On the public citation graph

Coalescent Simulations Reveal Hybridization and Incomplete Lineage Sorting in Mediterranean Linaria

https://doi.org/10.1371/journal.pone.0039089
0 signed · 213 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/fedr.19430520103openalex-snapshot
Zur Gliederung der Antirrhineae
inferredcites →https://doi.org/10.1002/tax.591009openalex-snapshot
The Afro‐Madagascan genus Warneckea (Melastomataceae): Molecular systematics and revised infrageneric classification
inferredcites →https://doi.org/10.1002/tax.591012openalex-snapshot
Molecular phylogeny of tribe Schismatoglottideae (Araceae) based on two plastid markers and recognition of a new tribe, Philonotieae, from the neotropics
inferredcites →https://doi.org/10.1002/tax.592012openalex-snapshot
Geographical speciation related to Pleistocene range shifts in the western Mediterranean mountains ( Reseda sect. Glaucoreseda , Resedaceae)
inferredcites →https://doi.org/10.1002/tax.593011openalex-snapshot
A molecular phylogeny, morphology and classification of genera of Ranunculeae (Ranunculaceae)
inferredcites →https://doi.org/10.1002/tax.595005openalex-snapshot
Homoploid hybrid speciation in action
inferredcites →https://doi.org/10.1002/tax.595010openalex-snapshot
A molecular phylogeny and a revised classification of the Mediterranean genus Anthemis s.l. (Compositae, Anthemideae) based on three molecular markers and micromorphological characters
inferredcites →https://doi.org/10.1002/tax.596004openalex-snapshot
A molecular phylogeny and a new classification of Pyrola (Pyroleae, Ericaceae)
inferredcites →https://doi.org/10.1002/tax.602007openalex-snapshot
Southern European glacial refugia: A tale of tales
inferredcites →https://doi.org/10.1002/tax.603007openalex-snapshot
Molecular phylogeny of Euphorbia subg. Esula sect. Aphyllis (Euphorbiaceae) inferred from nrDNA and cpDNA markers with biogeographic insights
inferredcites →https://doi.org/10.1002/tax.605003openalex-snapshot
Redefinition of Adiantopsis Fée (Pteridaceae): Systematics, diversification, and biogeography
inferredcites →https://doi.org/10.1006/viro.1999.0056openalex-snapshot
Possible Emergence of New Geminiviruses by Frequent Recombination
inferredcites →https://doi.org/10.1007/1-4020-4904-8openalex-snapshot
Phylogeography of southern European refugia : evolutionary perspectives on the origins and conservation of European biodiversity
inferredcites →https://doi.org/10.1007/1-4020-4904-8_5openalex-snapshot
Refugia within Refugia: Patterns of Phylogeographic Concordance in the Iberian Peninsula
inferredcites →https://doi.org/10.1007/978-1-4615-5419-6_10openalex-snapshot
Phylogenetic Incongruence: Window into Genome History and Molecular Evolution
inferredcites →https://doi.org/10.1007/bf00182389openalex-snapshot
Analyzing the mosaic structure of genes
inferredcites →https://doi.org/10.1007/s00606-004-0216-1openalex-snapshot
Molecular evidence for naturalness of genera in the tribe Antirrhineae (Scrophulariaceae) and three independent evolutionary lineages from the New World and the Old
inferredcites →https://doi.org/10.1007/s10709-011-9547-3openalex-snapshot
Quaternary phylogeography: the roots of hybrid zones
inferredcites →https://doi.org/10.1016/b978-0-12-372180-8.50042-1openalex-snapshot
AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS
inferredcites →https://doi.org/10.1016/j.jtbi.2008.04.005openalex-snapshot
The conditioned reconstructed process
inferredcites →https://doi.org/10.1016/j.revpalbo.2010.02.015openalex-snapshot
Patterns of extinction and persistence of Arctotertiary flora in Iberia during the Quaternary
inferredcites →https://doi.org/10.1016/j.tree.2004.01.003openalex-snapshot
Hybridization and adaptive radiation
inferredcites →https://doi.org/10.1016/j.tree.2009.01.009openalex-snapshot
Gene tree discordance, phylogenetic inference and the multispecies coalescent
inferredcites →https://doi.org/10.1016/j.ympev.2005.11.016openalex-snapshot
The impact of intragenic recombination on phylogenetic reconstruction at the sectional level in Eucalyptus when using a single copy nuclear gene (cinnamoyl CoA reductase)
inferredcites →https://doi.org/10.1016/j.ympev.2007.12.008openalex-snapshot
Dealing with incongruence in the quest for the species tree: A case study from the orchid genus Satyrium
inferredcites →https://doi.org/10.1016/j.ympev.2009.05.033openalex-snapshot
Coalescent methods for estimating phylogenetic trees
inferredcites →https://doi.org/10.1016/j.ympev.2011.02.019openalex-snapshot
Estimating species trees using approximate Bayesian computation
inferredcites →https://doi.org/10.1038/23231openalex-snapshot
Chronology, causes and progression of the Messinian salinity crisis
inferredcites →https://doi.org/10.1038/267399a0openalex-snapshot
History of the Mediterranean salinity crisis
inferredcites →https://doi.org/10.1038/307429a0openalex-snapshot
Origin and evolution of the Mediterranean vegetation and climate in Europe
inferredcites →https://doi.org/10.1038/35016000openalex-snapshot
The genetic legacy of the Quaternary ice ages
inferredcites →https://doi.org/10.1038/nature05706openalex-snapshot
Hybrid speciation
