshot
Cases in which Parsimony or Compatibility Methods will be Positively Misleading
inferredcites →https://doi.org/10.1093/sysbio/syp031openalex-snapshot
Estimating Species Phylogenies Using Coalescence Times among Sequences
inferredcites →https://doi.org/10.1093/sysbio/syp034openalex-snapshot
Phylogenetic Analysis in the Anomaly Zone
inferredcites →https://doi.org/10.1093/sysbio/syp037openalex-snapshot
Nonstationary Evolution and Compositional Heterogeneity in Beetle Mitochondrial Phylogenomics
inferredcites →https://doi.org/10.1093/sysbio/syp047openalex-snapshot
What Is the Danger of the Anomaly Zone for Empirical Phylogenetics?
inferredcites →https://doi.org/10.1093/sysbio/syq010openalex-snapshot
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
inferredcites →https://doi.org/10.1093/sysbio/syr064openalex-snapshot
A Method for Inferring the Rate of Evolution of Homologous Characters that Can Potentially Improve Phylogenetic Inference, Resolve Deep Divergence and Correct Systematic Biases
inferredcites →https://doi.org/10.1093/sysbio/sys070openalex-snapshot
The Evolutionary Root of Flowering Plants
inferredcites →https://doi.org/10.1093/sysbio/syt022openalex-snapshot
PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment
inferredcites →https://doi.org/10.1093/sysbio/syt039openalex-snapshot
Addressing Gene Tree Discordance and Non-Stationarity to Resolve a Multi-Locus Phylogeny of the Flatfishes (Teleostei: Pleuronectiformes)
inferredcites →https://doi.org/10.1093/sysbio/syt108openalex-snapshot
Another Look at the Root of the Angiosperms Reveals a Familiar Tale
inferredcites →https://doi.org/10.1098/rspb.2000.1130openalex-snapshot
Early–branching or fast–evolving eukaryotes? An answer based on slowly evolving positions
inferredcites →https://doi.org/10.1098/rspb.2001.1782openalex-snapshot
Evolution of the angiosperms: calibrating the family tree
inferredcites →https://doi.org/10.1098/rspb.2009.0896openalex-snapshot
Assessing the root of bilaterian animals with scalable phylogenomic methods
inferredcites →https://doi.org/10.1101/sqb.1987.052.01.090openalex-snapshot
Earliest Phylogenetic Branchings: Comparing rRNA-based Evolutionary Trees Inferred with Various Techniques
inferredcites →https://doi.org/10.1111/boj.12385openalex-snapshot
An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV
inferredcites →https://doi.org/10.1111/j.1095-8339.2009.00996.xopenalex-snapshot
An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III
inferredcites →https://doi.org/10.1111/j.1469-8137.2012.04212.xopenalex-snapshot
Highly conserved low‐copy nuclear genes as effective markers for phylogenetic analyses in angiosperms
inferredcites →https://doi.org/10.1111/j.1558-5646.2011.01476.xopenalex-snapshot
COALESCENT-BASED SPECIES TREE INFERENCE FROM GENE TREE TOPOLOGIES UNDER INCOMPLETE LINEAGE SORTING BY MAXIMUM LIKELIHOOD
inferredcites →https://doi.org/10.1111/j.1759-6831.2010.00097.xopenalex-snapshot
Angiosperm phylogeny inferred from sequences of four mitochondrial genes
inferredcites →https://doi.org/10.1126/science.1241089openalex-snapshot
The Amborella Genome and the Evolution of Flowering Plants
inferredcites →https://doi.org/10.1126/science.286.5441.947openalex-snapshot
The Root of Angiosperm Phylogeny Inferred from Duplicate Phytochrome Genes
inferredcites →https://doi.org/10.1146/annurev-earth-042711-105313openalex-snapshot
Molecular and Fossil Evidence on the Origin of Angiosperms
inferredcites →https://doi.org/10.1186/1471-2105-5-187openalex-snapshot
prot4EST: Translating Expressed Sequence Tags from neglected genomes
inferredcites →https://doi.org/10.1186/1471-2148-10-302openalex-snapshot
A maximum pseudo-likelihood approach for estimating species trees under the coalescent model
inferredcites →https://doi.org/10.1186/1471-2148-11-104openalex-snapshot
Origin of land plants: Do conjugating green algae hold the key?
inferredcites →https://doi.org/10.1186/1471-2148-4-35openalex-snapshot
Long branch attraction, taxon sampling, and the earliest angiosperms: Amborella or monocots?
inferredcites →https://doi.org/10.1186/1471-2164-10-45openalex-snapshot
An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes.
