On the public citation graph

Structural Basis for Broad HIV-1 Neutralization by a Novel MPER-Specific Human Broadly Neutralizing Antibody

0 signed · 93 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/ange.201508421openalex-extracted

Trimerization of the HIV Transmembrane Domain in Lipid Bilayers Modulates Broadly Neutralizing Antibody Binding

inferredcites →https://doi.org/10.1002/anie.201508421openalex-extracted

Trimerization of the HIV Transmembrane Domain in Lipid Bilayers Modulates Broadly Neutralizing Antibody Binding

inferredcites →https://doi.org/10.1002/jcc.20289openalex-extracted

Scalable molecular dynamics with NAMD

inferredcites →https://doi.org/10.1002/jcc.20945openalex-extracted

CHARMM‐GUI: A web‐based graphical user interface for CHARMM

inferredcites →https://doi.org/10.1007/978-1-59745-170-3_26openalex-extracted

Measuring HIV Neutralization in a Luciferase Reporter Gene Assay

inferredcites →https://doi.org/10.1007/s13238-011-1051-0openalex-extracted

Conserved arginine residue in the membrane-spanning domain of HIV-1 gp41 is required for efficient membrane fusion

inferredcites →https://doi.org/10.1016/0021-9991(83)90014-1openalex-extracted

Rattle: A “velocity” version of the shake algorithm for molecular dynamics calculations

inferredcites →https://doi.org/10.1016/0263-7855(96)00018-5openalex-extracted

VMD: Visual molecular dynamics

inferredcites →https://doi.org/10.1016/j.cell.2013.03.018openalex-extracted

Somatic Mutations of the Immunoglobulin Framework Are Generally Required for Broad and Potent HIV-1 Neutralization

inferredcites →https://doi.org/10.1016/j.cell.2016.05.024openalex-extracted

Engineered Bispecific Antibodies with Exquisite HIV-1-Neutralizing Activity

inferredcites →https://doi.org/10.1016/j.chom.2014.07.003openalex-extracted

HIV-1 Envelope gp41 Antibodies Can Originate from Terminal Ileum B Cells that Share Cross-Reactivity with Commensal Bacteria

inferredcites →https://doi.org/10.1016/j.immuni.2004.12.011openalex-extracted

Broadly Neutralizing Anti-HIV Antibody 4E10 Recognizes a Helical Conformation of a Highly Conserved Fusion-Associated Motif in gp41

inferredcites →https://doi.org/10.1016/j.immuni.2014.04.009openalex-extracted

Broadly Neutralizing HIV Antibodies Define a Glycan-Dependent Epitope on the Prefusion Conformation of gp41 on Cleaved Envelope Trimers

inferredcites →https://doi.org/10.1016/j.immuni.2015.12.001openalex-extracted

Crystallographic Identification of Lipid as an Integral Component of the Epitope of HIV Broadly Neutralizing Antibody 4E10

inferredcites →https://doi.org/10.1016/j.immuni.2018.04.029openalex-extracted

HIV-1 Vaccines Based on Antibody Identification, B Cell Ontogeny, and Epitope Structure

inferredcites →https://doi.org/10.1016/j.immuni.2019.02.008openalex-extracted

Longitudinal Analysis Reveals Early Development of Three MPER-Directed Neutralizing Antibody Lineages from an HIV-1-Infected Individual

inferredcites →https://doi.org/10.1016/j.jim.2007.09.017openalex-extracted

Efficient generation of monoclonal antibodies from single human B cells by single cell RT-PCR and expression vector cloning

inferredcites →https://doi.org/10.1021/ct500874popenalex-extracted

Multiple-Replica Strategies for Free-Energy Calculations in NAMD: Multiple-Walker Adaptive Biasing Force and Walker Selection Rules

inferredcites →https://doi.org/10.1021/jacs.7b10245openalex-extracted

Tilted, Uninterrupted, Monomeric HIV-1 gp41 Transmembrane Helix from Residual Dipolar Couplings

inferredcites →https://doi.org/10.1021/jacs.8b04010openalex-extracted

Oligomeric Structure and Three-Dimensional Fold of the HIV gp41 Membrane-Proximal External Region and Transmembrane Domain in Phospholipid Bilayers

inferredcites →https://doi.org/10.1021/jp101759qopenalex-extracted

Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types

inferredcites →https://doi.org/10.1021/jp506633nopenalex-extracted

The Adaptive Biasing Force Method: Everything You Always Wanted To Know but Were Afraid To Ask