inferredcites →https://doi.org/10.1038/nature08555openalex-snapshot
Catastrophic flood of the Mediterranean after the Messinian salinity crisis
inferredcites →https://doi.org/10.1038/nature10231openalex-snapshot
Inference of human population history from individual whole-genome sequences
inferredcites →https://doi.org/10.1038/nrg795openalex-snapshot
Genealogical trees, coalescent theory and the analysis of genetic polymorphisms
inferredcites →https://doi.org/10.1046/j.1365-2540.2000.00680.xopenalex-snapshot
The likelihood of homoploid hybrid speciation
inferredcites →https://doi.org/10.1046/j.1365-313x.2001.00961.xopenalex-snapshot
Peroxisomal alanine : glyoxylate aminotransferase (AGT1) is a photorespiratory enzyme with multiple substrates in Arabidopsis thaliana
inferredcites →https://doi.org/10.1073/pnas.0607004104openalex-snapshot
High-resolution species trees without concatenation
inferredcites →https://doi.org/10.1073/pnas.241370698openalex-snapshot
Evaluation of methods for detecting recombination from DNA sequences: Computer simulations
inferredcites →https://doi.org/10.1073/pnas.84.24.9054openalex-snapshot
Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs.
inferredcites →https://doi.org/10.1080/00087114.1978.10796761openalex-snapshot
Croisements Experimentaux Interspecifiques au Sein du GenreLinaria
inferredcites →https://doi.org/10.1080/01621459.1995.10476572openalex-snapshot
Bayes Factors
inferredcites →https://doi.org/10.1080/10635150590945359openalex-snapshot
Placing Paleopolyploidy in Relation to Taxon Divergence: A Phylogenetic Analysis in Legumes Using 39 Gene Families
inferredcites →https://doi.org/10.1080/10635150600697283openalex-snapshot
Differentiating between Hypotheses of Lineage Sorting and Introgression in New Zealand Alpine Cicadas (Maoricicada Dugdale)
inferredcites →https://doi.org/10.1080/10635150601146041openalex-snapshot
Inconsistency of Phylogenetic Estimates from Concatenated Data under Coalescence
inferredcites →https://doi.org/10.1080/10635150701405560openalex-snapshot
Estimating Species Phylogeny from Gene-Tree Probabilities Despite Incomplete Lineage Sorting: An Example from Melanoplus Grasshoppers
inferredcites →https://doi.org/10.1080/10635150802044011openalex-snapshot
Multilocus Phylogenetics of a Rapid Radiation in the Genus Thomomys (Rodentia: Geomyidae)
inferredcites →https://doi.org/10.1080/10635150802172168openalex-snapshot
The Reticulate History of Medicago (Fabaceae)
inferredcites →https://doi.org/10.1086/600082openalex-snapshot
A Statistical Approach for Distinguishing Hybridization and Incomplete Lineage Sorting
inferredcites →https://doi.org/10.1089/aid.2005.21.98openalex-snapshot
A Modified Bootscan Algorithm for Automated Identification of Recombinant Sequences and Recombination Breakpoints
inferredcites →https://doi.org/10.1093/aob/mcq184openalex-snapshot
The uneven phylogeny and biogeography of Erodium (Geraniaceae): radiations in the Mediterranean and recent recurrent intercontinental colonization
inferredcites →https://doi.org/10.1093/aob/mcq207openalex-snapshot
Molecular phylogenetics of subfamily Ornithogaloideae (Hyacinthaceae) based on nuclear and plastid DNA regions, including a new taxonomic arrangement
inferredcites →https://doi.org/10.1093/bib/bbn013openalex-snapshot
Recent developments in the MAFFT multiple sequence alignment program
inferredcites →https://doi.org/10.1093/bioinformatics/16.6.562openalex-snapshot
RDP: detection of recombination amongst aligned sequences
inferredcites →https://doi.org/10.1093/bioinformatics/16.7.573openalex-snapshot
Sister-Scanning: a Monte Carlo procedure for assessing signals in recombinant sequences
inferredcites →https://doi.org/10.1093/bioinformatics/17.12.1246openalex-snapshot
CONSEL: for assessing the confidence of phylogenetic tree selection
inferredcites →https://doi.org/10.1093/bioinformatics/19.2.301openalex-snapshot
r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
inferredcites →https://doi.org/10.1093/molbev/msg065openalex-snapshot
Rate Variation Among Nuclear Genes and the Age of Polyploidy in Gossypium
inferredcites →https://doi.org/10.1093/molbev/msl018openalex-snapshot
A Chloroplast Genealogy of Hordeum (Poaceae): Long-Term Persisting Haplotypes, Incomplete Lineage Sorting, Regional Extinction, and the Consequences for Phylogenetic Inference
inferredcites →https://doi.org/10.1093/molbev/msl170openalex-snapshot
Bayesian Estimation of Concordance among Gene Trees
inferredcites →https://doi.org/10.1093/molbev/msn083openalex-snapshot
jModelTest: Phylogenetic Model Averaging
inferredcites →https://doi.org/10.1093/molbev/msp274openalex-snapshot
Bayesian Inference of Species Trees from Multilocus Data
inferredcites →https://doi.org/10.1093/molbev/msq079openalex-snapshot
Genome Wide Analyses Reveal Little Evidence for Adaptive Evolution in Many Plant Species
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003872openalex-snapshot
Bayesian Selection of Continuous-Time Markov Chain Evolutionary Models
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026201openalex-snapshot
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040517openalex-snapshot
Relationships between gene trees and species trees.