inferredcites →https://doi.org/10.1186/1741-7007-9-91openalex-snapshot
Difficult phylogenetic questions: more data, maybe; better methods, certainly
inferredcites →https://doi.org/10.1186/gb-2012-13-1-r3openalex-snapshot
A genome triplication associated with early diversification of the core eudicots
inferredcites →https://doi.org/10.1196/annals.1438.005openalex-snapshot
Origin and Early Evolution of Angiosperms
inferredcites →https://doi.org/10.1371/journal.pbio.1000602openalex-snapshot
Resolving Difficult Phylogenetic Questions: Why More Sequences Are Not Enough
inferredcites →https://doi.org/10.1371/journal.pgen.0020068openalex-snapshot
Discordance of Species Trees with Their Most Likely Gene Trees
inferredcites →https://doi.org/10.1371/journal.pgen.1002411openalex-snapshot
A Functional Phylogenomic View of the Seed Plants
inferredcites →https://doi.org/10.1371/journal.pone.0080870openalex-snapshot
Phylogenomics and Coalescent Analyses Resolve Extant Seed Plant Relationships
inferredcites →https://doi.org/10.2307/2412923openalex-snapshot
Cases in which Parsimony or Compatibility Methods Will be Positively Misleading
inferredcites →https://doi.org/10.3732/ajb.0800060openalex-snapshot
Angiosperm diversification through time
inferredcites →https://doi.org/10.3732/ajb.0800311openalex-snapshot
Reconstructing the ancestral female gametophyte of angiosperms: Insights from Amborella and other ancient lineages of flowering plants
inferredcites →https://doi.org/10.3732/ajb.0900346openalex-snapshot
The age and diversification of the angiosperms re‐revisited
inferredcites →https://doi.org/10.3732/ajb.1000404openalex-snapshot
Angiosperm phylogeny: 17 genes, 640 taxa
inferredcites →https://doi.org/10.3732/ajb.91.10.1599openalex-snapshot
Phylogenetic signal in nucleotide data from seed plants: implications for resolving the seed plant tree of life
inferredcites →https://doi.org/10.3732/ajb.91.6.997openalex-snapshot
Amborella not a “basal angiosperm”? Not so fast

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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A subgeneric revision of the genus Suillus (Suillaceae, Boletales) and novel taxa from Eastern Asia based on morphology and multigene phylogenies
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Ancestral traits and specializations in the flowers of the basal grade of living angiosperms
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A mborella– Bearing Witness to the Past?
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Quartet Sampling distinguishes lack of support from conflicting support in the green plant tree of life
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Character evolution and missing (morphological) data across Asteridae
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A matter of phylogenetic scale: Distinguishing incomplete lineage sorting from lateral gene transfer as the cause of gene tree discord in recent versus deep diversification histories
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Revisiting phylogeny, systematics, and biogeography of a Pleistocene radiation
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Joining forces in Ochnaceae phylogenomics: a tale of two targeted sequencing probe kits
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Molecular insights on the conflicting generic boundaries in the Carduncellus‐Carthamus complex (Compositae)
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QT-GILD: Quartet Based Gene Tree Imputation Using Deep Learning Improves Phylogenomic Analyses Despite Missing Data
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On the Robustness to Gene Tree Rooting (or Lack Thereof) of Triplet-Based Species Tree Estimation Methods
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Accumulated Coalescence Rank and Excess Gene Count for Species Tree Inference
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IDXL: Species Tree Inference Using Internode Distance and Excess Gene Leaf Count
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Spatial transmission of H5N6 highly pathogenic avian influenza viruses among wild birds in Ibaraki Prefecture, Japan, 2016–2017
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Comparative analysis of 12 water lily plastid genomes reveals genomic divergence and evolutionary relationships in early flowering plants
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Plumage assisted divergence in a vocally complex island endemic: The Dicrurus paradiseus species complex in Sri Lanka
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Phylogenomic Insights into Deep Phylogeny of Angiosperms Based on Broad Nuclear Gene Sampling