inferredcites →https://doi.org/10.1021/jp973084fopenalex-extracted

All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins

inferredcites →https://doi.org/10.1038/387426a0openalex-extracted

Atomic structure of the ectodomain from HIV-1 gp41

inferredcites →https://doi.org/10.1038/nature09385openalex-extracted

Polyreactivity increases the apparent affinity of anti-HIV antibodies by heteroligation

inferredcites →https://doi.org/10.1038/nature10373openalex-extracted

Broad neutralization coverage of HIV by multiple highly potent antibodies

inferredcites →https://doi.org/10.1038/nature11544openalex-extracted

Broad and potent neutralization of HIV-1 by a gp41-specific human antibody

inferredcites →https://doi.org/10.1038/nature13601openalex-extracted

Broad and potent HIV-1 neutralization by a human antibody that binds the gp41–gp120 interface

inferredcites →https://doi.org/10.1038/nature13808openalex-extracted

Structure and immune recognition of trimeric pre-fusion HIV-1 Env

inferredcites →https://doi.org/10.1038/ncomms10844openalex-extracted

Elimination of HIV-1-infected cells by broadly neutralizing antibodies

inferredcites →https://doi.org/10.1038/nsb812openalex-extracted

Structure of human phosphatidylcholine transfer protein in complex with its ligand

inferredcites →https://doi.org/10.1038/nsmb.1455openalex-extracted

Mechanics of membrane fusion

inferredcites →https://doi.org/10.1038/nsmb.2922openalex-extracted

Stapled HIV-1 peptides recapitulate antigenic structures and engage broadly neutralizing antibodies

inferredcites →https://doi.org/10.1038/s41590-018-0235-7openalex-extracted

Recent progress in broadly neutralizing antibodies to HIV

inferredcites →https://doi.org/10.1038/srep20995openalex-extracted

Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase

inferredcites →https://doi.org/10.1038/srep38177openalex-extracted

Structural basis for broad neutralization of HIV-1 through the molecular recognition of 10E8 helical epitope at the membrane interface

inferredcites →https://doi.org/10.1063/1.445869openalex-extracted

Comparison of simple potential functions for simulating liquid water

inferredcites →https://doi.org/10.1063/1.463137openalex-extracted

Reversible multiple time scale molecular dynamics

inferredcites →https://doi.org/10.1063/1.4914027openalex-extracted

Analyzing surface plasmon resonance data: Choosing a correct biphasic model for interpretation

inferredcites →https://doi.org/10.1073/pnas.0511136103openalex-extracted

The HIV lipidome: A raft with an unusual composition

inferredcites →https://doi.org/10.1073/pnas.0800255105openalex-extracted

A fusion-intermediate state of HIV-1 gp41 targeted by broadly neutralizing antibodies

inferredcites →https://doi.org/10.1073/pnas.0908713106openalex-extracted

Role of HIV membrane in neutralization by two broadly neutralizing antibodies

inferredcites →https://doi.org/10.1073/pnas.0909680107openalex-extracted

Aromatic residues at the edge of the antibody combining site facilitate viral glycoprotein recognition through membrane interactions

inferredcites →https://doi.org/10.1073/pnas.0912381107openalex-extracted

Prolonged exposure of the HIV-1 gp41 membrane proximal region with L669S substitution

inferredcites →https://doi.org/10.1073/pnas.1818200116openalex-extracted

Thermodynamically reversible paths of the first fusion intermediate reveal an important role for membrane anchors of fusion proteins

inferredcites →https://doi.org/10.1074/jbc.m114.569566openalex-extracted

A Fusion Intermediate gp41 Immunogen Elicits Neutralizing Antibodies to HIV-1

inferredcites →https://doi.org/10.1074/jbc.m115.644351openalex-extracted

The Atomic Structure of the HIV-1 gp41 Transmembrane Domain and Its Connection to the Immunogenic Membrane-proximal External Region

inferredcites →https://doi.org/10.1080/09687860400017784openalex-extracted

Class I and class II viral fusion protein structures reveal similar principles in membrane fusion (Review)

inferredcites →https://doi.org/10.1084/jem.20110363openalex-extracted

Initial antibodies binding to HIV-1 gp41 in acutely infected subjects are polyreactive and highly mutated

inferredcites →https://doi.org/10.1089/08892220152741450openalex-extracted

A Potent Cross-Clade Neutralizing Human Monoclonal Antibody against a Novel Epitope on gp41 of Human Immunodeficiency Virus Type 1

