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Revelation of Influencing Factors in Overall Codon Usage Bias of Equine Influenza Viruses

https://doi.org/10.1371/journal.pone.0154376

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inferredcites →https://doi.org/10.1007/s11262-008-0296-zopenalex-snapshot

Analysis of synonymous codon usage in classical swine fever virus

inferredcites →https://doi.org/10.1007/s11262-013-0935-xopenalex-snapshot

Genetic analysis of the PB1-F2 gene of equine influenza virus

inferredcites →https://doi.org/10.1016/0022-2836(82)90515-0openalex-snapshot

A simple method for displaying the hydropathic character of a protein

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inferredcites →https://doi.org/10.1016/0378-1119(90)90491-9openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.biochi.2007.02.006openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.biosystems.2005.03.002openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.meegid.2013.01.001openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.virol.2010.08.006openalex-snapshot

Establishment of a cynomolgus macaque model of influenza B virus infection

inferredcites →https://doi.org/10.1016/j.virusres.2003.08.019openalex-snapshot

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Dinucleotide relative abundance extremes: a genomic signature

inferredcites →https://doi.org/10.1016/s0264-410x(02)00254-2openalex-snapshot

Realities and enigmas of human viral influenza: pathogenesis, epidemiology and control

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The influence of translational selection on codon usage in fishes from the family Cyprinidae

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Molecular mechanisms of variation in influenza viruses

inferredcites →https://doi.org/10.1038/nm1201-1306openalex-snapshot

A novel influenza A virus mitochondrial protein that induces cell death

inferredcites →https://doi.org/10.1038/nrg2899openalex-snapshot

Synonymous but not the same: the causes and consequences of codon bias

inferredcites →https://doi.org/10.1042/bst0210841openalex-snapshot

Major codon preference: theme and variations

inferredcites →https://doi.org/10.1046/j.1365-2958.1998.01008.xopenalex-snapshot

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inferredcites →https://doi.org/10.1073/pnas.0810122106openalex-snapshot

Genome rhetoric and the emergence of compositional bias

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Quantitative theory of entropic forces acting on constrained nucleotide sequences applied to viruses

inferredcites →https://doi.org/10.1073/pnas.85.8.2653openalex-snapshot

Directional mutation pressure and neutral molecular evolution.

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Compositional differences within and between eukaryotic genomes

inferredcites →https://doi.org/10.1074/jbc.270.39.22801openalex-snapshot

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inferredcites →https://doi.org/10.1093/acprof:oso/9780198570219.001.0001openalex-snapshot

From Strange Simplicity to Complex Familiarity: A Treatise on Matter, Information, Life and Thought

inferredcites →https://doi.org/10.1093/bioinformatics/bth238openalex-snapshot

INCA: synonymous codon usage analysis and clustering by means of self-organizing map

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The selection-mutation-drift theory of synonymous codon usage.

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inferredcites →https://doi.org/10.1093/nar/14.19.7737openalex-snapshot

Codon usage in regulatory genes in Escherichia coli does not reflect selection for ‘rare’ codons

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The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications

inferredcites →https://doi.org/10.1093/nar/23.8.1350openalex-snapshot

Correlation of GC content with replication timing and repair mechanisms in weakly expressedE.coligenes

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Codon usage tabulated from international DNA sequence databases: status for the year 2000

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DNA methylation and the frequency of CpG in animal DNA

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GtRNAdb: a database of transfer RNA genes detected in genomic sequence

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The neighbor-joining method: a new method for reconstructing phylogenetic trees.

