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Comparison of the Mitochondrial Genome Sequences of Six Annulohypoxylon stygium Isolates Suggests Short Fragment Insertions as a Potential Factor Leading to Larger Genomic Size
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Preferential recombination between GC clusters in yeast mitochondrial DNA.
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Group II twintron: an intron within an intron in a chloroplast cytochrome b‐559 gene.
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Algorithms and Thermodynamics for RNA Secondary Structure Prediction: A Practical Guide
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Highly conserved GC-rich palindromic DNA sequences flank tRNA genes in Neurospora crassa mitochondria
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Small repeated sequences and the structure of plant mitochondrial genomes
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The GC clusters of the mitochondrial genome of yeast and their evolutionary origin
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Enhancing of sugar cane bagasse hydrolysis by Annulohypoxylon stygium glycohydrolases
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A Eukaryote without a Mitochondrial Organelle
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The Cryphonectria parasitica mitochondrial rns gene: Plasmid-like elements, introns and homing endonucleases
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Comparative analysis of Fusarium mitochondrial genomes reveals a highly variable region that encodes an exceptionally large open reading frame
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The mtDNA rns gene landscape in the Ophiostomatales and other fungal taxa: Twintrons, introns, and intron-encoded proteins
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Comparative analysis of mitochondrial genomes from closely related Rhynchosporium species reveals extensive intron invasion
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Comparison of mitochondrial genomes provides insights into intron dynamics and evolution in the caterpillar fungus Cordyceps militaris
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Evolutionary dynamics of introns and their open reading frames in the U7 region of the mitochondrial rnl gene in species of Ceratocystis
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Mitochondrial genome of Suberites domuncula: Palindromes and inverted repeats are abundant in non-coding regions
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Small inverted repeats drive mitochondrial genome evolution in Lake Baikal sponges
inferredcites →https://doi.org/10.1016/j.jphotobiol.2017.11.018openalex-snapshot
Photoprotective potential of metabolites isolated from algae-associated fungi Annulohypoxylon stygium
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Mitochondrial introns: a critical view
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Group I twintrons: Genetic elements in myxomycete and schizopyrenid amoeboflagellate ribosomal DNAs
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Molecular analysis of the split cox1 gene from the Basidiomycota Agrocybe aegerita: relationship of its introns with homologous Ascomycota introns and divergence levels from common ancestral copies
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Evolution of mitochondrial gene content: gene loss and transfer to the nucleus
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Genome signature comparisons among prokaryote, plasmid, and mitochondrial DNA
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Molecular phylogeny of Hypoxylon and closely related genera
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SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
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Rapid Proliferation of Repetitive Palindromic Elements in mtDNA of the Endemic Baikalian Sponge Lubomirskia baicalensis
inferredcites →https://doi.org/10.1093/molbev/msw054openalex-snapshot
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
inferredcites →https://doi.org/10.1093/nar/21.10.2389openalex-snapshot
A complex twintron is excised as four individual introns
inferredcites →https://doi.org/10.1093/nar/gkg264openalex-snapshot
Evolution of monoblepharidalean fungi based on complete mitochondrial genome sequences
inferredcites →https://doi.org/10.1093/nar/gkv279openalex-snapshot
The EMBL-EBI bioinformatics web and programmatic tools framework
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026274openalex-snapshot
Double-Hairpin Elements in the Mitochondrial DNA of Allomyces: Evidence for Mobility
inferredcites →https://doi.org/10.1094/phyto-77-669openalex-snapshot
Potential Applications of Random DNA Probes and Restriction Fragment Length Polymorphisms in the Taxonomy of the Fusaria
inferredcites →https://doi.org/10.1096/fasebj.7.1.8422962openalex-snapshot
Group I and group II introns.
