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Narcolepsy risk loci are enriched in immune cells and suggest autoimmune modulation of the T cell receptor repertoire

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1001/jamaneurol.2013.2831openalex-snapshot
Hypothalamic Immunopathology in Anti-Ma–Associated Diencephalitis With Narcolepsy-Cataplexy
inferredcites →https://doi.org/10.1002/ana.22587openalex-snapshot
Narcolepsy onset is seasonal and increased following the 2009 H1N1 pandemic in china
inferredcites →https://doi.org/10.1002/art.38264openalex-snapshot
Genome‐Wide DNA Methylation Patterns in Naive CD4+ T Cells From Patients With Primary Sjögren's Syndrome
inferredcites →https://doi.org/10.1007/s11910-018-0851-5openalex-snapshot
Narcolepsy Associated with Pandemrix Vaccine
inferredcites →https://doi.org/10.1016/j.ajhg.2010.11.011openalex-snapshot
GCTA: A Tool for Genome-wide Complex Trait Analysis
inferredcites →https://doi.org/10.1016/j.ajhg.2011.02.002openalex-snapshot
Estimating Missing Heritability for Disease from Genome-wide Association Studies
inferredcites →https://doi.org/10.1016/j.ajhg.2014.12.010openalex-snapshot
HLA-DPB1 and HLA Class I Confer Risk of and Protection from Narcolepsy
inferredcites →https://doi.org/10.1016/j.ajhg.2015.10.016openalex-snapshot
Multiple Hepatic Regulatory Variants at the GALNT2 GWAS Locus Associated with High-Density Lipoprotein Cholesterol
inferredcites →https://doi.org/10.1016/j.ebiom.2018.01.043openalex-snapshot
Prostaglandin D2 Receptor DP1 Antibodies Predict Vaccine-induced and Spontaneous Narcolepsy Type 1: Large-scale Study of Antibody Profiling
inferredcites →https://doi.org/10.1016/j.euroneuro.2017.08.379openalex-snapshot
GENETICS OF VACCINATION RELATED NARCOLEPSY
inferredcites →https://doi.org/10.1016/j.humimm.2012.10.011openalex-snapshot
Functional impact of A91V mutation of the PRF1 perforin gene
inferredcites →https://doi.org/10.1016/j.jaut.2014.01.031openalex-snapshot
A/H1N1 antibodies and TRIB2 autoantibodies in narcolepsy patients diagnosed in conjunction with the Pandemrix vaccination campaign in Sweden 2009–2010
inferredcites →https://doi.org/10.1016/j.jaut.2015.03.003openalex-snapshot
Impact of cytokine in type 1 narcolepsy: Role of pandemic H1N1 vaccination ?
inferredcites →https://doi.org/10.1016/j.jaut.2016.01.002openalex-snapshot
Refined mapping of autoimmune disease associated genetic variants with gene expression suggests an important role for non-coding RNAs
inferredcites →https://doi.org/10.1016/j.sleep.2013.03.020openalex-snapshot
Incidence of narcolepsy in Norwegian children and adolescents after vaccination against H1N1 influenza A
inferredcites →https://doi.org/10.1016/j.vaccine.2016.08.062openalex-snapshot
Patterns of spontaneous reports on narcolepsy following administration of pandemic influenza vaccine; a case series of individual case safety reports in Eudravigilance
inferredcites →https://doi.org/10.1034/j.1399-302x.2000.150501.xopenalex-snapshot
Herpesviruses: a unifying causative factor in periodontitis?