inferredcites →https://doi.org/10.1093/sysbio/46.3.523openalex-snapshot
Gene Trees in Species Trees
inferredcites →https://doi.org/10.1093/sysbio/syp030openalex-snapshot
Hybrid Origins and Homoploid Reticulate Evolution within Heliosperma (Sileneae, Caryophyllaceae)—A Multigene Phylogenetic Approach with Relative Dating
inferredcites →https://doi.org/10.1093/sysbio/syp031openalex-snapshot
Estimating Species Phylogenies Using Coalescence Times among Sequences
inferredcites →https://doi.org/10.1093/sysbio/syp068openalex-snapshot
Reticulation, Data Combination, and Inferring Evolutionary History: An Example from Danthonioideae (Poaceae)
inferredcites →https://doi.org/10.1093/sysbio/syp076openalex-snapshot
Unifying Vertical and Nonvertical Evolution: A Stochastic ARG-based Framework
inferredcites →https://doi.org/10.1093/sysbio/syq010openalex-snapshot
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
inferredcites →https://doi.org/10.1093/sysbio/syq084openalex-snapshot
Coalescent Histories on Phylogenetic Networks and Detection of Hybridization Despite Incomplete Lineage Sorting
inferredcites →https://doi.org/10.1098/rspb.2009.2163openalex-snapshot
Unparalleled rates of species diversification in Europe
inferredcites →https://doi.org/10.1098/rstb.2003.1388openalex-snapshot
Genetic consequences of climatic oscillations in the Quaternary
inferredcites →https://doi.org/10.1111/j.0014-3820.2001.tb01312.xopenalex-snapshot
MOLECULAR PHYLOGEOGRAPHY, RETICULATION, AND LINEAGE SORTING IN MEDITERRANEAN SENECIO SECT. SENECIO (ASTERACEAE)
inferredcites →https://doi.org/10.1111/j.1095-8312.1999.tb01160.xopenalex-snapshot
Post-glacial re-colonization of European biota
inferredcites →https://doi.org/10.1111/j.1095-8339.2005.00404.xopenalex-snapshot
A taxonomic revision of the Linaria verticillata group (Antirrhineae, Scrophulariaceae)
inferredcites →https://doi.org/10.1111/j.1365-2699.2008.02059.xopenalex-snapshot
A geographical pattern of Antirrhinum (Scrophulariaceae) speciation since the Pliocene based on plastid and nuclear DNA polymorphisms
inferredcites →https://doi.org/10.1111/j.1365-313x.2011.04563.xopenalex-snapshot
The evolutionary history of Antirrhinum suggests that ancestral phenotype combinations survived repeated hybridizations
inferredcites →https://doi.org/10.1111/j.1558-5646.2007.00149.xopenalex-snapshot
NUCLEAR LOCI AND COALESCENT METHODS SUPPORT ANCIENT HYBRIDIZATION AS CAUSE OF MITOCHONDRIAL PARAPHYLY BETWEEN GADWALL AND FALCATED DUCK (ANASSPP.)
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00414.xopenalex-snapshot
ESTIMATING SPECIES TREES USING MULTIPLE-ALLELE DNA SEQUENCE DATA
inferredcites →https://doi.org/10.1111/j.1755-0998.2010.02847.xopenalex-snapshot
Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
inferredcites →https://doi.org/10.1111/j.1755-0998.2011.03070.xopenalex-snapshot
Use of allele‐specific sequencing primers is an efficient alternative to PCR subcloning of low‐copy nuclear genes
inferredcites →https://doi.org/10.1128/jvi.01100-06openalex-snapshot
Recombination Patterns in Aphthoviruses Mirror Those Found in Other Picornaviruses
inferredcites →https://doi.org/10.1186/1471-2148-6-36openalex-snapshot
A survey of nuclear ribosomal internal transcribed spacer substitution rates across angiosperms: an approximate molecular clock with life history effects.
