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Genetics of 38 blood and urine biomarkers in the UK Biobank

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Contrasting the Genetic Architecture of 30 Complex Traits from Summary Association Data

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Inferring Relevant Cell Types for Complex Traits by Using Single-Cell Gene Expression

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Local Genetic Correlation Gives Insights into the Shared Genetic Architecture of Complex Traits

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Phenome-wide Burden of Copy-Number Variation in the UK Biobank

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Multi-polygenic score approach to trait prediction

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Genome-wide study for circulating metabolites identifies 62 loci and reveals novel systemic effects of LPA

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Meta-analysis identifies multiple loci associated with kidney function–related traits in east Asian populations

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Large-scale association analyses identify new loci influencing glycemic traits and provide insight into the underlying biological pathways

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Genome-wide association analyses identify 18 new loci associated with serum urate concentrations

inferredcites →https://doi.org/10.1038/ng.2797openalex-snapshot

Discovery and refinement of loci associated with lipid levels

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LD Score regression distinguishes confounding from polygenicity in genome-wide association studies

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An atlas of genetic correlations across human diseases and traits

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A reference panel of 64,976 haplotypes for genotype imputation

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Exome-wide association study of plasma lipids in >300,000 individuals

inferredcites →https://doi.org/10.1038/ng.3978openalex-snapshot

Exome chip meta-analysis identifies novel loci and East Asian–specific coding variants that contribute to lipid levels and coronary artery disease

inferredcites →https://doi.org/10.1038/ng1297-384openalex-snapshot

Mutation in hepatocyte nuclear factor–1β gene (TCF2) associated with MODY

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Low LDL cholesterol in individuals of African descent resulting from frequent nonsense mutations in PCSK9

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AKT2 is essential to maintain podocyte viability and function during chronic kidney disease

inferredcites →https://doi.org/10.1038/nrendo.2017.88openalex-snapshot

Is ANGPTL3 the next PCSK9?

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Genome-wide association study in 79,366 European-ancestry individuals informs the genetic architecture of 25-hydroxyvitamin D levels

inferredcites →https://doi.org/10.1038/s41467-018-03910-9openalex-snapshot

Medical relevance of protein-truncating variants across 337,205 individuals in the UK Biobank study

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Sex-specific and pleiotropic effects underlying kidney function identified from GWAS meta-analysis

inferredcites →https://doi.org/10.1038/s41467-019-11953-9openalex-snapshot

Components of genetic associations across 2,138 phenotypes in the UK Biobank highlight adipocyte biology

inferredcites →https://doi.org/10.1038/s41586-018-0579-zopenalex-snapshot

The UK Biobank resource with deep phenotyping and genomic data

inferredcites →https://doi.org/10.1038/s41588-018-0047-6openalex-snapshot

Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases

inferredcites →https://doi.org/10.1038/s41588-018-0081-4openalex-snapshot

Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types

inferredcites →https://doi.org/10.1038/s41588-018-0092-1openalex-snapshot

Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights

inferredcites →https://doi.org/10.1038/s41588-018-0099-7openalex-snapshot

Detection of widespread horizontal pleiotropy in causal relationships inferred from Mendelian randomization between complex traits and diseases

inferredcites →https://doi.org/10.1038/s41588-018-0222-9openalex-snapshot

Genetics of blood lipids among ~300,000 multi-ethnic participants of the Million Veteran Program

inferredcites →https://doi.org/10.1038/s41588-018-0255-0openalex-snapshot

Distinguishing genetic correlation from causation across 52 diseases and complex traits

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Clinical use of current polygenic risk scores may exacerbate health disparities

inferredcites →https://doi.org/10.1038/s41588-019-0407-xopenalex-snapshot

A catalog of genetic loci associated with kidney function from analyses of a million individuals

inferredcites →https://doi.org/10.1038/srep45040openalex-snapshot

1000 Genomes-based meta-analysis identifies 10 novel loci for kidney function

inferredcites →https://doi.org/10.1053/j.gastro.2009.06.005openalex-snapshot

Prediction of Non-Alcoholic Fatty Liver Disease and Liver Fat Using Metabolic and Genetic Factors

