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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/s00439-013-1325-0openalex-snapshot
MuPIT interactive: webserver for mapping variant positions to annotated, interactive 3D structures
inferredcites →https://doi.org/10.1016/j.cell.2018.03.022openalex-snapshot
Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer
inferredcites →https://doi.org/10.1016/j.cell.2018.03.033openalex-snapshot
Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics
inferredcites →https://doi.org/10.1016/j.cell.2018.03.034openalex-snapshot
Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation
inferredcites →https://doi.org/10.1016/j.cell.2018.03.035openalex-snapshot
Oncogenic Signaling Pathways in The Cancer Genome Atlas
inferredcites →https://doi.org/10.1016/j.celrep.2018.03.050openalex-snapshot
Driver Fusions and Their Implications in the Development and Treatment of Human Cancers
inferredcites →https://doi.org/10.1016/j.tig.2007.12.007openalex-snapshot
The impact of next-generation sequencing technology on genetics
inferredcites →https://doi.org/10.1038/nature08987openalex-snapshot
International network of cancer genome projects
inferredcites →https://doi.org/10.1038/nature11003openalex-snapshot
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity
inferredcites →https://doi.org/10.1038/nature13385openalex-snapshot
Comprehensive molecular profiling of lung adenocarcinoma
inferredcites →https://doi.org/10.1038/nature23306openalex-snapshot
Integrative clinical genomics of metastatic cancer
inferredcites →https://doi.org/10.1038/nature25795openalex-snapshot
Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours
inferredcites →https://doi.org/10.1038/nbt.3772openalex-snapshot
Toil enables reproducible, open source, big biomedical data analyses
inferredcites →https://doi.org/10.1038/nm.2323openalex-snapshot
Cancer genomics: from discovery science to personalized medicine
inferredcites →https://doi.org/10.1038/nrg.2017.113openalex-snapshot
Cloud computing for genomic data analysis and collaboration
inferredcites →https://doi.org/10.1038/nrg.2017.96openalex-snapshot
Cancer transcriptome profiling at the juncture of clinical translation
inferredcites →https://doi.org/10.1038/s41588-018-0073-4openalex-snapshot
DNA methylation loss in late-replicating domains is linked to mitotic cell division
inferredcites →https://doi.org/10.1056/nejmp1607591openalex-snapshot
Toward a Shared Vision for Cancer Genomic Data
inferredcites →https://doi.org/10.1056/nejmra0801289openalex-snapshot
Gene-Expression Signatures in Breast Cancer
inferredcites →https://doi.org/10.1093/bib/bbs017openalex-snapshot
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
inferredcites →https://doi.org/10.1093/bioinformatics/btt100openalex-snapshot
BioJS: an open source JavaScript framework for biological data visualization
inferredcites →https://doi.org/10.1093/database/bar026openalex-snapshot
International Cancer Genome Consortium Data Portal--a one-stop shop for cancer genomics data
inferredcites →https://doi.org/10.1093/hmg/ddv235openalex-snapshot
Application of single-cell genomics in cancer: promise and challenges
inferredcites →https://doi.org/10.1101/gad.2017311openalex-snapshot
Making sense of cancer genomic data
inferredcites →https://doi.org/10.1126/science.aav1898openalex-snapshot
The chromatin accessibility landscape of primary human cancers
inferredcites →https://doi.org/10.1158/0008-5472.can-05-2749openalex-snapshot
Somatic Mutations Lead to an Oncogenic Deletion of Met in Lung Cancer
inferredcites →https://doi.org/10.1158/0008-5472.can-17-0580openalex-snapshot
TumorMap: Exploring the Molecular Similarities of Cancer Samples in an Interactive Portal
inferredcites →https://doi.org/10.1158/2159-8290.cd-12-0095openalex-snapshot
The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data
inferredcites →https://doi.org/10.1182/blood-2017-03-735654openalex-snapshot
The NCI Genomic Data Commons as an engine for precision medicine
inferredcites →https://doi.org/10.1186/gm413openalex-snapshot
Visualizing multidimensional cancer genomics data
inferredcites →https://doi.org/10.1186/s13059-015-0648-7openalex-snapshot
Cis-regulatory somatic mutations and gene-expression alteration in B-cell lymphomas
inferredcites →https://doi.org/10.1200/jco.2017.35.15_suppl.tps10578openalex-snapshot
Comparative genomic analysis for pediatric cancer patients evaluated in a California Initiative to Advance Precision Medicine Demonstration Project.
inferredcites →https://doi.org/10.1371/journal.pbio.1002195openalex-snapshot
Big Data: Astronomical or Genomical?