inferredcites →https://doi.org/10.1186/1471-2148-7-214openalex-snapshot
BEAST: Bayesian evolutionary analysis by sampling trees
inferredcites →https://doi.org/10.1186/1471-2148-8-202openalex-snapshot
Using supernetworks to distinguish hybridization from lineage-sorting
inferredcites →https://doi.org/10.1186/1471-2148-8-289openalex-snapshot
Bayesian inference of population size history from multiple loci
inferredcites →https://doi.org/10.1186/1479-7364-1-1-7openalex-snapshot
Gametic phase estimation over large genomic regions using an adaptive window approach
inferredcites →https://doi.org/10.1371/journal.pone.0006362openalex-snapshot
Adaptive Radiation in Mediterranean Cistus (Cistaceae)
inferredcites →https://doi.org/10.1371/journal.pone.0022234openalex-snapshot
Historical Isolation versus Recent Long-Distance Connections between Europe and Africa in Bifid Toadflaxes (Linaria sect. Versicolores)
inferredcites →https://doi.org/10.1534/genetics.106.068874openalex-snapshot
An Exact Nonparametric Method for Inferring Mosaic Structure in Sequence Triplets
inferredcites →https://doi.org/10.1600/036364406775971787openalex-snapshot
Phylogenetic Relationships and Biogeography within the Eurasian Clade of Amaryllidaceae Based on Plastid ndhF and nrDNA ITS Sequences: Lineage Sorting in a Reticulate Area?
inferredcites →https://doi.org/10.1600/036364410x539952openalex-snapshot
Molecular Phylogeny of the Genus Ptilostemon (Compositae: Cardueae) and its Relationships with Cynara and Lamyropsis
inferredcites →https://doi.org/10.2307/2419070openalex-snapshot
Gene Trees and Species Trees: Molecular Systematics as One-Character Taxonomy
inferredcites →https://doi.org/10.2307/25065479openalex-snapshot
Phylogenetic patterns and polyploid evolution within the Mediterranean genus Centaurium (Gentianaceae ‐ Chironieae)
inferredcites →https://doi.org/10.2307/25065483openalex-snapshot
Contrasting nuclear‐plastidial phylogenetic patterns in the recently diverged Iberian Phlomis crinita and P. lychnitis lineages (Lamiaceae)
inferredcites →https://doi.org/10.2307/25065579openalex-snapshot
Phylogenetic and phylogeographic analysis of the western Mediterranean Arenaria section Plinthine (Caryophyllaceae) based on nuclear, plastid, and morphological markers
inferredcites →https://doi.org/10.2307/4115711openalex-snapshot
A Revision of the Tribe Antirrhineae
inferredcites →https://doi.org/10.2307/4135441openalex-snapshot
Phylogeny and systematics of Achillea (AsteraceaeAnthemideae) inferred from nrITS and plastid trnLF DNA sequences
inferredcites →https://doi.org/10.3732/ajb.0900192openalex-snapshot
Molecular systematics of the neotropical genus Psiguria (Cucurbitaceae): Implications for phylogeny and species identification
inferredcites →https://doi.org/10.3732/ajb.0900346openalex-snapshot
The age and diversification of the angiosperms re‐revisited
inferredcites →https://doi.org/10.3732/ajb.94.3.275openalex-snapshot
Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III
inferredcites →https://doi.org/10.5962/bhl.title.11986openalex-snapshot
Flore de France; ou, Description des plantes qui croissent spontanément en France, en Corse et en Alsace-Lorraine
inferredcites →https://doi.org/10.5962/bhl.title.59234openalex-snapshot
Monographie des antirrhinées

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/phytotaxa.270.4.2zenodo-depositor-declared
Largely invariant trnL-F/nrITS sequences and ISSRs do not resolve morphospecies of Warburgia (Canellaceae)
inferred← citeshttps://doi.org/10.11646/phytotaxa.343.2.3zenodo-depositor-declared
Linaria argillicola (Plantaginaceae), a new species of L. sect. Supinae from the southern Iberian Peninsula
inferred← citeshttps://doi.org/10.11646/phytotaxa.530.2.3zenodo-depositor-declared
Linaria subbaetica (Plantaginaceae), a new species from the south of the Iberian Peninsula
inferred← citeshttps://doi.org/10.11646/phytotaxa.585.1.1zenodo-depositor-declared
Linaria pseudamethystea (Antirrhineae, Plantaginaceae), a new species mimetic of and apparently sympatric with L. amethystea
inferred← citeshttps://doi.org/10.1002/ajb2.1251openalex-snapshot
Being in the right place at the right time? Parallel diversification bursts favored by the persistence of ancient epizoochorous traits and hidden factors in Cynoglossoideae
inferred← citeshttps://doi.org/10.1002/ajb2.16155openalex-snapshot
Strong conservatism of floral morphology during the rapid diversification of the genus Helianthemum
inferred← citeshttps://doi.org/10.1002/ece3.9728openalex-snapshot
Phylogeny of Saxifraga section Saxifraga subsection Arachnoideae (Saxifragaceae) and the origin of low elevation shade‐dwelling species
inferred← citeshttps://doi.org/10.1007/82_2018_80openalex-snapshot