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Deep phylogenetic incongruence in the angiosperm clade Rosidae
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Multilocus species tree analyses resolve the ancient radiation of the subtribe Zizaniinae (Poaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.05.011openalex-snapshot
Coalescence vs. concatenation: Sophisticated analyses vs. first principles applied to rooting the angiosperms
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.06.009openalex-snapshot
Genes with minimal phylogenetic information are problematic for coalescent analyses when gene tree estimation is biased
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The gene tree delusion
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Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics
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The effects of subsampling gene trees on coalescent methods applied to ancient divergences
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Biases of tree-independent-character-subsampling methods
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Phylogenomic analyses of large-scale nuclear genes provide new insights into the evolutionary relationships within the rosids
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Resolving interspecific relationships within evolutionarily young lineages using RNA-seq data: An example from Pedicularis section Cyathophora (Orobanchaceae)
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In the shadows: Phylogenomics and coalescent species delimitation unveil cryptic diversity in a Cerrado endemic lizard (Squamata: Tropidurus)
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Systematics and biogeography of the Automolus infuscatus complex (Aves; Furnariidae): Cryptic diversity reveals western Amazonia as the origin of a transcontinental radiation
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A pilot study applying the plant Anchored Hybrid Enrichment method to New World sages (Salvia subgenus Calosphace; Lamiaceae)
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Multi-locus phylogenetic analysis of the genus Limnodrilus (Annelida: Clitellata: Naididae)
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Inferring rooted species trees from unrooted gene trees using approximate Bayesian computation
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Assessing the utility of transcriptome data for inferring phylogenetic relationships among coleoid cephalopods
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Cryptic diversity in Rhampholeon boulengeri (Sauria: Chamaeleonidae), a pygmy chameleon from the Albertine Rift biodiversity hotspot
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Exploring data processing strategies in NGS target enrichment to disentangle radiations in the tribe Cardueae (Compositae)
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Gene-wise resampling outperforms site-wise resampling in phylogenetic coalescence analyses
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Partitioned coalescence support reveals biases in species-tree methods and detects gene trees that determine phylogenomic conflicts
inferred← citeshttps://doi.org/10.1016/j.ympev.2019.106540openalex-snapshot
Phylogenomics of Orchidaceae based on plastid and mitochondrial genomes
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A phylogenomic analysis of Nepenthes (Nepenthaceae)
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Phylogenomic insights into the temporal-spatial divergence history, evolution of leaf habit and hybridization in Stachyurus (Stachyuraceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107092openalex-snapshot
Collapsing dubiously resolved gene-tree branches in phylogenomic coalescent analyses
inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107344openalex-snapshot
Gene-tree misrooting drives conflicts in phylogenomic coalescent analyses of palaeognath birds
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Disentangling sources of gene tree discordance for Hordeum species via target-enriched sequencing assays
inferred← citeshttps://doi.org/10.1016/j.ympev.2025.108454openalex-snapshot
Widespread incongruence in the phylogenomics of the ancient land plant lineage, Selaginellaceae (lycophytes)
inferred← citeshttps://doi.org/10.1017/cbo9781316338797.015openalex-snapshot
Molecular data in systematics: a promise fulfilled, a future beckoning
inferred← citeshttps://doi.org/10.1038/hortres.2017.51openalex-snapshot
Water lilies as emerging models for Darwin’s abominable mystery
