On the public citation graph

A user’s guide to the online resources for data exploration, visualization, and discovery for the Pan-Cancer Analysis of Whole Genomes project (PCAWG)

https://doi.org/10.1101/163907
0 signed · 22 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.cell.2010.11.055openalex-snapshot
Massive Genomic Rearrangement Acquired in a Single Catastrophic Event during Cancer Development
inferredcites →https://doi.org/10.1016/j.cell.2013.02.023openalex-snapshot
Criteria for Inference of Chromothripsis in Cancer Genomes
inferredcites →https://doi.org/10.1038/nmeth.3174openalex-snapshot
bam.iobio: a web-based, real-time, sequence alignment file inspector
inferredcites →https://doi.org/10.1038/onc.2015.109openalex-snapshot
The oncogene ERG: a key factor in prostate cancer
inferredcites →https://doi.org/10.1038/s41587-019-0055-9openalex-snapshot
The International Cancer Genome Consortium Data Portal
inferredcites →https://doi.org/10.1089/bio.2015.0032openalex-snapshot
A Novel Approach to High-Quality Postmortem Tissue Procurement: The GTEx Project
inferredcites →https://doi.org/10.1093/bioinformatics/btx763openalex-snapshot
shinyCircos: an R/Shiny application for interactive creation of Circos plot
inferredcites →https://doi.org/10.1093/database/bar018openalex-snapshot
Data mining using the Catalogue of Somatic Mutations in Cancer BioMart
inferredcites →https://doi.org/10.1093/nar/gkv1045openalex-snapshot
Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants
inferredcites →https://doi.org/10.1093/nar/gkx1098openalex-snapshot
Ensembl 2018
inferredcites →https://doi.org/10.1101/005991openalex-snapshot
iRAP - an integrated RNA-seq Analysis Pipeline
inferredcites →https://doi.org/10.1101/161638openalex-snapshot
Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments
inferredcites →https://doi.org/10.1101/181339openalex-snapshot
Patterns of structural variation in human cancer
inferredcites →https://doi.org/10.1101/190330openalex-snapshot
The whole-genome panorama of cancer drivers
inferredcites →https://doi.org/10.1101/326470openalex-snapshot
The UCSC Xena platform for public and private cancer genomics data visualization and interpretation
inferredcites →https://doi.org/10.1101/333617openalex-snapshot
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing
inferredcites →https://doi.org/10.1126/science.aaa0355openalex-snapshot
The human transcriptome across tissues and individuals
inferredcites →https://doi.org/10.1186/s13073-018-0546-1openalex-snapshot
PanDrugs: a novel method to prioritize anticancer drug treatments according to individual genomic data
inferredcites →https://doi.org/10.4172/1948-5956.1000119openalex-snapshot
TMPRSS2-ERG Fusion Gene Expression in Prostate Tumor Cells and Its Clinical and Biological Significance in Prostate Cancer Progression

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1101/2021.09.27.462082openalex-snapshot
Generation of iPSC lines with high cytogenetic stability from peripheral blood mononuclear cells (PBMCs)
inferred← citeshttps://doi.org/10.1101/gr.255026.119openalex-snapshot
Comprehensive analysis of indels in whole-genome microsatellite regions and microsatellite instability across 21 cancer types
inferred← citeshttps://doi.org/10.1186/s13073-018-0546-1openalex-snapshot
PanDrugs: a novel method to prioritize anticancer drug treatments according to individual genomic data
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