inferredcites →https://doi.org/10.1056/nejm199303253281203openalex-snapshot

A Prospective Study of Dietary Calcium and Other Nutrients and the Risk of Symptomatic Kidney Stones

inferredcites →https://doi.org/10.1056/nejmoa054013openalex-snapshot

Sequence Variations in PCSK9, Low LDL, and Protection against Coronary Heart Disease

inferredcites →https://doi.org/10.1056/nejmoa1002926openalex-snapshot

Exome Sequencing, ANGPTL3 Mutations, and Familial Combined Hypolipidemia

inferredcites →https://doi.org/10.1056/nejmoa1507652openalex-snapshot

Coding Variation in ANGPTL4, LPL, and SVEP1 and the Risk of Coronary Disease

inferredcites →https://doi.org/10.1056/nejmoa1612790openalex-snapshot

Genetic and Pharmacologic Inactivation of ANGPTL3 and Cardiovascular Disease

inferredcites →https://doi.org/10.1080/07853890510037383openalex-snapshot

Fat in the liver and insulin resistance

inferredcites →https://doi.org/10.1089/dia.2008.0040openalex-snapshot

Evaluation of Urinary Biomarkers for Coronary Artery Disease, Diabetes, and Diabetic Kidney Disease

inferredcites →https://doi.org/10.1101/gr.1239303openalex-snapshot

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

inferredcites →https://doi.org/10.1111/j.0006-341x.1999.00997.xopenalex-snapshot

Genomic Control for Association Studies

inferredcites →https://doi.org/10.1111/j.1467-9868.2005.00503.xopenalex-snapshot

Regularization and Variable Selection Via the Elastic Net

inferredcites →https://doi.org/10.1111/j.2517-6161.1995.tb02031.xopenalex-snapshot

Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

inferredcites →https://doi.org/10.1111/j.2517-6161.1996.tb02080.xopenalex-snapshot

Regression Shrinkage and Selection Via the Lasso

inferredcites →https://doi.org/10.1126/science.aar2131openalex-snapshot

Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease

inferredcites →https://doi.org/10.1161/circgen.118.002376openalex-snapshot

Rare Protein-Truncating Variants in APOB , Lower Low-Density Lipoprotein Cholesterol, and Protection Against Coronary Heart Disease

inferredcites →https://doi.org/10.1172/jci37118openalex-snapshot

Rare loss-of-function mutations in ANGPTL family members contribute to plasma triglyceride levels in humans

inferredcites →https://doi.org/10.1177/000456328802500502openalex-snapshot

Oestradiol Assays: Applications and Guidelines for the Provision of a Clinical Biochemistry Service

inferredcites →https://doi.org/10.1186/1471-2350-8-s1-s17openalex-snapshot

A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study

inferredcites →https://doi.org/10.1186/s13326-015-0009-1openalex-snapshot

Expanding the mammalian phenotype ontology to support automated exchange of high throughput mouse phenotyping data generated by large-scale mouse knockout screens

inferredcites →https://doi.org/10.1189/jlb.3a0414-211rropenalex-snapshot

γδ T cells promote inflammation and insulin resistance during high fat diet-induced obesity in mice

inferredcites →https://doi.org/10.1211/pj.2015.20068181openalex-snapshot

PCSK9 inhibitors: the next cholesterol-lowering blockbusters?

inferredcites →https://doi.org/10.1371/journal.pgen.1005230openalex-snapshot

Discovery and Fine-Mapping of Glycaemic and Obesity-Related Trait Loci Using High-Density Imputation

inferredcites →https://doi.org/10.1371/journal.pgen.1007275openalex-snapshot

Identification and functional analysis of glycemic trait loci in the China Health and Nutrition Survey

inferredcites →https://doi.org/10.1371/journal.pgen.1009141openalex-snapshot

A fast and scalable framework for large-scale and ultrahigh-dimensional sparse regression with application to the UK Biobank

inferredcites →https://doi.org/10.1371/journal.pmed.1002383openalex-snapshot

Impact of common genetic determinants of Hemoglobin A1c on type 2 diabetes risk and diagnosis in ancestrally diverse populations: A transethnic genome-wide meta-analysis

