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The 203 kbp Mitochondrial Genome of the Phytopathogenic Fungus Sclerotinia borealis Reveals Multiple Invasions of Introns and Genomic Duplications

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/yea.1500openalex-snapshot
The mitochondrial genome from the thermal dimorphic fungus Paracoccidioides brasiliensis
inferredcites →https://doi.org/10.1007/bf00312742openalex-snapshot
Homology between mitochondrial DNA of Agaricus bisporus and an internal portion of a linear mitochondrial plasmid of Agaricus bitorquis
inferredcites →https://doi.org/10.1007/bf00334517openalex-snapshot
The complete DNA sequence of the mitochondrial genome of Podospora anserina
inferredcites →https://doi.org/10.1007/bf02208618openalex-snapshot
Plasmid RNA polymerase-like mitochondrial sequences in Agaricus bitorquis
inferredcites →https://doi.org/10.1007/s00239-009-9291-9openalex-snapshot
Molecular Evolution of the mtDNA Encoded rps3 Gene Among Filamentous Ascomycetes Fungi with an Emphasis on the Ophiostomatoid Fungi
inferredcites →https://doi.org/10.1007/s00294-006-0079-9openalex-snapshot
The complete mitochondrial genome of the vascular wilt fungus Verticillium dahliae: a novel gene order for Verticillium and a diagnostic tool for species identification
inferredcites →https://doi.org/10.1007/s00438-004-1050-4openalex-snapshot
Molecular evolution of a mitochondrial polB gene, encoding a family B DNA polymerase, towards the elimination from Agrocybe mitochondrial genomes
inferredcites →https://doi.org/10.1007/s00438-005-1133-xopenalex-snapshot
Identification and distribution of sequences having similarity to mitochondrial plasmids in mitochondrial genomes of filamentous fungi
inferredcites →https://doi.org/10.1007/s004380050994openalex-snapshot
Molecular cloning, sequence and expression of Aa-polB, a mitochondrial gene encoding a family B DNA polymerase from the edible basidiomycete Agrocybe aegerita
inferredcites →https://doi.org/10.1007/s10267-009-0013-3openalex-snapshot
Mycelial growth of the snow mold fungus, Sclerotinia borealis, improved at low water potentials: an adaption to frozen environment
inferredcites →https://doi.org/10.1016/j.fgb.2004.07.003openalex-snapshot
The analysis of the complete mitochondrial genome of Lecanicillium muscarium (synonym Verticillium lecanii) suggests a minimum common gene organization in mtDNAs of Sordariomycetes: phylogenetic implications
inferredcites →https://doi.org/10.1016/j.fgb.2008.06.005openalex-snapshot
Comparative genomics of the oxidative phosphorylation system in fungi
inferredcites →https://doi.org/10.1016/j.fgb.2009.07.005openalex-snapshot
The Cryphonectria parasitica mitochondrial rns gene: Plasmid-like elements, introns and homing endonucleases
inferredcites →https://doi.org/10.1016/j.fgb.2013.01.009openalex-snapshot
The 135 kbp mitochondrial genome of Agaricus bisporus is the largest known eukaryotic reservoir of group I introns and plasmid-related sequences
inferredcites →https://doi.org/10.1016/j.fgb.2013.11.001openalex-snapshot
Comparative analysis of mitochondrial genomes from closely related Rhynchosporium species reveals extensive intron invasion
inferredcites →https://doi.org/10.1016/j.funbio.2012.04.013openalex-snapshot
Mitochondrial genomes from the lichenized fungi Peltigera membranacea and Peltigera malacea: Features and phylogeny
inferredcites →https://doi.org/10.1016/j.jbiotec.2012.12.010openalex-snapshot
Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14
inferredcites →https://doi.org/10.1016/j.mib.2004.08.008openalex-snapshot
Evolution of the mitochondrial genome: protist connections to animals, fungi and plants
inferredcites →https://doi.org/10.1016/j.mib.2010.09.003openalex-snapshot
Mitochondrial inheritance in fungi
inferredcites →https://doi.org/10.1016/j.mycres.2008.01.016openalex-snapshot
Mitochondrial gene sequences alone or combined with ITS region sequences provide firm molecular criteria for the classification of Lecanicillium species
inferredcites →https://doi.org/10.1016/j.mycres.2008.04.014openalex-snapshot
The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109kb in size and contains a stable integrated plasmid
inferredcites →https://doi.org/10.1016/j.str.2010.12.003openalex-snapshot
Homing Endonucleases: From Microbial Genetic Invaders to Reagents for Targeted DNA Modification
inferredcites →https://doi.org/10.1016/j.tig.2003.10.012openalex-snapshot
Mitochondrial genomes: anything goes
inferredcites →https://doi.org/10.1016/j.ympev.2004.11.007openalex-snapshot
Performance of four ribosomal DNA regions to infer higher-level phylogenetic relationships of inoperculate euascomycetes (Leotiomyceta)
inferredcites →https://doi.org/10.1017/s095375620500376xopenalex-snapshot
Optional mitochondrial introns and evidence for a homing-endonuclease gene in the mtDNA rnl gene in Ophiostoma ulmi s. lat.