inferredcites →https://doi.org/10.1089/aid.2014.5312.abstractopenalex-extracted

Anti-MPER Antibodies with Heterogeneous Neutralization Capacity Are Detectable in Most Untreated HIV Infected Individuals

inferredcites →https://doi.org/10.1093/nar/18.20.6097openalex-extracted

Sequence logos: a new way to display consensus sequences

inferredcites →https://doi.org/10.1107/97809553602060000832openalex-extracted

Integration, scaling, space-group assignment and post refinement

inferredcites →https://doi.org/10.1107/s0907444909047374openalex-extracted

Integration, scaling, space-group assignment and post-refinement

inferredcites →https://doi.org/10.1107/s0907444996012255openalex-extracted

Refinement of Macromolecular Structures by the Maximum-Likelihood Method

inferredcites →https://doi.org/10.1126/science.1086907openalex-extracted

Predominant Autoantibody Production by Early Human B Cell Precursors

inferredcites →https://doi.org/10.1126/science.1111781openalex-extracted

Cardiolipin Polyspecific Autoreactivity in Two Broadly Neutralizing HIV-1 Antibodies

inferredcites →https://doi.org/10.1126/science.1207227openalex-extracted

Sequence and Structural Convergence of Broad and Potent HIV Antibodies That Mimic CD4 Binding

inferredcites →https://doi.org/10.1126/science.aad2450openalex-extracted

Cryo-EM structure of a native, fully glycosylated, cleaved HIV-1 envelope trimer

inferredcites →https://doi.org/10.1126/science.aaf7066openalex-extracted

Structural basis for membrane anchoring of HIV-1 envelope spike

inferredcites →https://doi.org/10.1126/sciimmunol.aag0851openalex-extracted

Immune perturbations in HIV-1–infected individuals who make broadly neutralizing antibodies

inferredcites →https://doi.org/10.1126/sciimmunol.aal2200openalex-extracted

Potent and broad HIV-neutralizing antibodies in memory B cells and plasma

inferredcites →https://doi.org/10.1126/scitranslmed.3008992openalex-extracted

Neutralizing antibodies to HIV-1 envelope protect more effectively in vivo than those to the CD4 receptor

inferredcites →https://doi.org/10.1128/jvi.00129-15openalex-extracted

Anti-V3/Glycan and Anti-MPER Neutralizing Antibodies, but Not Anti-V2/Glycan Site Antibodies, Are Strongly Associated with Greater Anti-HIV-1 Neutralization Breadth and Potency

inferredcites →https://doi.org/10.1128/jvi.00154-10openalex-extracted

Anti-gp41 Antibodies Cloned from HIV-Infected Patients with Broadly Neutralizing Serologic Activity

inferredcites →https://doi.org/10.1128/jvi.00656-09openalex-extracted

Utilization of Immunoglobulin G Fc Receptors by Human Immunodeficiency Virus Type 1: a Specific Role for Antibodies against the Membrane-Proximal External Region of gp41

inferredcites →https://doi.org/10.1128/jvi.00756-11openalex-extracted

Direct Antibody Access to the HIV-1 Membrane-Proximal External Region Positively Correlates with Neutralization Sensitivity

inferredcites →https://doi.org/10.1128/jvi.02257-09openalex-extracted

Relationship between Antibody 2F5 Neutralization of HIV-1 and Hydrophobicity of Its Heavy Chain Third Complementarity-Determining Region

inferredcites →https://doi.org/10.1128/jvi.02357-09openalex-extracted

Ablation of the Complementarity-Determining Region H3 Apex of the Anti-HIV-1 Broadly Neutralizing Antibody 2F5 Abrogates Neutralizing Capacity without Affecting Core Epitope Binding

inferredcites →https://doi.org/10.1128/jvi.02664-13openalex-extracted

Mechanism of HIV-1 Neutralization by Antibodies Targeting a Membrane-Proximal Region of gp41

inferredcites →https://doi.org/10.1128/jvi.03136-14openalex-extracted

Improving Neutralization Potency and Breadth by Combining Broadly Reactive HIV-1 Antibodies Targeting Major Neutralization Epitopes

inferredcites →https://doi.org/10.1128/jvi.03635-14openalex-extracted

Vaccine-Induced Linear Epitope-Specific Antibodies to Simian Immunodeficiency Virus SIVmac239 Envelope Are Distinct from Those Induced to the Human Immunodeficiency Virus Type 1 Envelope in Nonhuman Primates