inferred← citeshttps://doi.org/10.1038/ncomms6134openalex-snapshot
Extant diversity of bryophytes emerged from successive post-Mesozoic diversification bursts
inferred← citeshttps://doi.org/10.1038/s41467-019-11943-xopenalex-snapshot
Environmental temperatures shape thermal physiology as well as diversification and genome-wide substitution rates in lizards
inferred← citeshttps://doi.org/10.1038/s41477-024-01830-9openalex-snapshot
Unlocking Amborella’s ZW sex chromosome system
inferred← citeshttps://doi.org/10.1038/s41598-017-13236-zopenalex-snapshot
Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogenetic Tree of the Paniceae Grasses
inferred← citeshttps://doi.org/10.1038/s41598-019-45455-xopenalex-snapshot
Multiple historical processes obscure phylogenetic relationships in a taxonomically difficult group (Lobariaceae, Ascomycota)
inferred← citeshttps://doi.org/10.1038/s41598-022-11743-2openalex-snapshot
Phylogenomics and species delimitation of the economically important Black Basses (Micropterus)
inferred← citeshttps://doi.org/10.1038/s42003-018-0176-6openalex-snapshot
Incomplete lineage sorting rather than hybridization explains the inconsistent phylogeny of the wisent
inferred← citeshttps://doi.org/10.1038/srep41005openalex-snapshot
Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae)
inferred← citeshttps://doi.org/10.1071/is16042openalex-snapshot
Placing the forgotten: on the positions of Euenchytraeus and Chamaedrilus in an updated enchytraeid phylogeny (Clitellata : Enchytraeidae)
inferred← citeshttps://doi.org/10.1071/pc14932openalex-snapshot
Placing the Fijian Honeyeaters within the meliphagid radiation: implications for origins and conservation
inferred← citeshttps://doi.org/10.1073/pnas.1323926111openalex-snapshot
Phylotranscriptomic analysis of the origin and early diversification of land plants
inferred← citeshttps://doi.org/10.1073/pnas.1514280112openalex-snapshot
Water from the rock: Ancient aquatic angiosperms flow from the fossil record
inferred← citeshttps://doi.org/10.1073/pnas.1922873117openalex-snapshot
Water lily ( Nymphaea thermarum ) genome reveals variable genomic signatures of ancient vascular cambium losses
inferred← citeshttps://doi.org/10.1089/cmb.2022.0212openalex-snapshot
Quartet Based Gene Tree Imputation Using Deep Learning Improves Phylogenomic Analyses Despite Missing Data
inferred← citeshttps://doi.org/10.1093/9780197831533.001.0001openalex-snapshot
Adaptationist Evo-Devo
inferred← citeshttps://doi.org/10.1093/9780197831533.002.0004openalex-snapshot
Dedication
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0001openalex-snapshot
Introduction
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0002openalex-snapshot
Standard adaptation
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0003openalex-snapshot
Developmental potential and adaptation
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0004openalex-snapshot
Evolution and developmental systems
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0005openalex-snapshot
Understanding phenotypic plasticity and its role in evolution
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0006openalex-snapshot
Building adaptationist evo-devo explanations of organismal form
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0007openalex-snapshot
Conclusion
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0008openalex-snapshot
Glossary
inferred← citeshttps://doi.org/10.1093/aob/mcae084openalex-snapshot
Organellar phylogenomics at the epidendroid orchid base, with a focus on the mycoheterotrophic Wullschlaegelia
inferred← citeshttps://doi.org/10.1093/aob/mcaf002openalex-snapshot
Ancient reticulation, incomplete lineage sorting and the evolution of the pyrenoid at the dawn of hornwort diversification
inferred← citeshttps://doi.org/10.1093/aob/mcw244openalex-snapshot
The morphophysiological dormancy inAmborella trichopodaseeds is a pleisiomorphic trait in angiosperms
inferred← citeshttps://doi.org/10.1093/aob/mcw278openalex-snapshot
Dioecy inAmborella trichopoda:evidence for genetically based sex determination and its consequences for inferences of the breeding system in early angiosperms
inferred← citeshttps://doi.org/10.1093/bioinformatics/btab428openalex-snapshot
wQFM: highly accurate genome-scale species tree estimation from weighted quartets
inferred← citeshttps://doi.org/10.1093/bioinformatics/btad332openalex-snapshot
Quartet Fiduccia–Mattheyses revisited for larger phylogenetic studies
inferred← citeshttps://doi.org/10.1093/bioinformatics/btv234openalex-snapshot
ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes
inferred← citeshttps://doi.org/10.1093/botlinnean/boad045openalex-snapshot
Phylogeny and infrageneric classification of Clerodendrum (Lamiaceae)
inferred← citeshttps://doi.org/10.1093/botlinnean/boz033openalex-snapshot
The phylogenomics of diversification on an island: applying anchored hybrid enrichment to New Zealand Leptospermum scoparium (Myrtaceae)
inferred← citeshttps://doi.org/10.1093/cz/zoy072openalex-snapshot
Reconstructing the phylogeny of new world monkeys (platyrrhini): evidence from multiple non-coding loci
inferred← citeshttps://doi.org/10.1093/gbe/evab101openalex-snapshot
Large Phylogenomic Data sets Reveal Deep Relationships and Trait Evolution in Chlorophyte Green Algae
inferred← citeshttps://doi.org/10.1093/gbe/evw179openalex-snapshot
A Genome-Scale Investigation of How Sequence, Function, and Tree-Based Gene Properties Influence Phylogenetic Inference
inferred← citeshttps://doi.org/10.1093/gbe/evx233openalex-snapshot
Expanded Taxonomic Sampling Coupled with Gene Genealogy Interrogation Provides Unambiguous Resolution for the Evolutionary Root of Angiosperms
inferred← citeshttps://doi.org/10.1093/gbe/evz167openalex-snapshot
A Novel Test for Absolute Fit of Evolutionary Models Provides a Means to Correctly Identify the Substitution Model and the Model Tree
inferred← citeshttps://doi.org/10.1093/molbev/msaa251openalex-snapshot
Interrogating Genomic-Scale Data to Resolve Recalcitrant Nodes in the Spider Tree of Life
inferred← citeshttps://doi.org/10.1093/molbev/msu331openalex-snapshot
Coalescent Methods Are Robust to the Simultaneous Effects of Long Branches and Incomplete Lineage Sorting
inferred← citeshttps://doi.org/10.1093/molbev/msv266openalex-snapshot
The Impact of Missing Data on Species Tree Estimation
inferred← citeshttps://doi.org/10.1093/molbev/msw079openalex-snapshot
Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies
inferred← citeshttps://doi.org/10.1093/molbev/msx261openalex-snapshot
Fragmentary Gene Sequences Negatively Impact Gene Tree and Species Tree Reconstruction
inferred← citeshttps://doi.org/10.1093/molbev/msx302openalex-snapshot
Evaluating Fast Maximum Likelihood-Based Phylogenetic Programs Using Empirical Phylogenomic Data Sets
inferred← citeshttps://doi.org/10.1093/sysbio/syaa083openalex-snapshot
The Perfect Storm: Gene Tree Estimation Error, Incomplete Lineage Sorting, and Ancient Gene Flow Explain the Most Recalcitrant Ancient Angiosperm Clade, Malpighiales
inferred← citeshttps://doi.org/10.1093/sysbio/syab013openalex-snapshot
Interrogating Phylogenetic Discordance Resolves Deep Splits in the Rapid Radiation of Old World Fruit Bats (Chiroptera: Pteropodidae)
inferred← citeshttps://doi.org/10.1093/sysbio/syab094openalex-snapshot
Whole-Genome Phylogenetic Reconstruction as a Powerful Tool to Reveal Homoplasy and Ancient Rapid Radiation in Waterflea Evolution
inferred← citeshttps://doi.org/10.1093/sysbio/syac032openalex-snapshot
Target Enrichment and Extensive Population Sampling Help Untangle the Recent, Rapid Radiation of Oenothera Sect. Calylophus
inferred← citeshttps://doi.org/10.1093/sysbio/syac040openalex-snapshot
Species Tree Estimation and the Impact of Gene Loss Following Whole-Genome Duplication
inferred← citeshttps://doi.org/10.1093/sysbio/syv028openalex-snapshot
The Root of Flowering Plants and Total Evidence
inferred← citeshttps://doi.org/10.1093/sysbio/syv035openalex-snapshot
Species-Level Phylogeny and Polyploid Relationships inHordeum(Poaceae) Inferred by Next-Generation Sequencing andIn SilicoCloning of Multiple Nuclear Loci
inferred← citeshttps://doi.org/10.1093/sysbio/syv058openalex-snapshot
How Should Genes and Taxa be Sampled for Phylogenomic Analyses with Missing Data? An Empirical Study in Iguanian Lizards
inferred← citeshttps://doi.org/10.1093/sysbio/syw042openalex-snapshot
Estimating Bayesian Phylogenetic Information Content
inferred← citeshttps://doi.org/10.1093/sysbio/syw057openalex-snapshot
The Identification of the Closest Living Relative(s) of Tetrapods: Phylogenomic Lessons for Resolving Short Ancient Internodes
inferred← citeshttps://doi.org/10.1093/sysbio/syw082openalex-snapshot
Incomplete Lineage Sorting in Mammalian Phylogenomics
inferred← citeshttps://doi.org/10.1093/sysbio/syw086openalex-snapshot
Evaluating the Impact of Genomic Data and Priors on Bayesian Estimates of the Angiosperm Evolutionary Timescale
inferred← citeshttps://doi.org/10.1093/sysbio/syy043openalex-snapshot
Analyzing Contentious Relationships and Outlier Genes in Phylogenomics
inferred← citeshttps://doi.org/10.1093/sysbio/syz007openalex-snapshot
Assessing Combinability of Phylogenomic Data Using Bayes Factors
inferred← citeshttps://doi.org/10.1093/sysbio/syz058openalex-snapshot
