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Sponge phylogeny, animal monophyly, and the origin of the nervous system: 18S rRNA evidence

https://doi.org/10.1139/z96-231
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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An analysis of the origin of metazoans, using comparisons of partial sequences of the 28S RNA, reveals an early emergence of triploblasts.
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Cloning of Hsp70 genes from the marine sponges Sycon raphanus (Calcarea) and Rhabdocalyptus dawsoni (Hexactinellida). An approach to solve the phylogeny of sponges
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The 18S ribosomal RNA sequence of the sea anemone Ammonia sulcata and its evolutionary position among other eukaryotes
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[35] Influence of base composition on quantitative estimates of gene evolution
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Small subunit ribosomal RNA gene sequence of the parasitic protozoan Haplosporidium nelsoni provides a molecular probe for the oyster MSX disease
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An analysis of partial 28S ribosomal RNA sequences suggests early radiations of sponges
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The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions
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Short chain collagens in sponges are encoded by a family of closely related genes.
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Septate junctions in the calcareous sponge Sycon ciliatum
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Hobgoblin of phylogenetics?
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The Neutral Theory of Molecular Evolution
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Characterization of a fibrillar collagen gene in sponges reveals the early evolutionary appearance of two collagen gene families.
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18S rRNA data indicate that Aschelminthes are polyphyletic in origin and consist of at least three distinct clades.
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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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A revision of the supraspecific classification of the subclass Calcaronea (Porifera, class Calcarea)
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Life stages and tentative life cycle ofPsorospermium haeckeli, a species of the novel DRIPs clade from the animal-fungal dichotomy
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Antho‐RFamide‐containing neurons in the primitive nervous system of the anthozoan Renilla koellikeri
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Molecular biology of demosponge axial filaments and their roles in biosilicification
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The Identification of MicroRNAs in Calcisponges: Independent Evolution of MicroRNAs in Basal Metazoans
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Cloning of Hsp70 genes from the marine sponges Sycon raphanus (Calcarea) and Rhabdocalyptus dawsoni (Hexactinellida). An approach to solve the phylogeny of sponges
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Receptor Tyrosine Kinase, an Autapomorphic Character of Metazoa: Identification in Marine Sponges
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Phylogenetic Position of the Hexactinellida Within the Phylum Porifera Based on the Amino Acid Sequence of the Protein Kinase C from Rhabdocalyptus dawsoni
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A chemical view of the most ancient metazoa – biomarker chemotaxonomy of hexactinellid sponges
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Phylogenetic Analyses Under Secondary Structure-Specific Substitution Models Outperform Traditional Approaches: Case Studies with Diploblast LSU
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Ultrastructural studies on the development of Enteromyxum scophthalmi (Myxozoa), an enteric parasite of turbot (Scophthalmus maximus L.)
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Tyrosine hydroxylase and dopamine-β-hydroxylase immunoreactivities in the cnidarian Renilla koellikeri
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Evolutionary relationship of Porifera within the eukaryotes
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The fatty acids of calcareous sponges (Calcarea, Porifera)
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The NK Homeobox Gene Cluster Predates the Origin of Hox Genes
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Articulated sponges from the Lower Cambrian Hetang Formation in southern Anhui, South China: their age and implications for the early evolution of sponges
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The Species Problem in Myxomycetes Revisited
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Expansion of the SOX gene family predated the emergence of the Bilateria
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Phylogenetic analysis of freshwater sponges provide evidence for endemism and radiation in ancient lakes
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Polyphyly of the genus Axinella and of the family Axinellidae (Porifera: Demospongiaep)
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Exploring the potential of small RNA subunit and ITS sequences for resolving phylogenetic relationships within the phylum Ctenophora
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Amoeboflagellates and mitochondrial cristae in eukaryote evolution: megasystematics of the new protozoan subkingdoms eozoa and neozoa
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Phylogenetic relationships of the family Axinellidae (Porifera: Demospongiae) using morphological and molecular data
inferred← citeshttps://doi.org/10.1046/j.1463-6409.2000.00044.xopenalex-snapshot
Clypeatula cooperensis gen. n., sp. n., a new freshwater sponge (Porifera, Spongillidae) from the Rocky Mountains of Montana, USA
inferred← citeshttps://doi.org/10.1046/j.1525-142x.2001.003003170.xopenalex-snapshot
Animal phylogeny and the ancestry of bilaterians: inferences from morphology and 18S rDNA gene sequences
inferred← citeshttps://doi.org/10.1046/j.1525-142x.2001.01048.xopenalex-snapshot
Defining phyla: evolutionary pathways to metazoan body plans
inferred← citeshttps://doi.org/10.1073/pnas.0405867102openalex-snapshot
Reconstructing early sponge relationships by using the Burgess Shale fossil Eiffelia globosa , Walcott
inferred← citeshttps://doi.org/10.1073/pnas.0503660102openalex-snapshot
Origin of the Eumetazoa: Testing ecological predictions of molecular clocks against the Proterozoic fossil record
inferred← citeshttps://doi.org/10.1073/pnas.171316998openalex-snapshot
Evaluating hypotheses of basal animal phylogeny using complete sequences of large and small subunit rRNA
inferred← citeshttps://doi.org/10.1073/pnas.94.13.6803openalex-snapshot
Ligand binding was acquired during evolution of nuclear receptors
inferred← citeshttps://doi.org/10.1073/pnas.95.26.15458openalex-snapshot
Evaluating multiple alternative hypotheses for the origin of Bilateria: An analysis of 18S rRNA molecular evidence
inferred← citeshttps://doi.org/10.1073/pnas.97.9.4453openalex-snapshot
The new animal phylogeny: Reliability and implications
inferred← citeshttps://doi.org/10.1078/0944-2006-00128openalex-snapshot
Old trees, new trees – is there any progress?