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Integrative Identification of Driver Genes for Enhanced Personalized Cancer Subtype Classification
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Increased LGALS3 expression independently predicts shorter overall survival in patients with the proneural subtype of glioblastoma
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Water as a reactant in the differential expression of proteins in cancer
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Construction of integrated microRNA and mRNA immune cell signatures to predict survival of patients with breast and ovarian cancer
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Data mining combined with experiments to validate CEP55 as a prognostic biomarker in colorectal cancer
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Elevated expression of ACE2 in tumor‐adjacent normal tissues of cancer patients
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Constitutive low expression of antiviral effectors sensitizes melanoma cells to a novel oncolytic virus
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inferred← citeshttps://doi.org/10.1007/978-1-0716-4901-5_31openalex-snapshot
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A Transfer-Learning Approach to Feature Extraction from Cancer Transcriptomes with Deep Autoencoders
inferred← citeshttps://doi.org/10.1007/978-3-030-32656-2_18openalex-snapshot
Oncogenic ETS Factors in Prostate Cancer
inferred← citeshttps://doi.org/10.1007/978-3-031-45170-6_88openalex-snapshot
Quantifying Intratumor Heterogeneity by Key Genes Selected Using Concrete Autoencoder
inferred← citeshttps://doi.org/10.1007/978-981-99-9436-6_1openalex-snapshot
Design of a Boosting-Based Similarity Measure for Evaluating Gene Expression Using Learning Approaches
inferred← citeshttps://doi.org/10.1007/s00109-020-02023-5openalex-snapshot
MT1 and MT2 melatonin receptors play opposite roles in brain cancer progression
inferred← citeshttps://doi.org/10.1007/s00262-020-02605-9openalex-snapshot
Systemic but not MDSC-specific IRF4 deficiency promotes an immunosuppressed tumor microenvironment in a murine pancreatic cancer model
inferred← citeshttps://doi.org/10.1007/s00330-019-06371-wopenalex-snapshot
A radiogenomics signature for predicting the clinical outcome of bladder urothelial carcinoma
inferred← citeshttps://doi.org/10.1007/s00432-021-03859-1openalex-snapshot
Overexpression of melanoma-associated antigen A2 has a clinical significance in embryonal carcinoma and is associated with tumor progression
inferred← citeshttps://doi.org/10.1007/s00432-022-04336-zopenalex-snapshot
Low expression of isocitrate dehydrogenase 1 (IDH1) R132H is associated with advanced pathological features in laryngeal squamous cell carcinoma
inferred← citeshttps://doi.org/10.1007/s10238-026-02061-2openalex-snapshot
Alternative splicing events show high prognostic values and indicate potential core genes in acute myeloid leukemia
inferred← citeshttps://doi.org/10.1007/s10456-019-09688-8openalex-snapshot
Cancer-associated fibroblast-derived WNT2 increases tumor angiogenesis in colon cancer
inferred← citeshttps://doi.org/10.1007/s10577-020-09638-xopenalex-snapshot
Genomic and epigenetic aberrations of chromosome 1p36.13 have prognostic implications in malignancies
inferred← citeshttps://doi.org/10.1007/s10620-023-08032-xopenalex-snapshot
Identification of Molecular Targets of Bile Acids Acting on Colorectal Cancer and Their Correlation with Immunity
inferred← citeshttps://doi.org/10.1007/s10911-020-09448-1openalex-snapshot
Identification of an AP1-ZFP36 Regulatory Network Associated with Breast Cancer Prognosis
inferred← citeshttps://doi.org/10.1007/s11060-019-03226-8openalex-snapshot
MPC1 deletion is associated with poor prognosis and temozolomide resistance in glioblastoma
inferred← citeshttps://doi.org/10.1007/s11427-020-1811-5openalex-snapshot
Single-cell genomic profile-based analysis of tissue differentiation in colorectal cancer
inferred← citeshttps://doi.org/10.1007/s12032-023-02024-7openalex-snapshot
Important oncogenic and immunogenic roles of SPP1 and CSF1 in hepatocellular carcinoma
inferred← citeshttps://doi.org/10.1007/s12539-022-00517-zopenalex-snapshot
Pharmacogenomic Cluster Analysis of Lung Cancer Cell Lines Provides Insights into Preclinical Model Selection in NSCLC
inferred← citeshttps://doi.org/10.1007/s12561-024-09451-8openalex-snapshot
Pan-Cancer Drug Response Prediction Using Integrative Principal Component Regression
inferred← citeshttps://doi.org/10.1007/s12672-025-01803-0openalex-snapshot
A pan-cancer analysis: predictive role of ZNF32 in cancer prognosis and immunotherapy response