Quartet-Based Computations of Internode Certainty Provide Robust Measures of Phylogenetic Incongruence
inferred← citeshttps://doi.org/10.1093/sysbio/syz078openalex-snapshot
Phylogenetic Conflicts, Combinability, and Deep Phylogenomics in Plants
inferred← citeshttps://doi.org/10.1101/187997openalex-snapshot
Multispecies coalescent analysis unravels the non-monophyly and controversial relationships of Hexapoda
inferred← citeshttps://doi.org/10.1101/2020.01.28.923458openalex-snapshot
Protein evolution is structure dependent and non-homogeneous across the tree of life
inferred← citeshttps://doi.org/10.1101/2020.03.27.012237openalex-snapshot
When species trees disagree: an approach consistent with the coalescent that quantifies phylogenomic support for contentious relationships
inferred← citeshttps://doi.org/10.1101/2022.03.08.483551openalex-snapshot
Iterative deletion of gene trees detects extreme biases in distance-based phylogenomic coalescent analyses
inferred← citeshttps://doi.org/10.1101/371930openalex-snapshot
Phylogenetic conflicts, combinability, and deep phylogenomics in plants
inferred← citeshttps://doi.org/10.1101/531855openalex-snapshot
Long-distance dispersal shaped the diversity of tribe Dorstenieae (Moraceae)
inferred← citeshttps://doi.org/10.1111/1749-4877.12676openalex-snapshot
Comparative transcriptome analysis reveals molecular adaptations underlying distinct immunity and inverted resting posture in bats
inferred← citeshttps://doi.org/10.1111/boj.12399openalex-snapshot
An introduction to plant phylogenomics with a focus on palms
inferred← citeshttps://doi.org/10.1111/cla.12170openalex-snapshot
Resolution of a concatenation/coalescence kerfuffle: partitioned coalescence support and a robust family‐level tree for Mammalia
inferred← citeshttps://doi.org/10.1111/cla.12177openalex-snapshot
Mutually exclusive phylogenomic inferences at the root of the angiosperms: Amborella is supported as sister and Observed Variability is biased
inferred← citeshttps://doi.org/10.1111/cla.12191openalex-snapshot
Optimal data partitioning, multispecies coalescent and Bayesian concordance analyses resolve early divergences of the grape family (Vitaceae)
inferred← citeshttps://doi.org/10.1111/cla.12540openalex-snapshot
Quantification of congruence among gene trees with polytomies using overall success of resolution for phylogenomic coalescent analyses
inferred← citeshttps://doi.org/10.1111/evo.12644openalex-snapshot
Phylogenetic uncertainty revisited: Implications for ecological analyses
inferred← citeshttps://doi.org/10.1111/evo.13133openalex-snapshot
Genomic data reveals potential for hybridization, introgression, and incomplete lineage sorting to confound phylogenetic relationships in an adaptive radiation of narrow‐mouth frogs
inferred← citeshttps://doi.org/10.1111/jbi.15165openalex-snapshot
Twin Cradles of Diversity: Parallel In‐Situ Radiations in India and Africa Drive the Evolution of Hemidactylus Geckos
inferred← citeshttps://doi.org/10.1111/jeb.13355openalex-snapshot
Multispecies coalescent analysis confirms standing phylogenetic instability in Hexapoda
inferred← citeshttps://doi.org/10.1111/jeu.12253openalex-snapshot
Uncovering Cryptic Diversity in Two Amoebozoan Species Using Complete Mitochondrial Genome Sequences
inferred← citeshttps://doi.org/10.1111/jipb.13224openalex-snapshot
Origin and evolution of green plants in the light of key evolutionary events
inferred← citeshttps://doi.org/10.1111/jipb.13455openalex-snapshot
Genome‐scale angiosperm phylogenies based on nuclear, plastome, and mitochondrial datasets
inferred← citeshttps://doi.org/10.1111/jse.12160openalex-snapshot
Coalescent methods for estimating species trees from phylogenomic data
inferred← citeshttps://doi.org/10.1111/jse.12211openalex-snapshot
Phylogeny of the Rosidae: A dense taxon sampling analysis
inferred← citeshttps://doi.org/10.1111/jse.12708openalex-snapshot
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants
inferred← citeshttps://doi.org/10.1111/mec.13707openalex-snapshot
Genomic data reveal ancient microendemism in forest scorpions across the California Floristic Province
inferred← citeshttps://doi.org/10.1111/mec.14504openalex-snapshot
Integrating genomic and phenotypic data to evaluate alternative phylogenetic and species delimitation hypotheses in a recent evolutionary radiation of grasshoppers
inferred← citeshttps://doi.org/10.1111/mec.17764openalex-snapshot
Reconciling Gene Tree Discordance and Biogeography in European Crows
inferred← citeshttps://doi.org/10.1111/nph.15708openalex-snapshot
How deep is the conflict between molecular and fossil evidence on the age of angiosperms?
