On the public citation graph
Phinch: An interactive, exploratory data visualization framework for –Omic datasets
0 signed · 46 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1016/j.tree.2011.11.010openalex-snapshot
Sequencing our way towards understanding global eukaryotic biodiversity
inferredcites →https://doi.org/10.1038/nmeth.f.303openalex-snapshot
QIIME allows analysis of high-throughput community sequencing data
inferredcites →https://doi.org/10.1073/pnas.0605127103openalex-snapshot
Microbial diversity in the deep sea and the underexplored “rare biosphere”
inferredcites →https://doi.org/10.1109/mcg.2006.44openalex-snapshot
NIH-NSF visualization research challenges report summary
inferredcites →https://doi.org/10.1111/j.1365-294x.2009.04473.xopenalex-snapshot
Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises
inferredcites →https://doi.org/10.1145/1743546.1743567openalex-snapshot
A tour through the visualization zoo
inferredcites →https://doi.org/10.1145/2133416.2146416openalex-snapshot
Interactive Dynamics for Visual Analysis
inferredcites →https://doi.org/10.1186/2047-217x-1-7openalex-snapshot
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
inferredcites →https://doi.org/10.3389/fgene.2011.00047openalex-snapshot
A Grand Challenge in Evolutionary and Population Genetics: New Paradigms for Exploring the Past and Charting the Future in the Post-Genomic era
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/s00484-017-1399-9openalex-snapshot
Short communication: emerging technologies for biometeorology
inferred← citeshttps://doi.org/10.1007/s44173-022-00005-zopenalex-snapshot
PCR based fingerprinting techniques to transpire the microbial populations diversity of biofilm based nitrifying packed bed bioreactor in the bioremediation of aquaculture wastewater
inferred← citeshttps://doi.org/10.1016/j.bej.2019.03.004openalex-snapshot
pH shaped kinetic characteristics and microbial community of food waste hydrolysis and acidification
inferred← citeshttps://doi.org/10.1016/j.csbj.2020.01.005openalex-snapshot
Computational methods for 16S metabarcoding studies using Nanopore sequencing data
inferred← citeshttps://doi.org/10.1016/j.foodres.2025.116903openalex-snapshot
Assessment of source and storage conditions on bacterial composition of mineral packaged water using amplicon sequencing
inferred← citeshttps://doi.org/10.1038/s41598-019-43517-8openalex-snapshot
Chemosynthetic ectosymbionts associated with a shallow-water marine nematode
inferred← citeshttps://doi.org/10.1038/s41598-021-86399-5openalex-snapshot
The endophytic microbiota of Citrus limon is transmitted from seed to shoot highlighting differences of bacterial and fungal community structures
inferred← citeshttps://doi.org/10.1038/srep22541openalex-snapshot
A distinct and active bacterial community in cold oxygenated fluids circulating beneath the western flank of the Mid-Atlantic ridge
inferred← citeshttps://doi.org/10.1093/bioinformatics/btw507openalex-snapshot
MetaCoMET: a web platform for discovery and visualization of the core microbiome
inferred← citeshttps://doi.org/10.1093/gigascience/giaa102openalex-snapshot
A single-cell RNA-sequencing training and analysis suite using the Galaxy framework
inferred← citeshttps://doi.org/10.1093/gigascience/giab001openalex-snapshot
metaXplor: an interactive viral and microbial metagenomic data manager
inferred← citeshttps://doi.org/10.1093/gigascience/giaf017openalex-snapshot
PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
inferred← citeshttps://doi.org/10.1093/gigascience/giy166openalex-snapshot
Galaxy mothur Toolset (GmT): a user-friendly application for 16S rRNA gene sequencing analysis using mothur
inferred← citeshttps://doi.org/10.1093/nar/gkx1027openalex-snapshot