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Evolution of influenza A virus nucleoprotein genes: implications for the origins of H1N1 human and classical swine viruses

inferredcites →https://doi.org/10.1128/jvi.68.5.2889-2897.1994openalex-snapshot

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CAIcal: A combined set of tools to assess codon usage adaptation

inferredcites →https://doi.org/10.1261/rna.2395211openalex-snapshot

Origin of the 1918 pandemic H1N1 influenza A virus as studied by codon usage patterns and phylogenetic analysis

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Host Dependent Evolutionary Patterns and the Origin of 2009 H1N1 Pandemic Influenza

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Patterns of Oligonucleotide Sequences in Viral and Host Cell RNA Identify Mediators of the Host Innate Immune System

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CpG Usage in RNA Viruses: Data and Hypotheses

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Genome-Wide Analysis of Codon Usage and Influencing Factors in Chikungunya Viruses

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Patterns of Evolution and Host Gene Mimicry in Influenza and Other RNA Viruses

inferredcites →https://doi.org/10.21775/cimb.003.091openalex-snapshot

Synonymous Codon Usage in Bacteria

inferredcites →https://doi.org/10.2307/2288582openalex-snapshot

Theory and Applications of Correspondence Analysis.

inferredcites →https://doi.org/10.2307/2531266openalex-snapshot

Theory and Applications of Correspondence Analysis.

inferredcites →https://doi.org/10.3201/eid1810.120214openalex-snapshot

Influenza Virus Infection in Nonhuman Primates

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inferred← citeshttps://doi.org/10.1016/j.jviromet.2019.113806openalex-snapshot

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inferred← citeshttps://doi.org/10.1016/j.ympev.2019.106618openalex-snapshot

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inferred← citeshttps://doi.org/10.1017/s1466252321000050openalex-snapshot

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inferred← citeshttps://doi.org/10.1038/s41426-018-0079-0openalex-snapshot

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inferred← citeshttps://doi.org/10.1038/s41598-023-30875-7openalex-snapshot

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inferred← citeshttps://doi.org/10.1038/s44320-024-00052-7openalex-snapshot

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inferred← citeshttps://doi.org/10.1080/07391102.2017.1343685openalex-snapshot

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inferred← citeshttps://doi.org/10.18677/encibio_2021a7openalex-snapshot

DOENÇAS DE NOTIFICAÇÃO OBRIGATÓRIA DE RELEVÂNCIA EM EQUÍDEOS NO BRASIL

inferred← citeshttps://doi.org/10.2139/ssrn.4808981openalex-snapshot

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inferred← citeshttps://doi.org/10.33073/pjm-2024-036openalex-snapshot

Comprehensive Analysis of Codon Usage Bias in Human Papillomavirus Type 51

inferred← citeshttps://doi.org/10.3389/fgene.2025.1647037openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fimmu.2023.1131647openalex-snapshot

Identification and characterization of codon usage pattern and influencing factors in HFRS-causing hantaviruses

inferred← citeshttps://doi.org/10.3389/fmicb.2018.01941openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fmicb.2019.00886openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fmicb.2020.00655openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fmicb.2020.570131openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fmicb.2021.738082openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fmicb.2025.1665893openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fpls.2024.1396389openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fvets.2022.1021440openalex-snapshot

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inferred← citeshttps://doi.org/10.3389/fvets.2022.1071097openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/agronomy12091990openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/cancers13112739openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/ijms19082397openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/ijms20122881openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/ijms21197129openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/ijms23137441openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/microorganisms12040696openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/pathogens10121649openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/v10110604openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/v11020190openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/v11040331openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/v12090991openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/v13061044openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/v13091847openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/v14050846openalex-snapshot

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inferred← citeshttps://doi.org/10.3390/v17030302openalex-snapshot

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inferred← citeshttps://doi.org/10.35414/akufemubid.1388197openalex-snapshot

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inferred← citeshttps://doi.org/10.5539/jas.v11n4p76openalex-snapshot

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inferred← citeshttps://doi.org/10.57709/13404554openalex-snapshot

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inferred← citeshttps://doi.org/10.5897/ajmr2020.9448openalex-snapshot

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inferred← citeshttps://doi.org/10.7324/jabb.2024.187892openalex-snapshot

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