inferredcites →https://doi.org/10.1371/journal.pone.0162388openalex-snapshot

Algorithms for the Capture and Adjudication of Prevalent and Incident Diabetes in UK Biobank

inferredcites →https://doi.org/10.1371/journal.pone.0172921openalex-snapshot

Characterisation of liver fat in the UK Biobank cohort

inferredcites →https://doi.org/10.1530/ec-17-0253openalex-snapshot

Testosterone level and risk of type 2 diabetes in men: a systematic review and meta-analysis

inferredcites →https://doi.org/10.1534/genetics.119.301859openalex-snapshot

Complex Trait Prediction from Genome Data: Contrasting EBV in Livestock to PRS in Humans

inferredcites →https://doi.org/10.1681/asn.2013101085openalex-snapshot

Mutations in SLC34A3/NPT2c Are Associated with Kidney Stones and Nephrocalcinosis

inferredcites →https://doi.org/10.18637/jss.v033.i01openalex-snapshot

Regularization Paths for Generalized Linear Models via Coordinate Descent

inferredcites →https://doi.org/10.2337/db15-1313openalex-snapshot

Genome-wide Association Studies Identify Genetic Loci Associated With Albuminuria in Diabetes

inferredcites →https://doi.org/10.2337/diab.47.8.1354openalex-snapshot

Frameshift Mutation, A263fsinsGG, in the Hepatocyte Nuclear Factor-1β Gene Associated With Diabetes and Renal Dysfunction

inferredcites →https://doi.org/10.2337/diacare.21.12.2144openalex-snapshot

Liver and Kidney Function in Japanese Patients With Maturity-Onset Diabetes of the Young

inferredcites →https://doi.org/10.3390/ijms18081702openalex-snapshot

Novel Biomarkers in the Diagnosis of Chronic Kidney Disease and the Prediction of Its Outcome

inferredcites →https://doi.org/10.7326/0003-4819-150-9-200905050-00006openalex-snapshot

A New Equation to Estimate Glomerular Filtration Rate

inferredcites →https://doi.org/10.7554/elife.34408openalex-snapshot

The MR-Base platform supports systematic causal inference across the human phenome

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Insulin‐like growth factor‐1 and site‐specific cancers: A Mendelian randomization study

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Genome‐wide association analysis of serum alanine and aspartate aminotransferase, and the modifying effects of BMI in 388k European individuals

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Statistical learning for sparser fine‐mapped polygenic models: The prediction of LDL‐cholesterol

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Genetically predicted circulating concentrations of micronutrients and risk of breast cancer: A Mendelian randomization study

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Genetically determined cutaneous nevi and risk of cancer

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Population-based studies reveal an additive role of type IV collagen variants in hematuria and albuminuria

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Causality between diabetes and membranous nephropathy: Mendelian randomization

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Translating genetic association of lipid levels for biological and clinical application

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Role of CaMKII in diabetes induced vascular injury and its interaction with anti-diabetes therapy

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Serum Creatinine Protects Against Amyotrophic Lateral Sclerosis: a Mendelian Randomization Study

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A rare genetic variant in the manganese transporter SLC30A10 and elevated liver enzymes in the general population

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Circulating Insulin-Like Growth Factor 1 Levels and Migraine Risk: A Mendelian Randomization Study

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Disentangling selection on genetically correlated polygenic traits via whole-genome genealogies

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Large-scale machine-learning-based phenotyping significantly improves genomic discovery for optic nerve head morphology

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Enrichment analyses identify shared associations for 25 quantitative traits in over 600,000 individuals from seven diverse ancestries

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Role of X chromosome and dosage-compensation mechanisms in complex trait genetics

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A MicroRNA Linking Human Positive Selection and Metabolic Disorders

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Habitual coffee intake and plasma lipid profile: Evidence from UK Biobank

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Education, biological ageing, all-cause and cause-specific mortality and morbidity: UK biobank cohort study

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The Heritability of Kidney Function Using an Older Australian Twin Population

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Associations and limited shared genetic aetiology between bipolar disorder and cardiometabolic traits in the UK Biobank

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Analyses of biomarker traits in diverse UK biobank participants identify associations missed by European-centric analysis strategies