Agrobacterium-Mediated Transformation in the Evolution of Plants
inferred← citeshttps://doi.org/10.1007/s00338-016-1482-4openalex-snapshot
Hybridisation among groupers (genus Cephalopholis) at the eastern Indian Ocean suture zone: taxonomic and evolutionary implications
inferred← citeshttps://doi.org/10.1007/s00606-013-0977-5openalex-snapshot
Utility of low-copy nuclear markers in phylogenetic reconstruction of Hypericum L. (Hypericaceae)
inferred← citeshttps://doi.org/10.1007/s00606-014-1161-2openalex-snapshot
Quaternary radiation of bifid toadflaxes (Linaria sect. Versicolores) in the Iberian Peninsula: low taxonomic signal but high geographic structure of plastid DNA lineages
inferred← citeshttps://doi.org/10.1007/s00606-016-1278-6openalex-snapshot
Patterns of phylogenetic incongruence in Medicago found among six loci
inferred← citeshttps://doi.org/10.1007/s00606-017-1461-4openalex-snapshot
Phylogenetic species delimitation unravels a new species in the genus Sclerorhachis (Rech.f.) Rech.f. (Compositae, Anthemideae)
inferred← citeshttps://doi.org/10.1007/s00606-019-01588-0openalex-snapshot
Multi-locus phylogenetic reconstructions reveal ample reticulate relationships among genera in Anthemideae subtribe Handeliinae (Compositae)
inferred← citeshttps://doi.org/10.1007/s10750-016-3044-8openalex-snapshot
Widespread cytonuclear discordance in narrow-leaved cattail (Typha angustifolia) does not explain the dominance of its invasive hybrid (Typha × glauca)
inferred← citeshttps://doi.org/10.1007/s10764-017-0008-4openalex-snapshot
The Hybrid Origin of the Indochinese Gray Langur Trachypithecus crepusculus
inferred← citeshttps://doi.org/10.1007/s11258-015-0539-8openalex-snapshot
Biogeography and evolution of seeder and resprouter forms of Erica coccinea (Ericaceae) in the fire-prone Cape fynbos
inferred← citeshttps://doi.org/10.1007/s13127-016-0316-0openalex-snapshot
Against all odds: reconstructing the evolutionary history of Scrophularia (Scrophulariaceae) despite high levels of incongruence and reticulate evolution
inferred← citeshttps://doi.org/10.1016/j.biocon.2017.05.001openalex-snapshot
Crop wild relative conservation: Wild yams are not that wild
inferred← citeshttps://doi.org/10.1016/j.ppees.2014.05.003openalex-snapshot
Narrow endemics to Mediterranean islands: Moderate genetic diversity but narrow climatic niche of the ancient, critically endangered Naufraga (Apiaceae)
inferred← citeshttps://doi.org/10.1016/j.ppees.2014.07.002openalex-snapshot
Patterns and processes in plant phylogeography in the Mediterranean Basin. A review
inferred← citeshttps://doi.org/10.1016/j.ympev.2013.09.023openalex-snapshot
Diversification of Scrophularia (Scrophulariaceae) in the Western Mediterranean and Macaronesia – Phylogenetic relationships, reticulate evolution and biogeographic patterns
inferred← citeshttps://doi.org/10.1016/j.ympev.2014.02.027openalex-snapshot
Spatio-temporal evolution of Leucophyllum pringlei and allies (Scrophulariaceae): A group endemic to North American xeric regions
inferred← citeshttps://doi.org/10.1016/j.ympev.2014.06.026openalex-snapshot
Genotyping-by-sequencing as a tool to infer phylogeny and ancestral hybridization: A case study in Carex (Cyperaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2014.07.014openalex-snapshot
Mitochondrial DNA capture and divergence in Pinus provide new insights into the evolution of the genus
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.03.023openalex-snapshot
Untangling reticulate evolutionary relationships among New World and Hawaiian mints (Stachydeae, Lamiaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.04.005openalex-snapshot
Testing reticulate versus coalescent origins of Erica lusitanica using a species phylogeny of the northern heathers (Ericeae, Ericaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.06.003openalex-snapshot
Detecting reticulate relationships among diploid Leucanthemum Mill. (Compositae, Anthemideae) taxa using multilocus species tree reconstruction methods and AFLP fingerprinting
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.11.015openalex-snapshot
Untangling the phylogeny of Leandra s.str. (Melastomataceae, Miconieae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.11.020openalex-snapshot
A cryptic species produced by autopolyploidy and subsequent introgression involving Medicago prostrata (Fabaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2017.03.002openalex-snapshot
Evolutionary and domestication history of Cucurbita (pumpkin and squash) species inferred from 44 nuclear loci
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.04.009openalex-snapshot