inferred← citeshttps://doi.org/10.1111/nph.19201openalex-snapshot
A time tree for the evolution of insect, vertebrate, wind, and water pollination in the angiosperms
inferred← citeshttps://doi.org/10.1111/nyas.12747openalex-snapshot
Estimating phylogenetic trees from genome‐scale data
inferred← citeshttps://doi.org/10.1111/syen.12427openalex-snapshot
Conflicting signal in transcriptomic markers leads to a poorly resolved backbone phylogeny of chalcidoid wasps
inferred← citeshttps://doi.org/10.1111/syen.12684openalex-snapshot
Inconsistent performance of multi‐type genomic data in phylogenomics of neuropteridan insects, with solutions toward conflicting results
inferred← citeshttps://doi.org/10.1111/syen.70017openalex-snapshot
Phylogenomics‐based click‐beetle classification tackles multiple origins of phenotypic modifications
inferred← citeshttps://doi.org/10.1111/zsc.12210openalex-snapshot
Phylogenomic subsampling: a brief review
inferred← citeshttps://doi.org/10.1111/zsc.12420openalex-snapshot
Multilocus phylogeny and systematics of Iberian endemic Squalius (Actinopterygii, Leuciscidae)
inferred← citeshttps://doi.org/10.1139/gen-2014-0138openalex-snapshot
Identification of nuclear low-copy genes and their phylogenetic utility in rosids
inferred← citeshttps://doi.org/10.1145/3388440.3412473openalex-snapshot
Protein evolution is structure dependent and non-homogeneous across the tree of life
inferred← citeshttps://doi.org/10.1186/s12862-015-0399-9openalex-snapshot
RNA-Seq based phylogeny recapitulates previous phylogeny of the genus Flaveria (Asteraceae) with some modifications
inferred← citeshttps://doi.org/10.1186/s12862-015-0416-zopenalex-snapshot
A genome-scale mining strategy for recovering novel rapidly-evolving nuclear single-copy genes for addressing shallow-scale phylogenetics in Hydrangea
inferred← citeshttps://doi.org/10.1186/s12862-015-0423-0openalex-snapshot
Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants
inferred← citeshttps://doi.org/10.1186/s12862-019-1534-9openalex-snapshot
The effect of alignment uncertainty, substitution models and priors in building and dating the mammal tree of life
inferred← citeshttps://doi.org/10.1186/s12862-023-02185-zopenalex-snapshot
Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.1186/s12864-018-4991-4openalex-snapshot
The complete mitochondrial genome of the early flowering plant Nymphaea colorata is highly repetitive with low recombination
inferred← citeshttps://doi.org/10.1186/s12864-022-09049-8openalex-snapshot
Characterization of the Dicranostigma leptopodum chloroplast genome and comparative analysis within subfamily Papaveroideae
inferred← citeshttps://doi.org/10.1186/s12915-025-02135-9openalex-snapshot
Phylogenomics of angiosperms based on mitochondrial genes: insights into deep node relationships
inferred← citeshttps://doi.org/10.1186/s13104-019-4577-5openalex-snapshot
Treehouse: a user-friendly application to obtain subtrees from large phylogenies
inferred← citeshttps://doi.org/10.12705/646.1openalex-snapshot
Ancestral traits and specializations in the flowers of the basal grade of living angiosperms
inferred← citeshttps://doi.org/10.1371/currents.tol.34260cc27551a527b124ec5f6334b6beopenalex-snapshot
Concatenation and Species Tree Methods Exhibit Statistically Indistinguishable Accuracy under a Range of Simulated conditions
inferred← citeshttps://doi.org/10.1371/journal.pbio.3001007openalex-snapshot
ClipKIT: A multiple sequence alignment trimming software for accurate phylogenomic inference
inferred← citeshttps://doi.org/10.1371/journal.pone.0137532openalex-snapshot
The Complete Moss Mitochondrial Genome in the Angiosperm Amborella Is a Chimera Derived from Two Moss Whole-Genome Transfers
inferred← citeshttps://doi.org/10.1371/journal.pone.0182238openalex-snapshot
Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction
inferred← citeshttps://doi.org/10.1534/g3.116.034744openalex-snapshot
Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale Data
inferred← citeshttps://doi.org/10.1600/036364418x697021openalex-snapshot
Multilocus Phylogenetics of New World Milkweed Vines (Apocynaceae, Asclepiadoideae, Gonolobinae)
inferred← citeshttps://doi.org/10.1600/036364420x15862837791221openalex-snapshot
Phylogenomics Resolves the Relationships within Antennaria (Asteraceae, Gnaphalieae) and Yields New Insights into its Morphological Character Evolution and Biogeography
inferred← citeshttps://doi.org/10.17660/actahortic.2024.1414.8openalex-snapshot
Phylogenomics of Orchidaceae: concatenated and coalescent analyses of the plastomes provide different insights into orchid phylogeny
inferred← citeshttps://doi.org/10.21203/rs.3.rs-11050839/v1openalex-snapshot
The structure of the Cardiophorinae-Dendrometrinae clade (Coleoptera: Elateridae) is the weakest point of the current click-beetle phylogenetics and classification
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1410884/v1openalex-snapshot
Early diversification and karyotype evolution of flowering plants
inferred← citeshttps://doi.org/10.32469/10355/64234openalex-snapshot