inferred← citeshttps://doi.org/10.1007/s12672-025-03215-6openalex-snapshot
Mitochondrial fission genes MTFP1/MTFP2 as predictive biomarkers in prostate cancer: a mendelian randomization study
inferred← citeshttps://doi.org/10.1007/s13721-020-0225-1openalex-snapshot
Prognostic significance of the Cdk5 gene in breast cancer: an in silico study
inferred← citeshttps://doi.org/10.1016/j.bbagrm.2019.194419openalex-snapshot
The how and why of lncRNA function: An innate immune perspective
inferred← citeshttps://doi.org/10.1016/j.bbrep.2020.100867openalex-snapshot
Validation of CSN1S1 transcriptional expression, promoter methylation, and prognostic power in breast cancer using independent datasets
inferred← citeshttps://doi.org/10.1016/j.biopha.2019.108944openalex-snapshot
MiR-362-3p is downregulated by promoter methylation and independently predicts shorter OS of cervical squamous cell carcinoma
inferred← citeshttps://doi.org/10.1016/j.biopha.2019.109244openalex-snapshot
Multi-omics profiling reveals distinct microenvironment characterization of endometrial cancer
inferred← citeshttps://doi.org/10.1016/j.biopha.2019.109433openalex-snapshot
Systematic screening of protein-coding gene expression identified HMMR as a potential independent indicator of unfavorable survival in patients with papillary muscle-invasive bladder cancer
inferred← citeshttps://doi.org/10.1016/j.biopha.2019.109546openalex-snapshot
Identification of driver genes regulating immune cell infiltration in cervical cancer by multiple omics integration
inferred← citeshttps://doi.org/10.1016/j.biopha.2019.109637openalex-snapshot
Comprehensive characterization of tumor infiltrating natural killer cells and clinical significance in hepatocellular carcinoma based on gene expression profiles
inferred← citeshttps://doi.org/10.1016/j.biopha.2024.117787openalex-snapshot
The inhibition of SLC8A1 promotes Ca2+-dependent cell death in Gastric Cancer
inferred← citeshttps://doi.org/10.1016/j.bspc.2022.103922openalex-snapshot
Expression analysis, molecular characterization and prognostic evaluation on TMED4 and TMED9 gene expression in glioma
inferred← citeshttps://doi.org/10.1016/j.canlet.2019.10.010openalex-snapshot
CD44(+) tumor cells promote early angiogenesis in head and neck squamous cell carcinoma
inferred← citeshttps://doi.org/10.1016/j.ccell.2020.01.003openalex-snapshot
The Repertoire of Serous Ovarian Cancer Non-genetic Heterogeneity Revealed by Single-Cell Sequencing of Normal Fallopian Tube Epithelial Cells
inferred← citeshttps://doi.org/10.1016/j.cell.2023.11.022openalex-snapshot
Metabolic regulation of homologous recombination repair by MRE11 lactylation
inferred← citeshttps://doi.org/10.1016/j.cellsig.2021.109972openalex-snapshot
LGR5/R-Spo1/Wnt3a axis promotes stemness and aggressive phenotype in hepatoblast-like hepatocellular carcinoma cell lines
inferred← citeshttps://doi.org/10.1016/j.cellsig.2021.109996openalex-snapshot
miR-770-5p regulates EMT and invasion in TNBC cells by targeting DNMT3A
inferred← citeshttps://doi.org/10.1016/j.cellsig.2023.111018openalex-snapshot
The impact of LncRNA-SOX2-OT/let-7c-3p/SKP2 Axis on head and neck squamous cell carcinoma progression: Insights from bioinformatics analysis and experimental validation
inferred← citeshttps://doi.org/10.1016/j.celrep.2022.110800openalex-snapshot
A pan-cancer metabolic atlas of the tumor microenvironment
inferred← citeshttps://doi.org/10.1016/j.clineuro.2018.07.003openalex-snapshot
Loss of MycBP may be associated with the improved survival in 1P co-deletion of lower grade glioma patients
inferred← citeshttps://doi.org/10.1016/j.clineuro.2018.12.021openalex-snapshot
Allergy may confer better survival on patients with gliomas
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Artificial intelligence techniques for prediction of drug synergy in malignant diseases: Past, present, and future
inferred← citeshttps://doi.org/10.1016/j.ctarc.2022.100595openalex-snapshot
EARS2 significantly coexpresses with PALB2 in breast and pancreatic cancer
inferred← citeshttps://doi.org/10.1016/j.cyto.2022.155887openalex-snapshot
IL-36G promotes cancer-cell intrinsic hallmarks in human gastric cancer cells
inferred← citeshttps://doi.org/10.1016/j.ebiom.2019.01.063openalex-snapshot
Integrated epigenomic profiling reveals endogenous retrovirus reactivation in renal cell carcinoma
inferred← citeshttps://doi.org/10.1016/j.ebiom.2020.103051openalex-snapshot
Pan-cancer analysis of somatic mutations in miRNA genes
inferred← citeshttps://doi.org/10.1016/j.gendis.2020.01.015openalex-snapshot
ITGA2 promotes expression of ACLY and CCND1 in enhancing breast cancer stemness and metastasis