inferred← citeshttps://doi.org/10.1080/00241160310001263openalex-snapshot
Growth patterns of Lower Palaeozoic sponges
inferred← citeshttps://doi.org/10.1080/00241160310006385openalex-snapshot
Cyathophycus and the origin of demosponges
inferred← citeshttps://doi.org/10.1080/10635150309322openalex-snapshot
Phylogeny and Evolution of Calcareous Sponges: Monophyly of Calcinea and Calcaronea, High Level of Morphological Homoplasy, and the Primitive Nature of Axial Symmetry
inferred← citeshttps://doi.org/10.1080/713834391openalex-snapshot
New species of Calcaronea (Porifera: Calcarea) from cryptic habitats of the southern Great Barrier Reef (Heron Island and Wistari Reef, Capricorn-Bunker Group, Australia)
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.001.0001openalex-snapshot
Animal Evolution
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.002.0003openalex-snapshot
Copyright Page
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.002.0004openalex-snapshot
Foreword
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.002.0007openalex-snapshot
Contributors
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.002.0008openalex-snapshot
Introduction
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0001openalex-snapshot
The earliest fossil record of the animals and its significance
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0002openalex-snapshot
The Ediacaran emergence of bilaterians: congruence between the genetic and the geological fossil records
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0003openalex-snapshot
Genomic, phylogenetic, and cell biological insights into metazoan origins
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0004openalex-snapshot
The mouth, the anus, and the blastopore—open questions about questionable openings
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0005openalex-snapshot
Origins of metazoan body plans: the larval revolution
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0006openalex-snapshot
Assembling the spiralian tree of life
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0007openalex-snapshot
The evolution of nervous system centralization
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0008openalex-snapshot
The origins and evolution of the Ecdysozoa
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0009openalex-snapshot
Deciphering deuterostome phylogeny: molecular, morphological, and palaeontological perspectives
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0010openalex-snapshot
Molecular genetic insights into deuterostome evolution from the direct-developing hemichordateSaccoglossus kowalevskii
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0011openalex-snapshot
Invertebrate Problematica: kinds, causes, and solutions
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0012openalex-snapshot
Improvement of molecular phylogenetic inference and the phylogeny of Bilateria
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0013openalex-snapshot
Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0014openalex-snapshot
The animal in the genome: comparative genomics and evolution
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0015openalex-snapshot
MicroRNAs and metazoan phylogeny: big trees from little genes
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0016openalex-snapshot
The evolution of developmental gene networks: lessons from comparative studies on holometabolous insects
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0017openalex-snapshot
Conserved developmental processes and the evolution of novel traits: wounds, embryos, veins, and butterfly eyespots
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199549429.003.0018openalex-snapshot
Reassembling animal evolution: a four-dimensional puzzle
inferred← citeshttps://doi.org/10.1093/icb/39.3.617openalex-snapshot
The Origin of Bodyplans