inferredcites →https://doi.org/10.1038/79690openalex-snapshot
A mutation in a case of early onset narcolepsy and a generalized absence of hypocretin peptides in human narcoleptic brains
inferredcites →https://doi.org/10.1038/gene.2008.35openalex-snapshot
Variations of the perforin gene in patients with multiple sclerosis
inferredcites →https://doi.org/10.1038/gene.2017.1openalex-snapshot
The immunogenetics of narcolepsy associated with A(H1N1)pdm09 vaccination (Pandemrix) supports a potent gene–environment interaction
inferredcites →https://doi.org/10.1038/jhg.2015.100openalex-snapshot
Associations of human leukocyte antigens with autoimmune diseases: challenges in identifying the mechanism
inferredcites →https://doi.org/10.1038/nature05911openalex-snapshot
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
inferredcites →https://doi.org/10.1038/ncomms9442openalex-snapshot
Genetic sharing and heritability of paediatric age of onset autoimmune diseases
inferredcites →https://doi.org/10.1038/ng.2354openalex-snapshot
Fast and accurate genotype imputation in genome-wide association studies through pre-phasing
inferredcites →https://doi.org/10.1038/ng.2667openalex-snapshot
Identification of multiple risk variants for ankylosing spondylitis through high-density genotyping of immune-related loci
inferredcites →https://doi.org/10.1038/ng.3353openalex-snapshot
Additive and interaction effects at three amino acid positions in HLA-DQ and HLA-DR molecules drive type 1 diabetes risk
inferredcites →https://doi.org/10.1038/ng.3379openalex-snapshot
Widespread non-additive and interaction effects within HLA loci modulate the risk of autoimmune diseases
inferredcites →https://doi.org/10.1038/ng.3404openalex-snapshot
Partitioning heritability by functional annotation using genome-wide association summary statistics
inferredcites →https://doi.org/10.1038/ng.3406openalex-snapshot
An atlas of genetic correlations across human diseases and traits
inferredcites →https://doi.org/10.1038/ng.3424openalex-snapshot
Multi-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis
inferredcites →https://doi.org/10.1038/ng.3528openalex-snapshot
Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci
inferredcites →https://doi.org/10.1038/ng.3625openalex-snapshot
Genetic variation in MHC proteins is associated with T cell receptor expression biases
inferredcites →https://doi.org/10.1038/ng.372openalex-snapshot
Narcolepsy is strongly associated with the T-cell receptor alpha locus
inferredcites →https://doi.org/10.1038/ng.572openalex-snapshot
Meta-analysis and imputation refines the association of 15q25 with smoking quantity
inferredcites →https://doi.org/10.1038/ng.647openalex-snapshot
Genome-wide association study identifies new HLA class II haplotypes strongly protective against narcolepsy
inferredcites →https://doi.org/10.1038/ng.734openalex-snapshot
Common variants in P2RY11 are associated with narcolepsy
inferredcites →https://doi.org/10.1038/nrg2796openalex-snapshot
Genotype imputation for genome-wide association studies
inferredcites →https://doi.org/10.1038/s41467-017-00366-1openalex-snapshot
Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations
inferredcites →https://doi.org/10.1038/srep32894openalex-snapshot
Fast set-based association analysis using summary data from GWAS identifies novel gene loci for human complex traits
inferredcites →https://doi.org/10.1038/tpj.2013.18openalex-snapshot
HIBAG—HLA genotype imputation with attribute bagging
inferredcites →https://doi.org/10.1073/pnas.1206614109openalex-snapshot
High-throughput, high-fidelity HLA genotyping with deep sequencing
inferredcites →https://doi.org/10.1073/pnas.1603325113openalex-snapshot
CD8 T cell-mediated killing of orexinergic neurons induces a narcolepsy-like phenotype in mice
inferredcites →https://doi.org/10.1073/pnas.91.24.11571openalex-snapshot
A null mutation in the perforin gene impairs cytolytic T lymphocyte- and natural killer cell-mediated cytotoxicity.
inferredcites →https://doi.org/10.1074/jbc.m113.528000openalex-snapshot
Common Polymorphisms in Human Langerin Change Specificity for Glycan Ligands
inferredcites →https://doi.org/10.1074/jbc.m511502200openalex-snapshot
Polymorphisms in Human Langerin Affect Stability and Sugar Binding Activity
inferredcites →https://doi.org/10.1084/jem.20071365openalex-snapshot