Gene tree discordance and coalescent methods support ancient intergeneric hybridisation between Dasymaschalon and Friesodielsia (Annonaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2020.106898openalex-snapshot
A multilocus phylogeny of the non-photosynthetic parasitic plant Cistanche (Orobanchaceae) refutes current taxonomy and identifies four major morphologically distinct clades
inferred← citeshttps://doi.org/10.1016/j.ympev.2020.107024openalex-snapshot
Hybridization and cryptic speciation in the Iberian endemic plant genus Phalacrocarpum (Asteraceae-Anthemideae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107238openalex-snapshot
Biogeographic history and environmental niche evolution in the palearctic genus Helianthemum (Cistaceae)
inferred← citeshttps://doi.org/10.1017/s0024282913000297openalex-snapshot
Genetic diversity and species delimitation of the zeorin-containing red-fruited Cladonia species (lichenized Ascomycota) assessed with ITS rDNA and β-tubulin data
inferred← citeshttps://doi.org/10.1038/hdy.2017.7openalex-snapshot
Is homoploid hybrid speciation that rare? An empiricist’s view
inferred← citeshttps://doi.org/10.1038/s41437-022-00571-9openalex-snapshot
Testing assertions of widespread introgressive hybridization in a clade of neotropical toads with low mate selectivity (Rhinella granulosa species group)
inferred← citeshttps://doi.org/10.1080/11263504.2018.1498400openalex-snapshot
Speciation and periodic restricted environments. The case of genus Ononis L. (subsections Natrix and Viscosae )
inferred← citeshttps://doi.org/10.1080/23818107.2025.2608732openalex-snapshot
Linaria almadensis (Plantaginaceae, Antirrhineae): a highly threatened new toadflax endemic to the Tagus mouth cliffs, opposite Lisbon (Portugal)
inferred← citeshttps://doi.org/10.1086/668790openalex-snapshot
A Phylogeny of Toadflaxes ( Linaria Mill.) Based on Nuclear Internal Transcribed Spacer Sequences: Systematic and Evolutionary Consequences
inferred← citeshttps://doi.org/10.1086/694763openalex-snapshot
Reconstructing Species Relationships within the Recently Diversified Genus Odontites Ludw. (Orobanchaceae): Evidence for Extensive Reticulate Evolution
inferred← citeshttps://doi.org/10.1093/aob/mcae087openalex-snapshot
Pleistocene climate oscillations have shaped the expansion and contraction speciation model of the globose Eriosyce sect. Neoporteria cacti in Central Chile
inferred← citeshttps://doi.org/10.1093/aob/mcae205openalex-snapshot
Climatic and edaphic niche shifts during plant radiation in the Mediterranean biodiversity hotspot
inferred← citeshttps://doi.org/10.1093/aob/mct170openalex-snapshot
Hybridization and long-distance colonization at different time scales: towards resolution of long-term controversies in the sweet vernal grasses (Anthoxanthum)
inferred← citeshttps://doi.org/10.1093/aob/mct214openalex-snapshot
Corolla morphology influences diversification rates in bifid toadflaxes (Linaria sect. Versicolores)
inferred← citeshttps://doi.org/10.1093/botlinnean/boaa057openalex-snapshot
Morphological evolution and molecular phylogenetics of the Merostachys clade (Poaceae: Bambusoideae: Bambuseae: Arthrostylidiinae) based on multi-locus plastid sequences
inferred← citeshttps://doi.org/10.1093/botlinnean/boaa071openalex-snapshot
Too many species: morphometrics, molecular phylogenetics and genome structure of a Brazilian species complex inEpidendrum(Laeliinae; Orchidaceae) reveal fewer species than previously thought
inferred← citeshttps://doi.org/10.1093/botlinnean/boab080openalex-snapshot
Nuclear–plastid discordance indicates past introgression in Epidendrum species (Laeliinae: Orchidaceae) with highly variable chromosome numbers
inferred← citeshttps://doi.org/10.1093/gbe/evac107openalex-snapshot
Alternative Modes of Introgression-Mediated Selection Shaped Crop Adaptation to Novel Climates
inferred← citeshttps://doi.org/10.1093/jxb/eraa467openalex-snapshot
Whole plastomes are not enough: phylogenomic and morphometric exploration at multiple demographic levels of the bee orchid clade Ophrys sect. Sphegodes
inferred← citeshttps://doi.org/10.1093/sysbio/syv004openalex-snapshot
Assignment of Homoeologs to Parental Genomes in Allopolyploids for Species Tree Inference, with an Example from Fumaria (Papaveraceae)
inferred← citeshttps://doi.org/10.1093/sysbio/syx062openalex-snapshot
Resolving Recent Plant Radiations: Power and Robustness of Genotyping-by-Sequencing
inferred← citeshttps://doi.org/10.1111/1755-0998.12182openalex-snapshot
Species discrimination in S isyrinchium ( I ridaceae): assessment of DNA barcodes in a taxonomically challenging genus
inferred← citeshttps://doi.org/10.1111/2041-210x.12694openalex-snapshot
A permutation approach for inferring species networks from gene trees in polyploid complexes by minimising deep coalescences