MicrobiomeDB: a systems biology platform for integrating, mining and analyzing microbiome experiments
inferred← citeshttps://doi.org/10.1101/2025.04.13.648596openalex-snapshot
JarrVis: Visualising Taxa-function relationships from meta-omic data
inferred← citeshttps://doi.org/10.1101/861260openalex-snapshot
Acetobacteraceae in the honey bee gut comprise two distant clades with diverging metabolism and ecological niches
inferred← citeshttps://doi.org/10.1111/2041-210x.12574openalex-snapshot
The ecologist's field guide to sequence‐based identification of biodiversity
inferred← citeshttps://doi.org/10.1111/2041-210x.13060openalex-snapshot
Functional exploration of natural networks and ecological communities
inferred← citeshttps://doi.org/10.1111/mec.14478openalex-snapshot
Scaling up: A guide to high‐throughput genomic approaches for biodiversity analysis
inferred← citeshttps://doi.org/10.1128/aem.01760-23openalex-snapshot
Connecting thiamine availability to the microbial community composition in Chinook salmon spawning habitats of the Sacramento River basin
inferred← citeshttps://doi.org/10.1186/s40168-015-0108-3openalex-snapshot
Microbiota of the indoor environment: a meta-analysis
inferred← citeshttps://doi.org/10.12688/f1000research.16680.1openalex-snapshot
ranacapa: An R package and Shiny web app to explore environmental DNA data with exploratory statistics and interactive visualizations
inferred← citeshttps://doi.org/10.12688/f1000research.9618.1openalex-snapshot
biojs-io-biom, a BioJS component for handling data in Biological Observation Matrix (BIOM) format
inferred← citeshttps://doi.org/10.12688/f1000research.9618.2openalex-snapshot
biojs-io-biom, a BioJS component for handling data in Biological Observation Matrix (BIOM) format
inferred← citeshttps://doi.org/10.1371/journal.pbio.2002231openalex-snapshot
Let’s rise up to unite taxonomy and technology
inferred← citeshttps://doi.org/10.17660/actahortic.2020.1281.44openalex-snapshot
How soil microbial biodiversity is modified by soil chemical parameters in differently managed olive orchards
inferred← citeshttps://doi.org/10.21775/cimb.024.037openalex-snapshot
Methods for The Metagenomic Data Visualization and Analysis
inferred← citeshttps://doi.org/10.3389/feduc.2021.711403openalex-snapshot
Integrating Bioinformatics Tools Into Inquiry-Based Molecular Biology Laboratory Education Modules
inferred← citeshttps://doi.org/10.3389/fmicb.2017.01997openalex-snapshot
Amplicon-Based Sequencing of Soil Fungi from Wood Preservative Test Sites
inferred← citeshttps://doi.org/10.3389/fmicb.2018.02246openalex-snapshot
A Nematode of the Mid-Atlantic Ridge Hydrothermal Vents Harbors a Possible Symbiotic Relationship
inferred← citeshttps://doi.org/10.3389/fmicb.2022.961736openalex-snapshot
Hormetic effect of 17α-ethynylestradiol on activated sludge microbial community response
inferred← citeshttps://doi.org/10.3390/microorganisms12030510openalex-snapshot
Exploring Cereal Metagenomics: Unravelling Microbial Communities for Improved Food Security
inferred← citeshttps://doi.org/10.3390/nu16030373openalex-snapshot
A 14-Day Double-Blind, Randomized, Controlled Crossover Intervention Study with Anti-Bacterial Benzyl Isothiocyanate from Nasturtium (Tropaeolum majus) on Human Gut Microbiome and Host Defense
inferred← citeshttps://doi.org/10.4236/aim.2019.91008openalex-snapshot
Microbiomes of Top and Sub-Layers of Semi-Arid Soils in North-Eastern Nigeria Are Rich in Firmicutes and Proteobacteria with Surprisingly High Diversity of Rare Species
inferred← citeshttps://doi.org/10.47749/t/unicamp.2021.1166993openalex-snapshot
Study of microbial diversity, quality and microbiological safety of mineral waters using predictive modeling and amplicon sequencing
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.