inferredcites →https://doi.org/10.1046/j.1365-294x.2003.02063.xopenalex-snapshot
The incomplete natural history of mitochondria
inferredcites →https://doi.org/10.1073/pnas.96.24.13880openalex-snapshot
Recurrent invasion and extinction of a selfish gene
inferredcites →https://doi.org/10.1093/bioinformatics/btp348openalex-snapshot
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
inferredcites →https://doi.org/10.1093/molbev/msm241openalex-snapshot
Reevaluation of the cox1 Group I Intron in Araceae and Angiosperms Indicates a History Dominated by Loss rather than Horizontal Transfer
inferredcites →https://doi.org/10.1093/molbev/msp145openalex-snapshot
Genes within Genes: Multiple LAGLIDADG Homing Endonucleases Target the Ribosomal Protein S3 Gene Encoded within an rnl Group I Intron of Ophiostoma and Related Taxa
inferredcites →https://doi.org/10.1093/molbev/msr121openalex-snapshot
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
inferredcites →https://doi.org/10.1093/nar/18.17.5027openalex-snapshot
A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon
inferredcites →https://doi.org/10.1093/nar/26.1.138openalex-snapshot
The Organelle Genome Database Project (GOBASE)
inferredcites →https://doi.org/10.1093/nar/gkg264openalex-snapshot
Evolution of monoblepharidalean fungi based on complete mitochondrial genome sequences
inferredcites →https://doi.org/10.1093/nar/gkn819openalex-snapshot
GOBASE: an organelle genome database
inferredcites →https://doi.org/10.1093/oso/9780199636341.003.0002openalex-snapshot
Total DNA isolation
inferredcites →https://doi.org/10.1101/gr.2289704openalex-snapshot
Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements
inferredcites →https://doi.org/10.1111/1574-6968.12387openalex-snapshot
Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogenRhizoctonia solaniAG-3
inferredcites →https://doi.org/10.1111/j.1574-6968.2007.01048.xopenalex-snapshot
The mitochondrial genome of the Basidiomycete fungusPleurotus ostreatus(oyster mushroom)
inferredcites →https://doi.org/10.1126/science.283.5407.1476openalex-snapshot
Mitochondrial Evolution
inferredcites →https://doi.org/10.1128/aem.67.4.1739-1743.2001openalex-snapshot
Duplication of a Truncated Paralog of the Family B DNA Polymerase Gene Aa-polB in the Agrocybe aegerita Mitochondrial Genome
inferredcites →https://doi.org/10.1128/mmbr.59.4.673-685.1995openalex-snapshot
Natural plasmids of filamentous fungi
inferredcites →https://doi.org/10.1186/1471-2164-10-238openalex-snapshot
Recent dermatophyte divergence revealed by comparative and phylogenetic analysis of mitochondrial genomes
inferredcites →https://doi.org/10.1186/1471-2164-13-166openalex-snapshot
Mitochondrial genome evolution in species belonging to the Phialocephala fortinii s.l. - Acephala applanata species complex
inferredcites →https://doi.org/10.1261/rna.5880403openalex-snapshot
Mitochondrial RNase P RNAs in ascomycete fungi: Lineage-specific variations in RNA secondary structure
inferredcites →https://doi.org/10.1371/journal.pone.0014048openalex-snapshot
The Agaricus bisporus cox1 Gene: The Longest Mitochondrial Gene and the Largest Reservoir of Mitochondrial Group I Introns
inferredcites →https://doi.org/10.1371/journal.pone.0038654openalex-snapshot
Phylogenetic Analysis of the Complete Mitochondrial Genome of Madurella mycetomatis Confirms Its Taxonomic Position within the Order Sordariales
inferredcites →https://doi.org/10.1371/journal.pone.0074792openalex-snapshot
Characterization and Phylogenetic Analysis of the Mitochondrial Genome of Glarea lozoyensis Indicates High Diversity within the Order Helotiales
inferredcites →https://doi.org/10.3852/mycologia.98.6.1018openalex-snapshot
A five-gene phylogeny of Pezizomycotina

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Assembly and comparative analysis of the complete mitochondrial genome of Daedaleopsis sinensis (Polyporaceae, Basidiomycota), contributing to understanding fungal evolution and ecological functions
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Comparative analysis of the complete mitochondrial genomes of four cordyceps fungi
inferred← citeshttps://doi.org/10.1007/978-3-031-81904-9_6openalex-snapshot
Your Death, My Life: Understanding the Success Story of Necrotrophic Plant Pathogenic Ascomycota
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Mitochondrial genome and diverse inheritance patterns in Pleurotus pulmonarius
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The mitogenomes of two saprophytic Boletales species ( Coniophora ) reveals intron dynamics and accumulation of plasmid-derived and non-conserved genes
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Comparative genomics of maize ear rot pathogens reveals expansion of carbohydrate-active enzymes and secondary metabolism backbone genes in Stenocarpella maydis