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Evidence for a causal association between milk intake and cardiometabolic disease outcomes using a two-sample Mendelian Randomization analysis in up to 1,904,220 individuals

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Clonal myelopoiesis promotes adverse outcomes in chronic kidney disease

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Genome-wide association study implicates lipid pathway dysfunction in antipsychotic-induced weight gain: multi-ancestry validation

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Oxytocin receptor expression patterns in the human brain across development

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Psychosocial moderators of polygenic risk scores of inflammatory biomarkers in relation to GrimAge

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Unraveling folate deficiency: prevalence, biochemical associations, genetic determinants, and strategies for adolescent health in North India

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Sex-specific genetic effects across biomarkers

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An expanded analysis framework for multivariate GWAS connects inflammatory biomarkers to functional variants and disease

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Polygenic risk modeling with latent trait-related genetic components

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Graphical analysis for phenome-wide causal discovery in genotyped population-scale biobanks

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Genetic analysis of over half a million people characterises C-reactive protein loci

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Identifying interpretable gene-biomarker associations with functionally informed kernel-based tests in 190,000 exomes

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Fast kernel-based association testing of non-linear genetic effects for biobank-scale data

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Nanoparticle enrichment mass-spectrometry proteomics identifies protein-altering variants for precise pQTL mapping

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A polygenic score method boosted by non-additive models

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Genetic architecture of routinely acquired blood tests in a British South Asian cohort

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Large-scale multi-omics analyses in Hispanic/Latino populations identify genes for cardiometabolic traits

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Rare variant contribution to human disease in 281,104 UK Biobank exomes

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The sequences of 150,119 genomes in the UK Biobank

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Inhibiting membrane rupture with NINJ1 antibodies limits tissue injury

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Genome-wide characterization of circulating metabolic biomarkers

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Whole-exome imputation within UK Biobank powers rare coding variant association and fine-mapping analyses

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Challenges and future directions for studying effects of host genetics on the gut microbiome

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Novel genetic loci associated with osteoarthritis in multi-ancestry analyses in the Million Veteran Program and UK Biobank

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Genetic studies of paired metabolomes reveal enzymatic and transport processes at the interface of plasma and urine

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Multi-ancestry genome-wide study identifies effector genes and druggable pathways for coronary artery calcification

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Protein-altering variants at copy number-variable regions influence diverse human phenotypes

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Single-cell eQTL analysis identifies genetic variation underlying metabolic dysfunction-associated steatohepatitis

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Proteomic signatures improve risk prediction for common and rare diseases

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GWAS of allometric body-shape indices in UK Biobank identifies loci suggesting associations with morphogenesis, organogenesis, adrenal cell renewal and cancer

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Gut microbiota composition in colorectal cancer patients is genetically regulated

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Genetics of female and male reproductive traits and their relationship with health, longevity and consequences for offspring

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Genetically predicted circulating concentrations of micronutrients and risk of colorectal cancer among individuals of European descent: a Mendelian randomization study

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Circulating phosphorus concentration and risk of prostate cancer: a Mendelian randomization study

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Fast numerical optimization for genome sequencing data in population biobanks

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High circulating insulin-like growth factor-1 reduces the risk of renal cell carcinoma: a Mendelian randomization study

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Serum bilirubin and kidney function: a Mendelian randomization study

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Altered Blood Cell Traits Underlie a Major Genetic Locus of Severe COVID-19

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A comprehensive evaluation of methods for Mendelian randomization using realistic simulations and an analysis of 38 biomarkers for risk of type 2 diabetes

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The clinical utility of polygenic risk scores for combined hyperlipidemia

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Large-Scale Sparse Regression for Multiple Responses with Applications to UK Biobank

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Genome-wide association studies identify 137 loci for DNA methylation biomarkers of ageing

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Association of complex traits with common genetic variation across genomic regions containing pathogenic copy number variations

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A Comprehensive Evaluation of Methods for Mendelian Randomization Using Realistic Simulations and an Analysis of 38 Biomarkers for Risk of Type-2 Diabetes

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Identification of key variants correlated with susceptibility of primary osteoporosis in the Chinese Han group