C4 photosynthetic evolution : sub-types, diversity, and function within the grass tribe Paniceae
inferred← citeshttps://doi.org/10.3389/fevo.2024.1243221openalex-snapshot
Incomplete lineage sorting and long-branch attraction confound phylogenomic inference of Pancrustacea
inferred← citeshttps://doi.org/10.3389/fpls.2018.01941openalex-snapshot
Phylogenomics of the Major Tropical Plant Family Annonaceae Using Targeted Enrichment of Nuclear Genes
inferred← citeshttps://doi.org/10.3389/fpls.2025.1696546openalex-snapshot
Phylogenomic study of Orostachys using Angiosperms353: polyphyly of subsections with taxonomic consequences
inferred← citeshttps://doi.org/10.3390/d16070426openalex-snapshot
Relationships Among the Bryophytes and Vascular Plants: A Case Study in Deep-Time Reconstruction
inferred← citeshttps://doi.org/10.3390/genes9030123openalex-snapshot
Delimiting Coalescence Genes (C-Genes) in Phylogenomic Data Sets
inferred← citeshttps://doi.org/10.3390/plants11010052openalex-snapshot
Reassessment of Annamocarya sinesis (Carya sinensis) Taxonomy through Concatenation and Coalescence Phylogenetic Analysis
inferred← citeshttps://doi.org/10.3390/plants12173083openalex-snapshot
African Mountain Thistles: Three New Genera in the Carduus-Cirsium Group
inferred← citeshttps://doi.org/10.3417/2018074openalex-snapshot
Evolution of Angiosperm Pollen. 6. The Celastrales, Oxalidales, and Malpighiales (Com) Clade and Zygophyllales
inferred← citeshttps://doi.org/10.3732/ajb.1500298openalex-snapshot
Resolving basal lamiid phylogeny and the circumscription of Icacinaceae with a plastome‐scale data set
inferred← citeshttps://doi.org/10.3732/ajb.1600227openalex-snapshot
Anchored phylogenomics improves the resolution of evolutionary relationships in the rapid radiation of Protea L.
inferred← citeshttps://doi.org/10.4137/ebo.s22448openalex-snapshot
Phylotranscriptomic Analysis Based on Coalescence was Less Influenced by the Evolving Rates and the Number of Genes: A Case Study in Ericales
inferred← citeshttps://doi.org/10.4995/thesis/10251/176003openalex-snapshot
A genomic approach to the evolution, diversification and domestication of the genus Citrus
inferred← citeshttps://doi.org/10.6084/m9.figshare.24797896openalex-snapshot
Additional file 1 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.24798087openalex-snapshot
Additional file 2 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652528openalex-snapshot
Additional file 3 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652531openalex-snapshot
Additional file 4 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652534openalex-snapshot
Additional file 5 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652537openalex-snapshot
Additional file 6 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652540openalex-snapshot
Additional file 7 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652543openalex-snapshot
Additional file 8 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652546openalex-snapshot
Additional file 9 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652549openalex-snapshot
Additional file 10 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652552openalex-snapshot
Additional file 11 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652555openalex-snapshot
Additional file 12 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652558openalex-snapshot
Additional file 13 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652561openalex-snapshot
Additional file 14 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652564openalex-snapshot
Additional file 15 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652567openalex-snapshot
Additional file 16 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652570openalex-snapshot
Additional file 17 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652573openalex-snapshot
Additional file 18 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652576openalex-snapshot
Additional file 19 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652579openalex-snapshot
Additional file 20 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652582openalex-snapshot
Additional file 21 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652585openalex-snapshot
Additional file 22 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652588openalex-snapshot
Additional file 23 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.6084/m9.figshare.26652591openalex-snapshot
Additional file 24 of Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
inferred← citeshttps://doi.org/10.64898/2026.01.16.699981openalex-snapshot
Gene tree conflict between genomic and functional partitions impacts phylogenetic inference in Zygophylloideae
inferred← citeshttps://doi.org/10.70675/0dd95244z796bz45edz998cz93834a178085openalex-snapshot
Histoire évolutive des remaniements chromosomiques en liaison avec la mobilisation d'éléments transposables chez les téléostéens antarctiques Nototheniidae : la radiation adaptative du groupe " Trematomus "
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