Clearance of influenza virus from the lung depends on migratory langerin+CD11b− but not plasmacytoid dendritic cells
inferredcites →https://doi.org/10.1084/jem.20160897openalex-snapshot
High-dimensional single-cell analysis reveals the immune signature of narcolepsy
inferredcites →https://doi.org/10.1086/318799openalex-snapshot
Complex HLA-DR and -DQ Interactions Confer Risk of Narcolepsy-Cataplexy in Three Ethnic Groups
inferredcites →https://doi.org/10.1093/bioinformatics/btu486openalex-snapshot
AffyPipe: an open-source pipeline for Affymetrix Axiom genotyping workflow
inferredcites →https://doi.org/10.1093/bioinformatics/btw613openalex-snapshot
LD Hub: a centralized database and web interface to perform LD score regression that maximizes the potential of summary level GWAS data for SNP heritability and genetic correlation analysis
inferredcites →https://doi.org/10.1093/biostatistics/kxn039openalex-snapshot
Statistical independence of the colocalized association signals for type 1 diabetes and RPS26 gene expression on chromosome 12q13
inferredcites →https://doi.org/10.1093/brain/awt187openalex-snapshot
Increased risk of narcolepsy in children and adults after pandemic H1N1 vaccination in France
inferredcites →https://doi.org/10.1093/hmg/ddw152openalex-snapshot
Genetic risk variants for autoimmune diseases that influence gene expression in thymus
inferredcites →https://doi.org/10.1093/sleep/17.suppl_8.s7openalex-snapshot
Epidemiology of Narcolepsy
inferredcites →https://doi.org/10.1093/sleep/25.2.197openalex-snapshot
The Epidemiology of Narcolepsy in Olmsted County, Minnesota: A Population-Based Study
inferredcites →https://doi.org/10.1093/sleep/32.8.979openalex-snapshot
Elevated Anti-Streptococcal Antibodies in Patients with Recent Narcolepsy Onset
inferredcites →https://doi.org/10.1093/sleep/33.7.869openalex-snapshot
Anti-Tribbles Homolog 2 (TRIB2) Autoantibodies in Narcolepsy are Associated with Recent Onset of Cataplexy
inferredcites →https://doi.org/10.1101/085738openalex-snapshot
GARFIELD - GWAS Analysis of Regulatory or Functional Information Enrichment with LD correction
inferredcites →https://doi.org/10.1111/dmcn.12522openalex-snapshot
Clinical features of narcolepsy in children vaccinated with AS 03 adjuvanted pandemic A / H 1 N 1 2009 influenza vaccine in E ngland
inferredcites →https://doi.org/10.1111/j.0006-341x.2005.t01-1-.xopenalex-snapshot
Genomic Control for Association Studies under Various Genetic Models
inferredcites →https://doi.org/10.1111/j.1399-302x.2004.00143.xopenalex-snapshot
Update on human cytomegalovirus in destructive periodontal disease
inferredcites →https://doi.org/10.1111/j.2040-1124.2011.00139.xopenalex-snapshot
Class II HLA genotype in fulminant type 1 diabetes: A nationwide survey with reference to glutamic acid decarboxylase antibodies
inferredcites →https://doi.org/10.1111/joim.12150openalex-snapshot
Risks of neurological and immune‐related diseases, including narcolepsy, after vaccination with P andemrix: a population‐ and registry‐based cohort study with over 2 years of follow‐up
inferredcites →https://doi.org/10.1111/joim.12355openalex-snapshot
Increased β‐haemolytic group A streptococcal M6 serotype and streptodornase B‐specific cellular immune responses in Swedish narcolepsy cases
inferredcites →https://doi.org/10.1111/jsr.12143openalex-snapshot
Narcolepsy with cataplexy and comorbid immunopathological diseases
inferredcites →https://doi.org/10.1126/science.1246980openalex-snapshot
Common Genetic Variants Modulate Pathogen-Sensing Responses in Human Dendritic Cells
inferredcites →https://doi.org/10.1126/science.1254665openalex-snapshot
Intersection of population variation and autoimmunity genetics in human T cell activation
inferredcites →https://doi.org/10.1126/science.1262110openalex-snapshot
The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
inferredcites →https://doi.org/10.1126/scitranslmed.aab2354openalex-snapshot
Antibodies to influenza nucleoprotein cross-react with human hypocretin receptor 2
inferredcites →https://doi.org/10.1128/jvi.01447-15openalex-snapshot
The C-type Lectin Langerin Functions as a Receptor for Attachment and Infectious Entry of Influenza A Virus
inferredcites →https://doi.org/10.1128/jvi.01501-14openalex-snapshot
Differential Responses of Plasmacytoid Dendritic Cells to Influenza Virus and Distinct Viral Pathogens
inferredcites →https://doi.org/10.1136/bmj.f794openalex-snapshot