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Genetically predicted insulin‐like growth factor‐I in relation to muscle mass and strength

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Genetic Interleukin 6 Signaling Deficiency Attenuates Cardiovascular Risk in Clonal Hematopoiesis

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Proteogenomic Data Integration Reveals CXCL10 as a Potentially Downstream Causal Mediator for IL-6 Signaling on Atherosclerosis

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Additive Effects of Genetic Interleukin‐6 Signaling Downregulation and Low‐Density Lipoprotein Cholesterol Lowering on Cardiovascular Disease: A 2×2 Factorial Mendelian Randomization Analysis

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Circulating bilirubin levels and risk of colorectal cancer: serological and Mendelian randomization analyses

inferred← citeshttps://doi.org/10.1186/s12916-022-02322-3openalex-snapshot

Identifying molecular mediators of the relationship between body mass index and endometrial cancer risk: a Mendelian randomization analysis

inferred← citeshttps://doi.org/10.1186/s12916-022-02446-6openalex-snapshot

Associations of genetically predicted IL-6 signaling with cardiovascular disease risk across population subgroups

inferred← citeshttps://doi.org/10.1186/s13059-021-02398-9openalex-snapshot

Genome-wide association studies identify 137 genetic loci for DNA methylation biomarkers of aging

inferred← citeshttps://doi.org/10.1214/21-aoas1575openalex-snapshot

Large-scale multivariate sparse regression with applications to UK Biobank

inferred← citeshttps://doi.org/10.1371/journal.pgen.1010624openalex-snapshot

PRSet: Pathway-based polygenic risk score analyses and software

inferred← citeshttps://doi.org/10.1371/journal.pmed.1003859openalex-snapshot

The relationship between lipoprotein A and other lipids with prostate cancer risk: A multivariable Mendelian randomisation study

inferred← citeshttps://doi.org/10.14715/cmb/2023.69.10.22openalex-snapshot

Mendelian randomization study of IGF-1, childhood obesity and obesity-related asthma

inferred← citeshttps://doi.org/10.21037/atm-22-1156openalex-snapshot

Causal effects of serum sex hormone binding protein levels on the risk of amyotrophic lateral sclerosis: a mendelian randomization study

inferred← citeshttps://doi.org/10.21203/rs.3.rs-6802545/v1openalex-snapshot

Genetic risk for Alzheimer’s disease, and differential trajectories in circulating blood biomarkers in UK Biobank (n=17,817)

inferred← citeshttps://doi.org/10.2215/cjn.00020120openalex-snapshot

Genome-Wide Association Studies of CKD and Related Traits

inferred← citeshttps://doi.org/10.3233/jad-200338openalex-snapshot

Alzheimer’s Disease Susceptibility Gene Apolipoprotein E (APOE) and Blood Biomarkers in UK Biobank (N = 395,769)

inferred← citeshttps://doi.org/10.3410/f.739171135.793581883openalex-snapshot

Faculty Opinions recommendation of Education, biological ageing, all-cause and cause-specific mortality and morbidity: UK biobank cohort study.

inferred← citeshttps://doi.org/10.5114/ada.2023.127642openalex-snapshot

Association of the HLA-G rs66554220 variant with non-segmental vitiligo and its clinical features in Northwestern Mexico population

inferred← citeshttps://doi.org/10.5204/thesis.eprints.244665openalex-snapshot

Characterizing the genetic architecture of chronic kidney disease

inferred← citeshttps://doi.org/10.7150/jca.103669openalex-snapshot

Investigating causal relationships of blood and urine biomarkers with urological cancer risks: a mendelian randomization study and colocalization analyses

inferred← citeshttps://doi.org/10.7554/elife.58376openalex-snapshot

Lymphangiogenic therapy prevents cardiac dysfunction by ameliorating inflammation and hypertension

inferred← citeshttps://doi.org/10.7554/elife.58567openalex-snapshot

Investigating pleiotropic effects of statins on ischemic heart disease in the UK Biobank using Mendelian randomisation

inferred← citeshttps://doi.org/10.7554/elife.58615openalex-snapshot

GWAS of three molecular traits highlights core genes and pathways alongside a highly polygenic background

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