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The complete mitochondrial genomes of two model ectomycorrhizal fungi (Laccaria): features, intron dynamics and phylogenetic implications
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The mitochondrial genome of Morchella importuna (272.2 kb) is the largest among fungi and contains numerous introns, mitochondrial non-conserved open reading frames and repetitive sequences
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The 206 kbp mitochondrial genome of Phanerochaete carnosa reveals dynamics of introns, accumulation of repeat sequences and plasmid-derived genes
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Comparative mitogenomics of Agaricomycetes: Diversity, abundance, impact and coding potential of putative open-reading frames
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Functional annotation and comparative analysis of four Botrytis cinerea mitogenomes reported from Punjab, Pakistan
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The mitochondrial genome of Endoconidiophora resinifera is intron rich
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Characterization of the mitochondrial genome of the pathogenic fungus Scytalidium auriculariicola (Leotiomycetes) and insights into its phylogenetics
inferred← citeshttps://doi.org/10.1038/s41598-020-70611-zopenalex-snapshot
First characterization of the complete mitochondrial genome of fungal plant-pathogen Monilinia laxa which represents the mobile intron rich structure
inferred← citeshttps://doi.org/10.1038/s41598-021-93481-5openalex-snapshot
The mitochondrial genome of the grape powdery mildew pathogen Erysiphe necator is intron rich and exhibits a distinct gene organization
inferred← citeshttps://doi.org/10.1038/srep13892openalex-snapshot
Complete mitochondrial genome of the medicinal fungus Ophiocordyceps sinensis
inferred← citeshttps://doi.org/10.1080/23802359.2016.1219625openalex-snapshot
Complete mitochondrial genome sequence of the phytopathogenic fungi Sclerotinia sclerotiorum JX-21
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The complete mitochondrial genome of Pseudofabraea citricarpa (Dermateaceae: Helotiales) causing Citrus target spot
inferred← citeshttps://doi.org/10.1080/23802359.2024.2403411openalex-snapshot
Complete mitochondrial genome sequence of the white root rot pathogen Dematophora necatrix (Xylariaceae: Xylariales)
inferred← citeshttps://doi.org/10.1080/24701394.2019.1580272openalex-snapshot
Intron-encoded ribosomal proteins and N-acetyltransferases within the mitochondrial genomes of fungi: here today, gone tomorrow?
inferred← citeshttps://doi.org/10.1093/gbe/evaa126openalex-snapshot
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inferred← citeshttps://doi.org/10.1093/gbe/evz181openalex-snapshot
Evidence of Extensive Intraspecific Noncoding Reshuffling in a 169-kb Mitochondrial Genome of a Basidiomycetous Fungus
inferred← citeshttps://doi.org/10.1093/molbev/msaf076openalex-snapshot
An Alternative Self-Splicing Intron Lifecycle Revealed by Dynamic Intron Turnover in Epichloë Endophyte Mitochondrial Genomes
inferred← citeshttps://doi.org/10.1093/molbev/msv127openalex-snapshot
Extensive Horizontal Transfer and Homologous Recombination Generate Highly Chimeric Mitochondrial Genomes in Yeast
inferred← citeshttps://doi.org/10.1094/phyto-12-19-0478-aopenalex-snapshot
Genome Sequence of the Chestnut Blight Fungus Cryphonectria parasitica EP155: A Fundamental Resource for an Archetypical Invasive Plant Pathogen
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Complete Mitochondrial Genome Sequence of the Pezizomycete Pyronema confluens
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Intron Derived Size Polymorphism in the Mitochondrial Genomes of Closely Related Chrysoporthe Species
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Complete mitogenome sequence of Ricasolia amplissima (Lobariaceae) reveals extensive mitochondrial DNA rearrangement within the Peltigerales (lichenized ascomycetes)
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Trichoderma Koningiopsis (Hypocreaceae) has the Smallest Mitogenome of the Genus Trichoderma
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The First Mitochondrial Genome of Ciborinia camelliae and Its Position in the Sclerotiniaceae Family
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The 287,403 bp Mitochondrial Genome of Ectomycorrhizal Fungus Tuber calosporum Reveals Intron Expansion, tRNA Loss, and Gene Rearrangement
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Comprehensive analysis of the mitochondrial genome in lichen genus Xanthoparmelia: genetic diversity, intron dynamics, and evolutionary dynamics
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Diversity, geographical distribution and environmental adaptations of snow molds
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