inferred← citeshttps://doi.org/10.1093/icb/43.1.19openalex-snapshot
The Significance of Syncytial Tissues for the Position of the Hexactinellida in the Metazoa
inferred← citeshttps://doi.org/10.1093/icb/43.1.28openalex-snapshot
Bridging Morphological Transitions to the Metazoa
inferred← citeshttps://doi.org/10.1093/icb/43.2.281openalex-snapshot
Origin of the Metazoan Immune System: Identification of the Molecules and Their Functions in Sponges
inferred← citeshttps://doi.org/10.1093/icb/45.2.333openalex-snapshot
Sponges: New Views of Old Animals
inferred← citeshttps://doi.org/10.1093/icb/45.2.335openalex-snapshot
Sponge Development and Antiquity of Animal Pattern Formation
inferred← citeshttps://doi.org/10.1093/icb/45.4.585openalex-snapshot
Phylogenetic Context and Basal Metazoan Model Systems
inferred← citeshttps://doi.org/10.1093/molbev/msg018openalex-snapshot
Placozoa Are Not Derived Cnidarians: Evidence from Molecular Morphology
inferred← citeshttps://doi.org/10.1093/molbev/msn047openalex-snapshot
Genesis and Expansion of Metazoan Transcription Factor Gene Classes
inferred← citeshttps://doi.org/10.1093/molbev/msp148openalex-snapshot
Phylogenetic-Signal Dissection of Nuclear Housekeeping Genes Supports the Paraphyly of Sponges and the Monophyly of Eumetazoa
inferred← citeshttps://doi.org/10.1093/molbev/mss274openalex-snapshot
Mitochondrial DNA of Clathrina clathrus (Calcarea, Calcinea): Six Linear Chromosomes, Fragmented rRNAs, tRNA Editing, and a Novel Genetic Code
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a025742openalex-snapshot
Early evolution of metazoan serine/threonine and tyrosine kinases: identification of selected kinases in marine sponges
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a025968openalex-snapshot
Phylogenetic analysis of the Hsp70 sequences reveals the monophyly of Metazoa and specific phylogenetic relationships between animals and fungi
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a026124openalex-snapshot
A new perspective on lower metazoan relationships from 18S rDNA sequences
inferred← citeshttps://doi.org/10.1098/rspb.1999.0605openalex-snapshot
Evolutionary relationships of Metazoa within the eukaryotes based on molecular data from Porifera
inferred← citeshttps://doi.org/10.1098/rspb.2000.0991openalex-snapshot
Monophyly of brachiopods and phoronids: reconciliation of molecular evidence with Linnaean classification (the subphylum Phoroniformea nov.)
inferred← citeshttps://doi.org/10.1098/rstb.2006.1842openalex-snapshot
Cell evolution and Earth history: stasis and revolution
inferred← citeshttps://doi.org/10.1098/rstb.2007.2232openalex-snapshot
The earliest fossil record of the animals and its significance
inferred← citeshttps://doi.org/10.1098/rstb.2015.0059openalex-snapshot
Where is my mind? How sponges and placozoans may have lost neural cell types
inferred← citeshttps://doi.org/10.1098/rstb.2015.0476openalex-snapshot
Origin of animal multicellularity: precursors, causes, consequences—the choanoflagellate/sponge transition, neurogenesis and the Cambrian explosion
inferred← citeshttps://doi.org/10.1099/00207713-52-2-297openalex-snapshot
The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa.
inferred← citeshttps://doi.org/10.1101/031963openalex-snapshot
A statistical approach to genome size evolution: Observations and explanations
inferred← citeshttps://doi.org/10.1111/j.1096-0031.1998.tb00338.xopenalex-snapshot
Phylogeny of the Metazoa Based on Morphological and 18S Ribosomal DNA Evidence
inferred← citeshttps://doi.org/10.1111/j.1096-0031.2004.00041.xopenalex-snapshot
The phylogenetic position of the comb jellies (Ctenophora) and the importance of taxonomic sampling
inferred← citeshttps://doi.org/10.1111/j.1096-0031.2008.00219.xopenalex-snapshot
Phylum Tardigrada: an “individual” approach
inferred← citeshttps://doi.org/10.1111/j.1439-0469.1999.tb00985.xopenalex-snapshot
The Ecdysozoa: Artifact or monophylum?