Risk of narcolepsy in children and young people receiving AS03 adjuvanted pandemic A/H1N1 2009 influenza vaccine: retrospective analysis
inferredcites →https://doi.org/10.1136/gut.2010.227256openalex-snapshot
Variants in ZNF365 isoform D are associated with Crohn's disease
inferredcites →https://doi.org/10.1159/000111581openalex-snapshot
A Case-Control Study of the Environmental Risk Factors for Narcolepsy
inferredcites →https://doi.org/10.1172/jci41366openalex-snapshot
Elevated Tribbles homolog 2–specific antibody levels in narcolepsy patients
inferredcites →https://doi.org/10.1172/jci62860openalex-snapshot
Viral acute lower respiratory infections impair CD8+ T cells through PD-1
inferredcites →https://doi.org/10.1172/jci86282openalex-snapshot
An inflammatory bowel disease–risk variant in INAVA decreases pattern recognition receptor–induced outcomes
inferredcites →https://doi.org/10.1177/154405910808701017openalex-snapshot
Cathepsin C Gene Variants in Aggressive Periodontitis
inferredcites →https://doi.org/10.1182/blood-2002-04-1030openalex-snapshot
Adult onset and atypical presentation of hemophagocytic lymphohistiocytosis in siblings carryingPRF1 mutations
inferredcites →https://doi.org/10.1182/blood-2003-10-3413openalex-snapshot
An animal model of hemophagocytic lymphohistiocytosis (HLH): CD8+ T cells and interferon gamma are essential for the disorder
inferredcites →https://doi.org/10.1182/blood-2007-02-072850openalex-snapshot
Perforin activity and immune homeostasis: the common A91V polymorphism in perforin results in both presynaptic and postsynaptic defects in function
inferredcites →https://doi.org/10.1182/blood-2013-04-495309openalex-snapshot
Perforin deficiency impairs a critical immunoregulatory loop involving murine CD8+ T cells and dendritic cells
inferredcites →https://doi.org/10.1186/preaccept-4701398771324073openalex-snapshot
Expression profiles of long non-coding RNAs located in autoimmune disease-associated regions reveal immune cell-type specificity
inferredcites →https://doi.org/10.1186/s13742-015-0047-8openalex-snapshot
Second-generation PLINK: rising to the challenge of larger and richer datasets
inferredcites →https://doi.org/10.1212/wnl.0000000000003432openalex-snapshot
Comorbidity between central disorders of hypersomnolence and immune-based disorders
inferredcites →https://doi.org/10.1212/wnl.58.12.1826openalex-snapshot
Prevalence of narcolepsy symptomatology and diagnosis in the European general population
inferredcites →https://doi.org/10.1371/journal.pcbi.1002877openalex-snapshot
Multi-Population Classical HLA Type Imputation
inferredcites →https://doi.org/10.1371/journal.pgen.1003270openalex-snapshot
ImmunoChip Study Implicates Antigen Presentation to T Cells in Narcolepsy
inferredcites →https://doi.org/10.1371/journal.pgen.1003880openalex-snapshot
Genome Wide Analysis of Narcolepsy in China Implicates Novel Immune Loci and Reveals Changes in Association Prior to Versus After the 2009 H1N1 Influenza Pandemic
inferredcites →https://doi.org/10.1371/journal.pgen.1005223openalex-snapshot
Cell Specific eQTL Analysis without Sorting Cells
inferredcites →https://doi.org/10.1371/journal.pgen.1006643openalex-snapshot
Pathogenic implications for autoimmune mechanisms derived by comparative eQTL analysis of CD4+ versus CD8+ T cells
inferredcites →https://doi.org/10.1371/journal.pone.0033536openalex-snapshot
AS03 Adjuvanted AH1N1 Vaccine Associated with an Abrupt Increase in the Incidence of Childhood Narcolepsy in Finland
inferredcites →https://doi.org/10.1371/journal.pone.0033723openalex-snapshot
Increased Incidence and Clinical Picture of Childhood Narcolepsy following the 2009 H1N1 Pandemic Vaccination Campaign in Finland
inferredcites →https://doi.org/10.1371/journal.pone.0108489openalex-snapshot
Risk of Narcolepsy Associated with Inactivated Adjuvanted (AS03) A/H1N1 (2009) Pandemic Influenza Vaccine in Quebec
inferredcites →https://doi.org/10.14740/jocmr2569wopenalex-snapshot
Comorbidity of Narcolepsy Type 1 With Autoimmune Diseases and Other Immunopathological Disorders: A Case-Control Study
inferredcites →https://doi.org/10.1534/g3.111.001198openalex-snapshot
Genotype Imputation with Thousands of Genomes
inferredcites →https://doi.org/10.2337/db07-0947openalex-snapshot
Variations of the Perforin Gene in Patients With Type 1 Diabetes
inferredcites →https://doi.org/10.2337/db15-1313openalex-snapshot