inferred← citeshttps://doi.org/10.1016/j.gocm.2020.10.006openalex-snapshot
BRCA1/2mutations and survival of high-grade endometrioid endometrial cancer
inferred← citeshttps://doi.org/10.1016/j.imbio.2023.152352openalex-snapshot
Identification of a novel Immune-Related prognostic model for patients with colorectal cancer based on 3 subtypes
inferred← citeshttps://doi.org/10.1016/j.isci.2024.109288openalex-snapshot
The RNA binding proteins LARP4A and LARP4B promote sarcoma and carcinoma growth and metastasis
inferred← citeshttps://doi.org/10.1016/j.jare.2021.02.002openalex-snapshot
PIK3CB is involved in metastasis through the regulation of cell adhesion to collagen I in pancreatic cancer
inferred← citeshttps://doi.org/10.1016/j.jbi.2024.104729openalex-snapshot
Advancing cancer driver gene identification through an integrative network and pathway approach
inferred← citeshttps://doi.org/10.1016/j.jgr.2022.09.006openalex-snapshot
Ginsenoside Rg3, a promising agent for NSCLC patients in the pandemic: a large-scale data mining and systemic biological analysis
inferred← citeshttps://doi.org/10.1016/j.jmva.2024.105360openalex-snapshot
Grouped feature screening for ultrahigh-dimensional classification via Gini distance correlation
inferred← citeshttps://doi.org/10.1016/j.jsbmb.2019.105559openalex-snapshot
Meta-Analysis of steroid-converting enzymes and related receptors in prostate cancer suggesting novel combined therapies
inferred← citeshttps://doi.org/10.1016/j.jss.2018.08.021openalex-snapshot
COMP Gene Coexpresses With EMT Genes and Is Associated With Poor Survival in Colon Cancer Patients
inferred← citeshttps://doi.org/10.1016/j.mce.2020.110701openalex-snapshot
Interplay of ERα binding and DNA methylation in the intron-2 determines the expression and estrogen regulation of cystatin A in breast cancer cells
inferred← citeshttps://doi.org/10.1016/j.molcel.2023.02.004openalex-snapshot
SLFN5-mediated chromatin dynamics sculpt higher-order DNA repair topology
inferred← citeshttps://doi.org/10.1016/j.molstruc.2022.134619openalex-snapshot
Effect of azomethine group containing compounds on gene profiles in Wnt and MAPK signal patterns in lung cancer cell line: In silico and in vitro analyses
inferred← citeshttps://doi.org/10.1016/j.phymed.2022.154491openalex-snapshot
Systems biology strategy and experimental validation to uncover the pharmacological mechanism of Xihuang Pill in treating non-small cell lung cancer
inferred← citeshttps://doi.org/10.1016/j.prp.2021.153435openalex-snapshot
MiR-25 and KLF4 relationship has early prognostic significance in the development of cervical cancer
inferred← citeshttps://doi.org/10.1016/j.surg.2019.02.024openalex-snapshot
Immune cell infiltrate-associated dysregulation of DNA repair machinery may predispose to papillary thyroid carcinogenesis
inferred← citeshttps://doi.org/10.1016/j.trecan.2018.12.001openalex-snapshot
Muscle-Specific FXR1 Isoforms in Squamous Cell Cancer
inferred← citeshttps://doi.org/10.1016/j.ygyno.2019.08.014openalex-snapshot
MTDH/AEG-1 downregulation using pristimerin-loaded nanoparticles inhibits Fanconi anemia proteins and increases sensitivity to platinum-based chemotherapy
inferred← citeshttps://doi.org/10.1016/j.ymeth.2018.12.009openalex-snapshot
Manipulating the mechanics of extracellular matrix to study effects on the nucleus and its structure
inferred← citeshttps://doi.org/10.1021/acs.jmedchem.0c02171openalex-snapshot
Imaging of Fibroblast Activation Protein in Cancer Xenografts Using Novel (4-Quinolinoyl)-glycyl-2-cyanopyrrolidine-Based Small Molecules
inferred← citeshttps://doi.org/10.1038/s10038-019-0687-0openalex-snapshot
Visualization tools for human structural variations identified by whole-genome sequencing
inferred← citeshttps://doi.org/10.1038/s41374-022-00801-yopenalex-snapshot
A convolutional neural network model for survival prediction based on prognosis-related cascaded Wx feature selection
inferred← citeshttps://doi.org/10.1038/s41388-018-0586-4openalex-snapshot
The lncRNA BORG facilitates the survival and chemoresistance of triple-negative breast cancers
inferred← citeshttps://doi.org/10.1038/s41388-019-1022-0openalex-snapshot
Genome-wide screening identifies novel genes implicated in cellular sensitivity to BRAFV600E expression
inferred← citeshttps://doi.org/10.1038/s41388-020-1196-5openalex-snapshot
The ACSL3-LPIAT1 signaling drives prostaglandin synthesis in non-small cell lung cancer
inferred← citeshttps://doi.org/10.1038/s41388-020-1361-xopenalex-snapshot
NEK10 tyrosine phosphorylates p53 and controls its transcriptional activity
inferred← citeshttps://doi.org/10.1038/s41388-021-01783-9openalex-snapshot