inferred← citeshttps://doi.org/10.1111/j.1469-185x.1998.tb00030.xopenalex-snapshot
A revised six‐kingdom system of life
inferred← citeshttps://doi.org/10.1111/j.1525-142x.2007.00200.xopenalex-snapshot
Reproduction in a carnivorous sponge: the significance of the absence of an aquiferous system to the sponge body plan
inferred← citeshttps://doi.org/10.1111/j.1525-142x.2010.00404.xopenalex-snapshot
A placozoan affinity for Dickinsonia and the evolution of late Proterozoic metazoan feeding modes
inferred← citeshttps://doi.org/10.1111/j.1744-7410.2002.tb00058.xopenalex-snapshot
Embryogenesis and metamorphosis in a haplosclerid demosponge: gastrulation and transdifferentiation of larval ciliated cells to choanocytes
inferred← citeshttps://doi.org/10.1111/j.1744-7410.2004.tb00138.xopenalex-snapshot
Choanoflagellates, choanocytes, and animal multicellularity
inferred← citeshttps://doi.org/10.1111/jfd.12418openalex-snapshot
Cutaneous myxidiosis in European eel, Anguilla anguilla (Linnaeus, 1758): histopathology, histochemistry and laminin immunohistochemistry
inferred← citeshttps://doi.org/10.1111/zsc.12208openalex-snapshot
Monophyly of Anthozoa (Cnidaria): why do nuclear and mitochondrial phylogenies disagree?
inferred← citeshttps://doi.org/10.1134/s1063074013040044openalex-snapshot
Spicules of hexactinellid sponges (Hexactinellida: Porifera) as natural composite materials
inferred← citeshttps://doi.org/10.1134/s2079086417010029openalex-snapshot
Gastrulation in Cnidaria: The key to an understanding of phylogeny or the chaos of secondary modifications?
inferred← citeshttps://doi.org/10.1139/z05-170openalex-snapshot
Embryogenesis and larval differentiation in sponges
inferred← citeshttps://doi.org/10.1139/z06-005openalex-snapshot
Phylogeny and evolution of calcareous sponges
inferred← citeshttps://doi.org/10.1139/z06-032openalex-snapshot
Mineral skeletogenesis in sponges
inferred← citeshttps://doi.org/10.1144/sp286.25openalex-snapshot
Poriferan paraphyly and its implications for Precambrian palaeobiology
inferred← citeshttps://doi.org/10.1146/annurev-genet-111212-133456openalex-snapshot
The Genomic and Cellular Foundations of Animal Origins
inferred← citeshttps://doi.org/10.1146/annurev.ecolsys.35.112202.130124openalex-snapshot
The New View of Animal Phylogeny
inferred← citeshttps://doi.org/10.11606/t.41.2012.tde-16072012-151403openalex-snapshot
Ceriantharia: a retomada de um clado esquecido
inferred← citeshttps://doi.org/10.11646/zootaxa.1668.1.10openalex-snapshot
On the molecular phylogeny of sponges (Porifera)*
inferred← citeshttps://doi.org/10.11646/zootaxa.1668.1.11openalex-snapshot
The phylum Cnidaria: A review of phylogenetic patterns and diversity 300 years after Linnaeus*
inferred← citeshttps://doi.org/10.1186/1471-2148-13-5openalex-snapshot
Cnidarian phylogenetic relationships as revealed by mitogenomics
inferred← citeshttps://doi.org/10.1186/1471-2148-7-33openalex-snapshot
Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics
inferred← citeshttps://doi.org/10.1201/9780203508930.ch5openalex-snapshot
Origin and Evolution of Animals, Fungi and Their Unicellular Allies (Opisthokonta)
inferred← citeshttps://doi.org/10.1242/dev.126.5.851openalex-snapshot
Fossils, molecules and embryos: new perspectives on the Cambrian explosion
inferred← citeshttps://doi.org/10.1371/journal.pone.0000506openalex-snapshot
A Post-Synaptic Scaffold at the Origin of the Animal Kingdom
inferred← citeshttps://doi.org/10.1371/journal.pone.0001031openalex-snapshot
Wnt and TGF-β Expression in the Sponge Amphimedon queenslandica and the Origin of Metazoan Embryonic Patterning
inferred← citeshttps://doi.org/10.1371/journal.pone.0054576openalex-snapshot
Agent of Whirling Disease Meets Orphan Worm: Phylogenomic Analyses Firmly Place Myxozoa in Cnidaria
inferred← citeshttps://doi.org/10.14411/fp.2001.013openalex-snapshot
The interrelationships of metazoan parasites: a review of phylum- and higher-level hypotheses from recent morphological and molecular phylogenetic analyses