inferredcites →https://doi.org/10.1101/cshperspect.a003616openalex-snapshot
Group II Introns: Mobile Ribozymes that Invade DNA
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Canu: scalable and accurate long-read assembly via adaptive k -mer weighting and repeat separation
inferredcites →https://doi.org/10.1111/1574-6968.12387openalex-snapshot
Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogenRhizoctonia solaniAG-3
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Comparative analysis of mitochondrial genomes of Rhizophagus irregularis – syn. Glomus irregulare – reveals a polymorphism induced by variability generating elements
inferredcites →https://doi.org/10.1111/j.1574-6968.2010.01979.xopenalex-snapshot
The mitochondrial genome of the wood-degrading basidiomycete Trametes cingulata
inferredcites →https://doi.org/10.1128/genomea.00355-16openalex-snapshot
Complete Mitochondrial Genome Sequence of the Pezizomycete Pyronema confluens
inferredcites →https://doi.org/10.1139/b95-325openalex-snapshot
Secondary metabolites and systematic arrangement within the Xylariaceae
inferredcites →https://doi.org/10.1146/annurev.bi.64.070195.002251openalex-snapshot
STRUCTURE AND ACTIVITIES OF GROUP II INTRONS
inferredcites →https://doi.org/10.1186/1471-2148-6-94openalex-snapshot
Inteins, introns, and homing endonucleases: recent revelations about the life cycle of parasitic genetic elements.
inferredcites →https://doi.org/10.1186/1471-2148-9-303openalex-snapshot
Conservation of intron and intein insertion sites: implications for life histories of parasitic genetic elements
inferredcites →https://doi.org/10.1186/1471-2164-13-698openalex-snapshot
Sequencing of mitochondrial genomes of nine Aspergillus and Penicillium species identifies mobile introns and accessory genes as main sources of genome size variability
inferredcites →https://doi.org/10.1261/rna.2184010openalex-snapshot
A group II intron encodes a functional LAGLIDADG homing endonuclease and self-splices under moderate temperature and ionic conditions
inferredcites →https://doi.org/10.1371/journal.pone.0049551openalex-snapshot
The Mitochondrial LSU rRNA Group II Intron of Ustilago maydis Encodes an Active Homing Endonuclease Likely Involved in Intron Mobility
inferredcites →https://doi.org/10.1371/journal.pone.0054529openalex-snapshot
Fungi in Thailand: A Case Study of the Efficacy of an ITS Barcode for Automatically Identifying Species within the Annulohypoxylon and Hypoxylon Genera
inferredcites →https://doi.org/10.1371/journal.pone.0097141openalex-snapshot
Mitochondrial Genome of Phlebia radiata Is the Second Largest (156 kbp) among Fungi and Features Signs of Genome Flexibility and Recent Recombination Events
inferredcites →https://doi.org/10.1371/journal.pone.0107536openalex-snapshot
The 203 kbp Mitochondrial Genome of the Phytopathogenic Fungus Sclerotinia borealis Reveals Multiple Invasions of Introns and Genomic Duplications
inferredcites →https://doi.org/10.1371/journal.pone.0156104openalex-snapshot
Intron Derived Size Polymorphism in the Mitochondrial Genomes of Closely Related Chrysoporthe Species
inferredcites →https://doi.org/10.1615/intjmedmushrooms.v18.i3.80openalex-snapshot
Morphological and Molecular Analysis Identifies the Associated Fungus ("Xianghui") of the Medicinal White Jelly Mushroom, Tremella fuciformis, as Annulohypoxylon stygium
inferredcites →https://doi.org/10.3389/fmicb.2017.01422openalex-snapshot
SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis
inferredcites →https://doi.org/10.3390/ijms17071049openalex-snapshot
Analysis of the Mitochondrial Genome in Hypomyces aurantius Reveals a Novel Twintron Complex in Fungi
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Molecular phylogeny of Hypoxylon and closely related genera
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Mitogenome of a stink worm (Annelida: Travisiidae) includes degenerate group II intron that is also found in five congeneric species
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