inferred← citeshttps://doi.org/10.1111/2041-210x.12846openalex-snapshot
Detecting hybridization by likelihood calculation of gene tree extra lineages given explicit models
inferred← citeshttps://doi.org/10.1111/bij.12170openalex-snapshot
Hidden diversity ofEuscorpius(Scorpiones: Euscorpiidae) in Greece revealed by multilocus species-delimitation approaches
inferred← citeshttps://doi.org/10.1111/boj.12251openalex-snapshot
Unmasking cryptic species: morphometric and phylogenetic analyses of the Ibero-North African Linaria incarnata complex
inferred← citeshttps://doi.org/10.1111/ddi.12836openalex-snapshot
Topography explains the distribution of genetic diversity in one of the most fragile European hotspots
inferred← citeshttps://doi.org/10.1111/jbi.12267openalex-snapshot
Geographical origins of North American Rhodiola (Crassulaceae) and phylogeography of the western roseroot, Rhodiola integrifolia
inferred← citeshttps://doi.org/10.1111/jbi.12997openalex-snapshot
North‐west Africa as a source and refuge area of plant biodiversity: a case study on Campanula kremeri and Campanula occidentalis
inferred← citeshttps://doi.org/10.1111/jeb.12609openalex-snapshot
Bees explain floral variation in a recent radiation of L inaria
inferred← citeshttps://doi.org/10.1111/jse.12174openalex-snapshot
Using nuclear gene data for plant phylogenetics: Progress and prospects II. Next‐gen approaches
inferred← citeshttps://doi.org/10.1111/jse.12478openalex-snapshot
Out of the Middle East: New phylogenetic insights in the genus Tamarix (Tamaricaceae)
inferred← citeshttps://doi.org/10.1111/jse.12504openalex-snapshot
Worldwide long‐distance dispersal favored by epizoochorous traits in the biogeographic history of Omphalodeae (Boraginaceae)
inferred← citeshttps://doi.org/10.1111/jse.12731openalex-snapshot
Geographical vs. ecological diversification in Carex section Phacocystis (Cyperaceae): Patterns hidden behind a twisted taxonomy
inferred← citeshttps://doi.org/10.1111/mec.12383openalex-snapshot
Past and future demographic dynamics of alpine species: limited genetic consequences despite dramatic range contraction in a plant from the S panish S ierra N evada
inferred← citeshttps://doi.org/10.1111/mec.12518openalex-snapshot
Autecological traits determined two evolutionary strategies in Mediterranean plants during the Q uaternary: low differentiation and range expansion versus geographical speciation in L inaria
inferred← citeshttps://doi.org/10.1111/mec.13189openalex-snapshot
Reticulate evolution and sea‐level fluctuations together drove species diversification of slipper orchids ( P aphiopedilum) in S outh‐ E ast A sia
inferred← citeshttps://doi.org/10.1111/mec.14136openalex-snapshot
Sweet vernal grasses (Anthoxanthum) colonized African mountains along two fronts in the Late Pliocene, followed by secondary contact, polyploidization and local extinction in the Pleistocene
inferred← citeshttps://doi.org/10.1111/njb.01000openalex-snapshot
Molecular phylogeny of the mainly Mediterranean genera Chaenorhinum, Kickxia and Nanorrhinum (Plantaginaceae, tribe Antirrhineae), with focus on taxa in the Flora Iranica region
inferred← citeshttps://doi.org/10.1111/njb.01914openalex-snapshot
Linaria qartobensis sp. nov. (Plantaginaceae) from the southern Iberian Peninsula
inferred← citeshttps://doi.org/10.1111/njb.04022openalex-snapshot
Linaria sagrensis (Plantaginaceae), a new high mountain species from the SE Iberian Peninsula
inferred← citeshttps://doi.org/10.1111/nph.12133openalex-snapshot
An approach to identify putative hybrids in the ‘coalescent stochasticity zone’, as exemplified in the A frican plant genus S treptocarpus ( G esneriaceae)
inferred← citeshttps://doi.org/10.1111/nph.12220openalex-snapshot
Congruence between distribution modelling and phylogeographical analyses reveals Q uaternary survival of a toadflax species ( L inaria elegans) in oceanic climate areas of a mountain ring range
inferred← citeshttps://doi.org/10.1111/nph.15099openalex-snapshot
Phylogenomic analyses reveal a deep history of hybridization and polyploidy in the Neotropical genus Lachemilla (Rosaceae)
inferred← citeshttps://doi.org/10.1111/nph.15654openalex-snapshot
Macroevolutionary dynamics of nectar spurs, a key evolutionary innovation
inferred← citeshttps://doi.org/10.1111/nph.15784openalex-snapshot
‘At the crossroads towards polyploidy’: genomic divergence and extent of homoploid hybridization are drivers for the formation of the ox‐eye daisy polyploid complex (Leucanthemum, Compositae‐Anthemideae)
inferred← citeshttps://doi.org/10.1111/plb.12567openalex-snapshot
Is floral morphology a good predictor of floral visitors to Antirrhineae (snapdragons and relatives)?