Targeting non-canonical activation of GLI1 by the SOX2-BRD4 transcriptional complex improves the efficacy of HEDGEHOG pathway inhibition in melanoma
inferred← citeshttps://doi.org/10.1038/s41388-021-02113-9openalex-snapshot
Histone N-terminal acetyltransferase NAA40 links one-carbon metabolism to chemoresistance
inferred← citeshttps://doi.org/10.1038/s41389-020-00245-3openalex-snapshot
Histoepigenetic analysis of the mesothelin network within pancreatic ductal adenocarcinoma cells reveals regulation of retinoic acid receptor gamma and AKT by mesothelin
inferred← citeshttps://doi.org/10.1038/s41416-020-0891-xopenalex-snapshot
CDK4/6 inhibition presents as a therapeutic option for paediatric and adult germ cell tumours and induces cell cycle arrest and apoptosis via canonical and non-canonical mechanisms
inferred← citeshttps://doi.org/10.1038/s41416-024-02642-6openalex-snapshot
RNA expression of 6 genes from metastatic mucosal gastric cancer serves as the global prognostic marker for gastric cancer with functional validation
inferred← citeshttps://doi.org/10.1038/s41418-021-00811-1openalex-snapshot
MLKL promotes cellular differentiation in myeloid leukemia by facilitating the release of G-CSF
inferred← citeshttps://doi.org/10.1038/s41419-020-2258-xopenalex-snapshot
The transcription elongation factor TCEA3 induces apoptosis in rhabdomyosarcoma
inferred← citeshttps://doi.org/10.1038/s41419-020-2309-3openalex-snapshot
Low expression of pro-apoptotic proteins Bax, Bak and Smac indicates prolonged progression-free survival in chemotherapy-treated metastatic melanoma
inferred← citeshttps://doi.org/10.1038/s41419-021-03730-8openalex-snapshot
CXCR4 intracellular protein promotes drug resistance and tumorigenic potential by inversely regulating the expression of Death Receptor 5
inferred← citeshttps://doi.org/10.1038/s41420-019-0235-xopenalex-snapshot
BORIS/CTCFL promotes a switch from a proliferative towards an invasive phenotype in melanoma cells
inferred← citeshttps://doi.org/10.1038/s41420-020-00295-xopenalex-snapshot
The prognostic value of six survival-related genes in bladder cancer
inferred← citeshttps://doi.org/10.1038/s41420-026-03058-2openalex-snapshot
Salinomycin as a death switch: how gastric cancer cells choose their demise
inferred← citeshttps://doi.org/10.1038/s41422-020-00458-6openalex-snapshot
Mutual dependency between lncRNA LETN and protein NPM1 in controlling the nucleolar structure and functions sustaining cell proliferation
inferred← citeshttps://doi.org/10.1038/s41467-019-12610-xopenalex-snapshot
ZC3H18 specifically binds and activates the BRCA1 promoter to facilitate homologous recombination in ovarian cancer
inferred← citeshttps://doi.org/10.1038/s41467-020-16000-6openalex-snapshot
MethCORR modelling of methylomes from formalin-fixed paraffin-embedded tissue enables characterization and prognostication of colorectal cancer
inferred← citeshttps://doi.org/10.1038/s41467-020-16051-9openalex-snapshot
SH3RF3 promotes breast cancer stem-like properties via JNK activation and PTX3 upregulation
inferred← citeshttps://doi.org/10.1038/s41467-020-17028-4openalex-snapshot
Phosphodiesterase-5 inhibitors use and risk for mortality and metastases among male patients with colorectal cancer
inferred← citeshttps://doi.org/10.1038/s41467-020-18452-2openalex-snapshot
DENR promotes translation reinitiation via ribosome recycling to drive expression of oncogenes including ATF4
inferred← citeshttps://doi.org/10.1038/s41467-020-20294-xopenalex-snapshot
Global computational alignment of tumor and cell line transcriptional profiles
inferred← citeshttps://doi.org/10.1038/s41467-021-24792-4openalex-snapshot
The HSP90/R2TP assembly chaperone promotes cell proliferation in the intestinal epithelium
inferred← citeshttps://doi.org/10.1038/s41556-019-0345-yopenalex-snapshot
An ARF6–Exportin-5 axis delivers pre-miRNA cargo to tumour microvesicles
inferred← citeshttps://doi.org/10.1038/s41556-021-00723-9openalex-snapshot
ASTE1 promotes shieldin-complex-mediated DNA repair by attenuating end resection
inferred← citeshttps://doi.org/10.1038/s41586-020-1969-6openalex-snapshot
Pan-cancer analysis of whole genomes
inferred← citeshttps://doi.org/10.1038/s41586-020-2071-9openalex-snapshot
Gasdermin E suppresses tumour growth by activating anti-tumour immunity
inferred← citeshttps://doi.org/10.1038/s41587-019-0259-zopenalex-snapshot
Integrated genomic profiling expands clinical options for patients with cancer
inferred← citeshttps://doi.org/10.1038/s41590-020-00860-7openalex-snapshot
Tumor hypoxia represses γδ T cell-mediated antitumor immunity against brain tumors