inferred← citeshttps://doi.org/10.1515/bchm.1998.379.10.1243openalex-snapshot
Origin of the Metazoan Bodyplan: Characterization and Functional Testing of the Promoter of the Homeobox Gene EmH-3 from the Freshwater Sponge Ephydatia muelleri in Mouse 3T3 Cells
inferred← citeshttps://doi.org/10.1645/14-671.1openalex-snapshot
The Road To Cnidaria: History of Phylogeny of the Myxozoa
inferred← citeshttps://doi.org/10.1651/0278-0372(2002)022[0217:tstnat]2.0.co;2openalex-snapshot
THE SCUTOCOXIFERA TAX. NOV. AND THE INFORMATION CONTENT OF NUCLEAR SSU RDNA SEQUENCES FOR RECONSTRUCTION OF ISOPOD PHYLOGENY (PERACARIDA: ISOPODA)
inferred← citeshttps://doi.org/10.1666/0094-8373(2005)031[0036:tamoea]2.0.co;2openalex-snapshot
Tempo and mode of early animal evolution: inferences from rocks, Hox, and molecular clocks
inferred← citeshttps://doi.org/10.18756/edn.81.40openalex-snapshot
Zur Evolution der organismischen Autonomie. Teil 1: Begriffsbestimmung und das Beispiel der Entstehung der Metazoen
inferred← citeshttps://doi.org/10.18756/edn.82.107openalex-snapshot
Zur Evolution der organismischen Autonomie. Teil 2: Vergleich einiger ursprünglicher Metazoen und Diskussion
inferred← citeshttps://doi.org/10.2307/1542615openalex-snapshot
Origin of Insulin Receptor-Like Tyrosine Kinases in Marine Sponges
inferred← citeshttps://doi.org/10.2307/25470664openalex-snapshot
Does the High Gene Density in the Sponge NK Homeobox Gene Cluster Reflect Limited Regulatory Capacity?
inferred← citeshttps://doi.org/10.3897/zookeys.786.27546openalex-snapshot
Unravelling the moons: review of the genera Paratetilla and Cinachyrella in the Indo-Pacific (Demospongiae, Tetractinellida, Tetillidae)
inferred← citeshttps://doi.org/10.3897/zookeys.791.27546openalex-snapshot
Unravelling the moons: review of the genera Paratetilla and Cinachyrella in the Indo-Pacific (Demospongiae, Tetractinellida, Tetillidae)
inferred← citeshttps://doi.org/10.47749/t/unicamp.2017.1082777openalex-snapshot
Sistemática e distribuição de mixosporídeos (Cnidaria: Myxozoa) parasitos de tucunaré (Cichla spp.) e dourada (Brachyplatystoma rousseauxii) na Bacia Amazônica
inferred← citeshttps://doi.org/10.48550/arxiv.1807.01828openalex-snapshot
Observations and perspectives on the variation of biodiversity
inferred← citeshttps://doi.org/10.5281/zenodo.180149openalex-snapshot
The phylum Cnidaria: A review of phylogenetic patterns and diversity 300 years after Linnaeus *
inferred← citeshttps://doi.org/10.53846/goediss-3219openalex-snapshot
The quest for orthologs, the tree of basal animals, and taxonomic profiles of metagenomes
inferred← citeshttps://doi.org/10.5455/jeim.301111.or.018openalex-snapshot
Protein mapping by combined 2-D electrophoresis and mass spectrometry: an approach to identify the proteome changes in muscle of diabetic rats and treatment with Cynodon dactylon L
inferred← citeshttps://doi.org/10.70675/0dfa72d0z1817z40f6z86f9zc4e836034863openalex-snapshot
Etude de gène et voie de signalisation impliqués dans les processus morphogénétiques chez Oscarella lobularis : implications potentielles sur la compréhension de l'origine du système nerveux
inferred← citeshttps://doi.org/10.70675/20073443z7688z4e8azb2e5z0c9d31eaf64bopenalex-snapshot
Spongiaires Irciniidae de Méditerranée : chimiotaxonomie, métabolites volatils et bio-indicateurs de pollution par les éléments traces métalliques
inferred← citeshttps://doi.org/10.70675/29fb5e58z95e7z4353z8498zaa306e8a2449openalex-snapshot
L’origine des morphogenèses épithéliales et leurs implications concernant l’évolution précoce des métazoaires
inferred← citeshttps://doi.org/10.70675/2f48e6ddza822z455eza9d5zf10fc679949copenalex-snapshot
Le défi évolutif du changement climatique, processus adaptatifs chez le corail rouge (Corallium rubrum)
inferred← citeshttps://doi.org/10.70675/341d37d1z90c5z4da7z8f7az77049c4699f4openalex-snapshot
Molecular insight into ion transport for calcification in symbiotic and non-symbiotic corals
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