inferred← citeshttps://doi.org/10.1111/tpj.70565openalex-snapshot
Historical introgression as a driver of diversification of diploid Picris (Compositae) in the Mediterranean Basin
inferred← citeshttps://doi.org/10.1134/s1021443717050089openalex-snapshot
Biological traits of naturally transgenic plants and their evolutional roles
inferred← citeshttps://doi.org/10.1186/s12870-020-2326-5openalex-snapshot
The low-copy nuclear gene Agt1 as a novel DNA barcoding marker for Bromeliaceae
inferred← citeshttps://doi.org/10.1186/s13059-017-1190-6openalex-snapshot
Genomic history of the origin and domestication of common bean unveils its closest sister species
inferred← citeshttps://doi.org/10.12705/633.18openalex-snapshot
Taxonomy and evolutionary history of Alyssum montanum (Brassicaceae) and related taxa in southwestern Europe and Morocco: Diversification driven by polyploidy, geographic and ecological isolation
inferred← citeshttps://doi.org/10.12705/662.7openalex-snapshot
Different speciation types meet in a Mediterranean genus: The biogeographic history of Cymbalaria (Plantaginaceae)
inferred← citeshttps://doi.org/10.12705/664.7openalex-snapshot
Systematics and phylogeography of the Mediterranean Helichrysum pendulum complex (Compositae) inferred from nuclear and chloroplast DNA and morphometric analyses
inferred← citeshttps://doi.org/10.1371/journal.pone.0050631openalex-snapshot
The Recent Recombinant Evolution of a Major Crop Pathogen, Potato virus Y
inferred← citeshttps://doi.org/10.1371/journal.pone.0050831openalex-snapshot
A Simple 2D Non-Parametric Resampling Statistical Approach to Assess Confidence in Species Identification in DNA Barcoding—An Alternative to Likelihood and Bayesian Approaches
inferred← citeshttps://doi.org/10.1371/journal.pone.0068410openalex-snapshot
A Six Nuclear Gene Phylogeny of Citrus (Rutaceae) Taking into Account Hybridization and Lineage Sorting
inferred← citeshttps://doi.org/10.1371/journal.pone.0113872openalex-snapshot
The Evolutionary Fate of the Horizontally Transferred Agrobacterial Mikimopine Synthase Gene in the Genera Nicotiana and Linaria
inferred← citeshttps://doi.org/10.1371/journal.pone.0178459openalex-snapshot
Peripatric speciation in an endemic Macaronesian plant after recent divergence from a widespread relative
inferred← citeshttps://doi.org/10.1600/036364415x690067openalex-snapshot
The Origin of Oranges: A Multi-locus Phylogeny of Rutaceae Subfamily Aurantioideae
inferred← citeshttps://doi.org/10.24310/abm.v44i0.6679openalex-snapshot
A new species of Linaria sect. Supinae from Sierra de Gredos (Sistema Central mountains, Iberian Peninsula)
inferred← citeshttps://doi.org/10.3120/0024-9637-70.3.126openalex-snapshot
GENOME SKIMMING OF HERBARIUM SPECIMENS REVEALS PHYLOGEOGRAPHIC TRENDS AMONG POPULATIONS OF AN ESTUARINE SEABLITE (CHENOPODIACEAE: SUAEDA ESTEROA)
inferred← citeshttps://doi.org/10.3389/fevo.2021.668281openalex-snapshot
Genome Skimming Reveals Widespread Hybridization in a Neotropical Flowering Plant Radiation
inferred← citeshttps://doi.org/10.3389/fgene.2020.00792openalex-snapshot
Genomics of Evolutionary Novelty in Hybrids and Polyploids
inferred← citeshttps://doi.org/10.3389/fpls.2014.00326openalex-snapshot
Horizontal gene transfer from Agrobacterium to plants
inferred← citeshttps://doi.org/10.3389/fpls.2018.00981openalex-snapshot
Genetic and Historical Colonization Analyses of an Endemic Savanna Tree, Qualea grandiflora, Reveal Ancient Connections Between Amazonian Savannas and Cerrado Core
inferred← citeshttps://doi.org/10.3389/fpls.2019.01416openalex-snapshot
Maximize Resolution or Minimize Error? Using Genotyping-By-Sequencing to Investigate the Recent Diversification of Helianthemum (Cistaceae)
inferred← citeshttps://doi.org/10.3389/fpls.2021.659275openalex-snapshot
Allele Sorting as a Novel Approach to Resolving the Origin of Allotetraploids Using Hyb-Seq Data: A Case Study of the Balkan Mountain Endemic Cardamine barbaraeoides
inferred← citeshttps://doi.org/10.3390/d15030310openalex-snapshot
Phylogeography of Ramalina farinacea (Lichenized Fungi, Ascomycota) in the Mediterranean Basin, Europe, and Macaronesia
inferred← citeshttps://doi.org/10.3390/jof8121279openalex-snapshot
Deep Genotypic Species Delimitation of Aspergillus Section Flavi Isolated from Brazilian Foodstuffs and the Description of Aspergillus annui sp. nov. and Aspergillus saccharicola sp. nov.
inferred← citeshttps://doi.org/10.3767/persoonia.2019.42.04openalex-snapshot
Evaluating methodologies for species delimitation: the mismatch between phenotypes and genotypes in lichenized fungi (Bryoria sect. Implexae, Parmeliaceae)
inferred← citeshttps://doi.org/10.5209/mbot.99209openalex-snapshot
Typification of Linaria badalii (Plantaginaceae, Antirrhineae), and the problem of the original material used to describe the species
inferred← citeshttps://doi.org/10.5598/imafungus.2018.09.01.10openalex-snapshot
Considerations and consequences of allowing DNA sequence data as types of fungal taxa
inferred← citeshttps://doi.org/10.9734/arrb/2014/8230openalex-snapshot
Phylogenetic Networks: A Review of Methods to Display Evolutionary History
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.