Genome-wide Association Studies Identify Genetic Loci Associated With Albuminuria in Diabetes
inferredcites →https://doi.org/10.2353/ajpath.2009.090147openalex-snapshot
Signal Regulatory Protein-β1
inferredcites →https://doi.org/10.2807/1560-7917.es2014.19.17.20789openalex-snapshot
Investigation of an association between onset of narcolepsy and vaccination with pandemic influenza vaccine, Ireland April 2009-December 2010
inferredcites →https://doi.org/10.3389/fimmu.2014.00616openalex-snapshot
Cysteine Cathepsins as Regulators of the Cytotoxicity of NK and T Cells
inferredcites →https://doi.org/10.3389/fimmu.2017.01146openalex-snapshot
Genomic Programming of Human Neonatal Dendritic Cells in Congenital Systemic and In Vitro Cytomegalovirus Infection Reveal Plastic and Robust Immune Pathway Biology Responses
inferredcites →https://doi.org/10.4049/jimmunol.1400630openalex-snapshot
Inhibition of Two Temporal Phases of HIV-1 Transfer from Primary Langerhans Cells to T Cells: The Role of Langerin
inferredcites →https://doi.org/10.4049/jimmunol.173.4.2562openalex-snapshot
Human Lymphocytes Interact Directly with CD47 through a Novel Member of the Signal Regulatory Protein (SIRP) Family
inferredcites →https://doi.org/10.4103/1305-7456.126250openalex-snapshot
Heterozygous Ile453Val codon mutation in exon 7, homozygous single nucleotide polymorphisms in intron 2 and 5 of cathepsin C are associated with Haim-Munk syndrome
inferredcites →https://doi.org/10.5665/sleep.4342openalex-snapshot
HLA-DQ Allele Competition in Narcolepsy: A Comment on Tafti et al. DQB1 locus alone explains most of the risk and protection in narcolepsy with cataplexy in Europe
inferredcites →https://doi.org/10.5665/sleep.5532openalex-snapshot
Narcolepsy-Associated HLA Class I Alleles Implicate Cell-Mediated Cytotoxicity

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/acn3.50908openalex-snapshot
Children with Narcolepsy type 1 have increased T‐cell responses to orexins
inferred← citeshttps://doi.org/10.1007/s12033-023-01009-1openalex-snapshot
Waking Up the Sleep Field: An Overview on the Implications of Genetics and Bioinformatics of Sleep
inferred← citeshttps://doi.org/10.1016/j.ibneur.2022.09.003openalex-snapshot
An opinion on the debatable function of brain resident immune protein, T-cell receptor beta subunit in the central nervous system
inferred← citeshttps://doi.org/10.1016/j.jaut.2019.03.010openalex-snapshot
Shared T cell receptor chains in blood memory CD4+ T cells of narcolepsy type 1 patients
inferred← citeshttps://doi.org/10.1016/j.jneuroim.2019.04.019openalex-snapshot
Response to “H1N1 hemagglutinin-specific HLA-DQ6-restricted CD4+ T cells can be readily detected in narcolepsy type 1 patients and healthy controls”
inferred← citeshttps://doi.org/10.1038/s41467-019-11456-7openalex-snapshot
Genome-wide association analysis of self-reported daytime sleepiness identifies 42 loci that suggest biological subtypes
inferred← citeshttps://doi.org/10.1038/s41598-021-87481-8openalex-snapshot
T cell reactivity to regulatory factor X4 in type 1 narcolepsy
inferred← citeshttps://doi.org/10.1051/jbio/2019026openalex-snapshot
Narcolepsie : une maladie auto-immune affectant un peptide de l’éveil liée à un mimétisme moléculaire avec des épitopes du virus de la grippe
inferred← citeshttps://doi.org/10.1073/pnas.1818150116openalex-snapshot
Autoimmunity to hypocretin and molecular mimicry to flu in type 1 narcolepsy
inferred← citeshttps://doi.org/10.1073/pnas.2205797119openalex-snapshot
Characterization of T cell receptors reactive to HCRT NH2 , pHA 273-287 , and NP 17-31 in control and narcolepsy patients
inferred← citeshttps://doi.org/10.1093/brain/awab455openalex-snapshot
Influenza vaccination induces autoimmunity against orexinergic neurons in a mouse model for narcolepsy
inferred← citeshttps://doi.org/10.1093/sleep/zsaa099openalex-snapshot
Narcolepsy type 1: what have we learned from genetics?
inferred← citeshttps://doi.org/10.1101/378109openalex-snapshot
Autoimmunity to hypocretin and molecular mimicry to flu antigens in Type 1 narcolepsy
inferred← citeshttps://doi.org/10.3390/vaccines8040630openalex-snapshot
Mass Spectrometric Characterization of Narcolepsy-Associated Pandemic 2009 Influenza Vaccines
inferred← citeshttps://doi.org/10.5664/jcsm.8668openalex-snapshot
Narcolepsy risk and COVID-19
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