inferred← citeshttps://doi.org/10.1038/s41597-019-0096-4openalex-snapshot
Barriers to accessing public cancer genomic data
inferred← citeshttps://doi.org/10.1038/s41598-018-32694-7openalex-snapshot
A short isoform of ATG7 fails to lipidate LC3/GABARAP
inferred← citeshttps://doi.org/10.1038/s41598-019-48243-9openalex-snapshot
A co-expressed gene status of adenylate kinase 1/4 reveals prognostic gene signature associated with prognosis and sensitivity to EGFR targeted therapy in lung adenocarcinoma
inferred← citeshttps://doi.org/10.1038/s41598-019-56894-xopenalex-snapshot
In silico analysis of alternative splicing on drug-target gene interactions
inferred← citeshttps://doi.org/10.1038/s41598-020-59605-zopenalex-snapshot
Identification of Key Components in Colon Adenocarcinoma Using Transcriptome to Interactome Multilayer Framework
inferred← citeshttps://doi.org/10.1038/s41598-020-67846-1openalex-snapshot
Genome-wide investigation of gene-cancer associations for the prediction of novel therapeutic targets in oncology
inferred← citeshttps://doi.org/10.1038/s41598-020-68835-0openalex-snapshot
Gene expression profiling identifies the role of Zac1 in cervical cancer metastasis
inferred← citeshttps://doi.org/10.1038/s41598-020-74631-7openalex-snapshot
HIF1α is not a target of 14q deletion in clear cell renal cancer
inferred← citeshttps://doi.org/10.1038/s41598-020-74838-8openalex-snapshot
Identification of drivers of breast cancer invasion by secretome analysis: insight into CTGF signaling
inferred← citeshttps://doi.org/10.1038/s41598-020-75688-0openalex-snapshot
Analysis of open chromatin regions in bladder cancer links β-catenin mutations and Wnt signaling with neuronal subtype of bladder cancer
inferred← citeshttps://doi.org/10.1038/s41598-020-77777-6openalex-snapshot
Comparative analysis of transcriptomic profile, histology, and IDH mutation for classification of gliomas
inferred← citeshttps://doi.org/10.1038/s41598-020-78654-yopenalex-snapshot
Multiplex gene and phenotype network to characterize shared genetic pathways of epilepsy and autism
inferred← citeshttps://doi.org/10.1038/s41598-021-80974-6openalex-snapshot
Overexpression of β-Arrestins inhibits proliferation and motility in triple negative breast cancer cells
inferred← citeshttps://doi.org/10.1038/s41598-021-83366-yopenalex-snapshot
Elevation in viral entry genes and innate immunity compromise underlying increased infectivity and severity of COVID-19 in cancer patients
inferred← citeshttps://doi.org/10.1038/s41598-021-84693-wopenalex-snapshot
Single-cell differential splicing analysis reveals high heterogeneity of liver tumor-infiltrating T cells
inferred← citeshttps://doi.org/10.1038/s41598-021-87698-7openalex-snapshot
BRCA1 degradation in response to mitochondrial damage in breast cancer cells
inferred← citeshttps://doi.org/10.1038/s41598-022-17927-0openalex-snapshot
Four-copy number alteration (CNA)-related lncRNA prognostic signature for liver cancer
inferred← citeshttps://doi.org/10.1038/s42003-022-03843-6openalex-snapshot
Reversible epigenetic alterations regulate class I HLA loss in prostate cancer
inferred← citeshttps://doi.org/10.1038/s42256-022-00541-0openalex-snapshot
A context-aware deconfounding autoencoder for robust prediction of personalized clinical drug response from cell-line compound screening
inferred← citeshttps://doi.org/10.1038/s43018-020-0106-7openalex-snapshot
Targeting purine synthesis in ASS1-expressing tumors enhances the response to immune checkpoint inhibitors
inferred← citeshttps://doi.org/10.1038/s43018-022-00360-7openalex-snapshot
Phosphate dysregulation via the XPR1–KIDINS220 protein complex is a therapeutic vulnerability in ovarian cancer
inferred← citeshttps://doi.org/10.1073/pnas.1901695116openalex-snapshot
In silico learning of tumor evolution through mutational time series
inferred← citeshttps://doi.org/10.1073/pnas.1909998116openalex-snapshot
Discovering long noncoding RNA predictors of anticancer drug sensitivity beyond protein-coding genes
inferred← citeshttps://doi.org/10.1073/pnas.1913940117openalex-snapshot
CD29 identifies IFN-γ–producing human CD8 + T cells with an increased cytotoxic potential
inferred← citeshttps://doi.org/10.1073/pnas.2013644117openalex-snapshot
CXCR4 inhibition in human pancreatic and colorectal cancers induces an integrated immune response
inferred← citeshttps://doi.org/10.1073/pnas.2014408118openalex-snapshot
Interplay between desmoglein2 and hypoxia controls metastasis in breast cancer
inferred← citeshttps://doi.org/10.1074/mcp.ra118.001232openalex-snapshot
Correlation Analysis of Histopathology and Proteogenomics Data for Breast Cancer
inferred← citeshttps://doi.org/10.1080/10428194.2022.2045594openalex-snapshot