inferredcites →https://doi.org/10.1128/jvi.05363-11openalex-extracted

Polyclonal B Cell Responses to Conserved Neutralization Epitopes in a Subset of HIV-1-Infected Individuals

inferredcites →https://doi.org/10.1128/jvi.05489-11openalex-extracted

Binding of Anti-Membrane-Proximal gp41 Monoclonal Antibodies to CD4-Liganded and -Unliganded Human Immunodeficiency Virus Type 1 and Simian Immunodeficiency Virus Virions

inferredcites →https://doi.org/10.1128/jvi.75.22.10892-10905.2001openalex-extracted

Broadly Neutralizing Antibodies Targeted to the Membrane-Proximal External Region of Human Immunodeficiency Virus Type 1 Glycoprotein gp41

inferredcites →https://doi.org/10.1186/1742-4690-11-44openalex-extracted

Anti-MPER antibodies with heterogeneous neutralization capacity are detectable in most untreated HIV-1 infected individuals

inferredcites →https://doi.org/10.1371/journal.pone.0075665openalex-extracted

Plasma IgG to Linear Epitopes in the V2 and V3 Regions of HIV-1 gp120 Correlate with a Reduced Risk of Infection in the RV144 Vaccine Efficacy Trial

inferredcites →https://doi.org/10.1371/journal.ppat.1000880openalex-extracted

Crystal Structure of HIV-1 gp41 Including Both Fusion Peptide and Membrane Proximal External Regions

inferredcites →https://doi.org/10.1371/journal.ppat.1000955openalex-extracted

Tetherin Restricts Productive HIV-1 Cell-to-Cell Transmission

inferredcites →https://doi.org/10.1371/journal.ppat.1003202openalex-extracted

A gp41 MPER-specific Llama VHH Requires a Hydrophobic CDR3 for Neutralization but not for Antigen Recognition

inferredcites →https://doi.org/10.1371/journal.ppat.1004403openalex-extracted

Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10

inferredcites →https://doi.org/10.1371/journal.ppat.1005369openalex-extracted

Broadly Neutralizing Antibody Responses in a Large Longitudinal Sub-Saharan HIV Primary Infection Cohort

inferredcites →https://doi.org/10.1371/journal.ppat.1005520openalex-extracted

Optimal Combinations of Broadly Neutralizing Antibodies for Prevention and Treatment of HIV-1 Clade C Infection

inferredcites →https://doi.org/10.1371/journal.ppat.1006148openalex-extracted

Mapping Polyclonal HIV-1 Antibody Responses via Next-Generation Neutralization Fingerprinting

inferredcites →https://doi.org/10.1371/journal.ppat.1006212openalex-extracted

Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design

inferredcites →https://doi.org/10.17615/8tre-9461openalex-extracted

inferredcites →https://doi.org/10.4049/jimmunol.1300770openalex-extracted

Common Tolerance Mechanisms, but Distinct Cross-Reactivities Associated with gp41 and Lipids, Limit Production of HIV-1 Broad Neutralizing Antibodies 2F5 and 4E10

inferredcites →https://doi.org/10.4049/jimmunol.1301285openalex-extracted

Immune Tolerance Negatively Regulates B Cells in Knock-In Mice Expressing Broadly Neutralizing HIV Antibody 4E10

inferredcites →https://doi.org/10.4049/jimmunol.178.7.4424openalex-extracted

The Role of Antibody Polyspecificity and Lipid Reactivity in Binding of Broadly Neutralizing Anti-HIV-1 Envelope Human Monoclonal Antibodies 2F5 and 4E10 to Glycoprotein 41 Membrane Proximal Envelope Epitopes

inferredcites →https://doi.org/10.7554/elife.01456openalex-extracted

Collaboration gets the most out of software

inferredcites →https://doi.org/10.1107/s0021889807021206openalex-snapshot

Phaser crystallographic software

inferredcites →https://doi.org/10.1107/s0907444910007493openalex-snapshot

Features and development of Coot

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.70675/f23b1521z398ez4fe3za54aze6b18e252fe2openalex-snapshot

Les IgA anti VIH-1 protecteurs comme lien entre immunité innée et adaptative : recrutement et activation des cellules effectrices par des IgA anti-gp41 pour éliminer les cellules infectées par le VIH-1 et potentielle coopération avec les IgG

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.