Upregulation of FHL1 , SPNS3 , and MPZL2 predicts poor prognosis in pediatric acute myeloid leukemia patients with FLT3-ITD mutation
inferred← citeshttps://doi.org/10.1080/14756366.2019.1577831openalex-snapshot
Aberrant regulation favours matriptase proteolysis in neoplastic B-cells that co-express HAI-2
inferred← citeshttps://doi.org/10.1080/15384047.2020.1838032openalex-snapshot
Obesity and metabolic syndrome related macrophage promotes PD-L1 expression in TNBC through IL6/JAK/STAT pathway and can be reversed by telmisartan
inferred← citeshttps://doi.org/10.1080/21655979.2021.2020391openalex-snapshot
Secreted phosphoprotein 1 as a potential prognostic and immunotherapy biomarker in multiple human cancers
inferred← citeshttps://doi.org/10.1080/26895293.2021.1933208openalex-snapshot
UBE2T And CYP3A4: hub genes regulating the transformation of cirrhosis into hepatocellular carcinoma
inferred← citeshttps://doi.org/10.1089/dna.2019.5187openalex-snapshot
PLA2G4A Is a Potential Biomarker Predicting Shorter Overall Survival in Patients with Non-M3/ NPM1 Wildtype Acute Myeloid Leukemia
inferred← citeshttps://doi.org/10.1089/omi.2024.0201openalex-snapshot
A Regulatory Circuits Analysis Tool, “miRCuit,” Helps Reveal Breast Cancer Pathways: Toward Systems Medicine in Oncology
inferred← citeshttps://doi.org/10.1093/abbs/gmaa036openalex-snapshot
Reverse engineering a predictive signature characterized by proliferation, DNA damage, and immune escape from stage I lung adenocarcinoma recurrence
inferred← citeshttps://doi.org/10.1093/bib/bbaa080openalex-snapshot
The road towards data integration in human genomics: players, steps and interactions
inferred← citeshttps://doi.org/10.1093/bib/bbac129openalex-snapshot
CAMOIP: a web server for comprehensive analysis on multi-omics of immunotherapy in pan-cancer
inferred← citeshttps://doi.org/10.1093/bioadv/vbad006openalex-snapshot
Pancancer survival prediction using a deep learning architecture with multimodal representation and integration
inferred← citeshttps://doi.org/10.1093/bioinformatics/btab086openalex-snapshot
Multi-layered network-based pathway activity inference using directed random walks: application to predicting clinical outcomes in urologic cancer
inferred← citeshttps://doi.org/10.1093/bioinformatics/btab561openalex-snapshot
UCSCXenaShiny: an R/CRAN package for interactive analysis of UCSC Xena data
inferred← citeshttps://doi.org/10.1093/bioinformatics/btab580openalex-snapshot
A cross-level information transmission network for hierarchical omics data integration and phenotype prediction from a new genotype
inferred← citeshttps://doi.org/10.1093/bioinformatics/btz314openalex-snapshot
Large-scale inference of competing endogenous RNA networks with sparse partial correlation
inferred← citeshttps://doi.org/10.1093/bioinformatics/btz809openalex-snapshot
Network-based multi-task learning models for biomarker selection and cancer outcome prediction
inferred← citeshttps://doi.org/10.1093/bioinformatics/btz883openalex-snapshot
Proactive visual and statistical analysis of genomic data in Epiviz
inferred← citeshttps://doi.org/10.1093/cei/uxad019openalex-snapshot
Tumor gene signatures that correlate with release of extracellular vesicles shape the immune landscape in head and neck squamous cell carcinoma
inferred← citeshttps://doi.org/10.1093/femsle/fnac023openalex-snapshot
The intestinal microbiota influences the microenvironment of metastatic colon cancer by targeting miRNAs
inferred← citeshttps://doi.org/10.1093/narcan/zcab017openalex-snapshot
Identification of combinations of somatic mutations that predict cancer survival and immunotherapy benefit
inferred← citeshttps://doi.org/10.1093/narcan/zcab033openalex-snapshot
Androgen signaling connects short isoform production to breakpoint formation at Ewing sarcoma breakpoint region 1
inferred← citeshttps://doi.org/10.1093/nargab/lqad081openalex-snapshot
Alternative splicing impacts microRNA regulation within coding regions
inferred← citeshttps://doi.org/10.1097/md.0000000000032045openalex-snapshot
Identification of prognostic values of the transcription factor-CpG-gene triplets in lung adenocarcinoma: A narrative review
inferred← citeshttps://doi.org/10.1097/md.0000000000035422openalex-snapshot
Biological functions and molecular subtypes regulated by miR-142-3p in colon cancer
inferred← citeshttps://doi.org/10.1101/163907openalex-snapshot
A user’s guide to the online resources for data exploration, visualization, and discovery for the Pan-Cancer Analysis of Whole Genomes project (PCAWG)
inferred← citeshttps://doi.org/10.1101/2020.01.17.910950openalex-snapshot
Robust classification of Immune Subtypes in Cancer
inferred← citeshttps://doi.org/10.1101/2020.02.24.963454openalex-snapshot
SR-B1 uptake of HDL promotes prostate cancer proliferation and tumor progression
inferred← citeshttps://doi.org/10.1101/2020.03.08.982116openalex-snapshot
Cancer Stem Cell Enrichment and Metabolic Substrate Adaptability are Driven by Hydrogen Sulfide Suppression in Glioblastoma
inferred← citeshttps://doi.org/10.1101/2020.07.07.191023openalex-snapshot
Noncanonical targeting contributes significantly to miRNA-mediated regulation
inferred← citeshttps://doi.org/10.1101/2020.07.12.198903openalex-snapshot
FADS2-mediated fatty acid desaturation and cholesterol esterification are signatures of metabolic reprogramming during melanoma progression
inferred← citeshttps://doi.org/10.1101/2020.08.10.244343openalex-snapshot
Data Integration with SUMO Detects Latent Relationships Between Patients in Lower-Grade Gliomas
inferred← citeshttps://doi.org/10.1101/2020.10.12.336263openalex-snapshot
Deep computational analysis of human cancer and non-cancer tissues details dysregulation of eIF4F components and their interactions in human cancers
inferred← citeshttps://doi.org/10.1101/2020.10.24.353292openalex-snapshot
A comprehensive investigation of colorectal cancer progression, from the early to late-stage, a systems biology approach
inferred← citeshttps://doi.org/10.1101/2020.10.27.356717openalex-snapshot
ASTER: A Method to Predict Clinically Actionable Synthetic Lethal Genetic Interactions
inferred← citeshttps://doi.org/10.1101/2021.05.13.444089openalex-snapshot
Expression of GRINA Correlates with Prognosis in Human Cancers: A Pan-cancer Analysis
inferred← citeshttps://doi.org/10.1101/2021.05.20.445055openalex-snapshot
Robust Prediction of Patient-Specific Clinical Response to Unseen Drugs From in vitro Screens Using Context-aware Deconfounding Autoencoder
inferred← citeshttps://doi.org/10.1101/2022.04.23.489290openalex-snapshot
Identifying Proteasome 26S Subunit, ATPase ( PSMC ) Family Genes as the Prognostic Indicators and Therapeutic Targets in Lung Adenocarcinoma
inferred← citeshttps://doi.org/10.1101/2022.06.18.496693openalex-snapshot
A Multi-omics Study on the Oncogenic Roles and Clinical Significance of Dynactin Family Gene ( DCTN1-6 ) Expression in Liver Hepatocellular Carcinoma
inferred← citeshttps://doi.org/10.1101/2025.06.14.658531openalex-snapshot
UniCure: A Foundation Model for Predicting Personalized Cancer Therapy Response
inferred← citeshttps://doi.org/10.1101/615435openalex-snapshot
pathwayPCA: an R package for integrative pathway analysis with modern PCA methodology and gene selection
inferred← citeshttps://doi.org/10.1101/678029openalex-snapshot
Mixture Network Regularization of Generalized Linear Model With Application in Genomics Data
inferred← citeshttps://doi.org/10.1101/683508openalex-snapshot
The USP28-ΔNp63 axis is a vulnerability of squamous tumours
inferred← citeshttps://doi.org/10.1101/821165openalex-snapshot
Cross-kingdom regulation of tRNAs/tRFs derived from Chinese yew
inferred← citeshttps://doi.org/10.1101/840975openalex-snapshot
Cellular Fitness Phenotypes of Cancer Target Genes from Oncobiology to Cancer Therapeutics
inferred← citeshttps://doi.org/10.1109/bibm47256.2019.8983413openalex-snapshot
Feature Selection and Classification Reveal Key lncRNAs for Multiple Cancers
inferred← citeshttps://doi.org/10.1109/iceca58529.2023.10395202openalex-snapshot
Gene Expression Analysis Using Machine Learning : A Multi-Dataset Approach
inferred← citeshttps://doi.org/10.1109/jbhi.2021.3052008openalex-snapshot
A Hierarchical Graph Convolution Network for Representation Learning of Gene Expression Data
inferred← citeshttps://doi.org/10.1109/tpami.2019.2960358openalex-snapshot
Estimating Feature-Label Dependence Using Gini Distance Statistics
inferred← citeshttps://doi.org/10.1111/cas.14506openalex-snapshot
Potential dual functional roles of the Y‐linked RBMY in hepatocarcinogenesis
inferred← citeshttps://doi.org/10.1111/cgf.13727openalex-snapshot
Tasks, Techniques, and Tools for Genomic Data Visualization
inferred← citeshttps://doi.org/10.1111/jcmm.14491openalex-snapshot
Systematic profiling identifies PDLIM2 as a novel prognostic predictor for oesophageal squamous cell carcinoma (ESCC)
inferred← citeshttps://doi.org/10.1111/jcmm.14746openalex-snapshot
Pan‐cancer RNA‐seq data stratifies tumours by some hallmarks of cancer
inferred← citeshttps://doi.org/10.1111/jcmm.14814openalex-snapshot
Systematic screening identifies a 2‐gene signature as a high‐potential prognostic marker of undifferentiated pleomorphic sarcoma/myxofibrosarcoma
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